RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 E2F3O00716 465 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 TPST1O60507 370 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 ULK1O75385 1050 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 RGS20O76081 388 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 C22orf31O95567 290 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 ZNF823P16415 610 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 MANFP55145 182 aaKnown RBP5.73□□□□□ -1.49
HERC4-206ENST00000427635 TUBA4AP68366 448 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 TRIM25Q14258 630 aaKnown RBP5.73□□□□□ -1.49
HERC4-206ENST00000427635 OLFML2AQ68BL7 652 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 TMEM126BQ8IUX1 230 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.73□□□□□ -1.49
HERC4-206ENST00000427635 GPR156Q8NFN8 814 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 RNPEPQ9H4A4 650 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 EHD1Q9H4M9 534 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 TMEM134Q9H6X4 195 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 NUDT5Q9UKK9 219 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 TMPRSS11EQ9UL52 423 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 A0A1W2PQJ5 194 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 SH3D21A4FU49 640 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 TLR5O60602 858 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 PGM3O95394 542 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 SERPINA1P01009 418 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 CHN1P15882 459 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 NDUFS1P28331 727 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 MAT2AP31153 395 aaKnown RBP5.72□□□□□ -1.49
HERC4-206ENST00000427635 CLCN7P51798 805 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 TAB1Q15750 504 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 FAM110CQ1W6H9 321 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 INTS5Q6P9B9 1019 aaKnown RBP5.72□□□□□ -1.49
HERC4-206ENST00000427635 RIPOR1Q6ZS17 1223 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 STRADAQ7RTN6 431 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 FSTL5Q8N475 847 aaPredicted RBP5.72□□□□□ -1.49
HERC4-206ENST00000427635 ZNF527Q8NB42 609 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 OR4K17Q8NGC6 315 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 ATOH1Q92858 354 aaPredicted RBP5.72□□□□□ -1.49
HERC4-206ENST00000427635 CD101Q93033 1021 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 BDH2Q9BUT1 245 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 RNF19AQ9NV58 838 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 DZANK1Q9NVP4 752 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 RHBDL2Q9NX52 303 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 PTGFRNQ9P2B2 879 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 TMED5Q9Y3A6 229 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 ADGRA3Q8IWK6 1321 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 CNTNAP5Q8WYK1 1306 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 TTLL8A6PVC2 850 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 A8MU76 341 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 SLC31A1O15431 190 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 HGFP14210 728 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 PECAM1P16284 738 aaPredicted RBP5.72□□□□□ -1.49
HERC4-206ENST00000427635 UGT1A1P22309 533 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 FGFR3P22607 806 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 AMPD1P23109 780 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 PPP3R1P63098 170 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 KCNJ2P63252 427 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 SMAD4Q13485 552 aaKnown RBP5.72□□□□□ -1.49
HERC4-206ENST00000427635 PIN1Q13526 163 aaPredicted RBP5.72□□□□□ -1.49
HERC4-206ENST00000427635 BICRALQ6AI39 1079 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 TRIM40Q6P9F5 258 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 ZER1Q7Z7L7 766 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 CDH24Q86UP0 819 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 FAM126BQ8IXS8 530 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 OXR1Q8N573 874 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 STAG3L4Q8TBR4 150 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 SYN2Q92777 582 aaPredicted RBP5.72□□□□□ -1.49
HERC4-206ENST00000427635 GAL3ST3Q96A11 431 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 KLF6Q99612 283 aaPredicted RBP5.72□□□□□ -1.49
HERC4-206ENST00000427635 SGK2Q9HBY8 427 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 ARHGEF4Q9NR80 690 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 FAM105AQ9NUU6 356 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 CMTM6Q9NX76 183 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 TPRKBQ9Y3C4 175 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 SPIN1Q9Y657 262 aaPredicted RBP5.72□□□□□ -1.49
HERC4-206ENST00000427635 PLA2R1Q13018 1463 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 A0A1B0GTH6 734 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 SMIM35A0A1B0GVV1 85 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 WDR27A2RRH5 827 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 FAM227AF5H4B4 570 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 MAN2B1O00754 1011 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 EIF3HO15372 352 aaKnown RBP eCLIP5.72□□□□□ -1.49
HERC4-206ENST00000427635 SERPINA3P01011 423 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 IFNA6P05013 189 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 LPOP22079 712 aaPredicted RBP5.72□□□□□ -1.49
HERC4-206ENST00000427635 MCL1Q07820 350 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 DUSP4Q13115 394 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 PPTC7Q8NI37 304 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 WNT8BQ93098 351 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 MR1Q95460 341 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 MS4A14Q96JA4 679 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 DGAT2Q96PD7 388 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 FAM111AQ96PZ2 611 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 TBC1D10AQ9BXI6 508 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 GSDMCQ9BYG8 508 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 CDHR5Q9HBB8 845 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 FARSBQ9NSD9 589 aaKnown RBP5.72□□□□□ -1.49
HERC4-206ENST00000427635 GJB4Q9NTQ9 266 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 MALT1Q9UDY8 824 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 SUSD2Q9UGT4 822 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 ZMIZ1Q9ULJ6 1067 aa5.72□□□□□ -1.49
HERC4-206ENST00000427635 COG5Q9UP83 839 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms