RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 HDDC3Q8N4P3 179 aa13.85□□□□□ -0.19
RPL28-202ENST00000426763 CAMKK1Q8N5S9 505 aa13.85□□□□□ -0.19
RPL28-202ENST00000426763 CMASQ8NFW8 434 aaPredicted RBP13.85□□□□□ -0.19
RPL28-202ENST00000426763 DNAJC1Q96KC8 554 aaKnown RBP13.85□□□□□ -0.19
RPL28-202ENST00000426763 MMADHCQ9H3L0 296 aaPredicted RBP13.85□□□□□ -0.19
RPL28-202ENST00000426763 A0A1W2PPM1 405 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 OR10H2O60403 315 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 NUDT14O95848 222 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 GOT2P00505 430 aaKnown RBP13.84□□□□□ -0.19
RPL28-202ENST00000426763 CFHP08603 1231 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 AKT2P31751 481 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 INTS11Q5TA45 600 aaKnown RBP13.84□□□□□ -0.19
RPL28-202ENST00000426763 R3HCC1LQ7Z5L2 792 aaKnown RBP13.84□□□□□ -0.19
RPL28-202ENST00000426763 BADQ92934 168 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 MFSD3Q96ES6 412 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 TMEM237Q96Q45 408 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 VRTNQ9H8Y1 702 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 EXOSC4Q9NPD3 245 aaKnown RBP13.84□□□□□ -0.19
RPL28-202ENST00000426763 CRTAC1Q9NQ79 661 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 HCRTO43612 131 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 ACADSP16219 412 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 TEAD2Q15562 447 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 PDE12Q6L8Q7 609 aaKnown RBP13.84□□□□□ -0.19
RPL28-202ENST00000426763 CHSY3Q70JA7 882 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 CCT7Q99832 543 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 AIF1LQ9BQI0 150 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 BDH2Q9BUT1 245 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 ACAT2Q9BWD1 397 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 SPATS2LQ9NUQ6 558 aaKnown RBP13.84□□□□□ -0.19
RPL28-202ENST00000426763 DNAJC11Q9NVH1 559 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 LEF1Q9UJU2 399 aaPredicted RBP13.84□□□□□ -0.19
RPL28-202ENST00000426763 CHD4Q14839 1912 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 FPGTO14772 594 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 CNPP09543 421 aaKnown RBP13.84□□□□□ -0.19
RPL28-202ENST00000426763 HNRNPLP14866 589 aaKnown RBP eCLIP13.84□□□□□ -0.19
RPL28-202ENST00000426763 TMEM26Q6ZUK4 368 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 ZMAT2Q96NC0 199 aaKnown RBP13.84□□□□□ -0.19
RPL28-202ENST00000426763 CDRT15Q96T59 188 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 IL1RAPL1Q9NZN1 696 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 HS3ST4Q9Y661 456 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 MYH1P12882 1939 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 PIPSLA2A3N6 862 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 CHRNA1P02708 482 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 CRHR1P34998 444 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 KCNQ1P51787 676 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 PRKAG1P54619 331 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 USP4Q13107 963 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 ZBTB49Q6ZSB9 765 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 IFNLR1Q8IU57 520 aaPredicted RBP13.84□□□□□ -0.19
RPL28-202ENST00000426763 FKBPLQ9UIM3 349 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 GGA2Q9UJY4 613 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 MYH3P11055 1940 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 IRS2Q9Y4H2 1338 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 RASSF10A6NK89 507 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 OR2AG2A6NM03 316 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 SLC7A4O43246 635 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 PFDN1O60925 122 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 SNRPB2P08579 225 aaKnown RBP13.84□□□□□ -0.19
RPL28-202ENST00000426763 MAPKAPK3Q16644 382 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 TAF8Q7Z7C8 310 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 PCDH12Q9NPG4 1184 aa13.84□□□□□ -0.19
RPL28-202ENST00000426763 UQCRBP14927 111 aa13.83□□□□□ -0.19
RPL28-202ENST00000426763 CRATP43155 626 aa13.83□□□□□ -0.19
RPL28-202ENST00000426763 LIMK2P53671 638 aa13.83□□□□□ -0.19
RPL28-202ENST00000426763 MLLT6P55198 1093 aaPredicted RBP13.83□□□□□ -0.19
RPL28-202ENST00000426763 ESRP1Q6NXG1 681 aaKnown RBP13.83□□□□□ -0.19
RPL28-202ENST00000426763 CHMP1BQ7LBR1 199 aa13.83□□□□□ -0.19
RPL28-202ENST00000426763 CNBD2Q96M20 576 aa13.83□□□□□ -0.19
RPL28-202ENST00000426763 RBM47A0AV96 593 aaKnown RBP13.83□□□□□ -0.2
RPL28-202ENST00000426763 IMPDH2P12268 514 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 OGNP20774 298 aaKnown RBP13.83□□□□□ -0.2
RPL28-202ENST00000426763 IL1R2P27930 398 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 NMBRP28336 390 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 PTGER3P43115 390 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 MPP1Q00013 466 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 SEMA5AQ13591 1074 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 SF1Q15637 639 aaKnown RBP13.83□□□□□ -0.2
RPL28-202ENST00000426763 LDLRAP1Q5SW96 308 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 SCIMPQ6UWF3 145 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 EID3Q8N140 333 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 CYP4Z2PQ8N1L4 340 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 TRIT1Q9H3H1 467 aaKnown RBP13.83□□□□□ -0.2
RPL28-202ENST00000426763 SUV39H2Q9H5I1 410 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 IL36AQ9UHA7 158 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 ZNF180Q9UJW8 692 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 MRPS33Q9Y291 106 aaKnown RBP13.83□□□□□ -0.2
RPL28-202ENST00000426763 TM7SF2O76062 418 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 CCDC85BQ15834 202 aaPredicted RBP13.83□□□□□ -0.2
RPL28-202ENST00000426763 TCHHL1Q5QJ38 904 aaPredicted RBP13.83□□□□□ -0.2
RPL28-202ENST00000426763 NCBP2-AS2Q69YL0 99 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 CFAP206Q8IYR0 622 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 KLHL23Q8NBE8 558 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 TSTD1Q8NFU3 115 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 BTN2A2Q8WVV5 523 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 NELL1Q92832 810 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 SHDQ96IW2 340 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 NUDT4Q9NZJ9 180 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 CORO2BQ9UQ03 480 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 KLHL20Q9Y2M5 609 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 VIRMAQ69YN4 1812 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms