RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 TBC1D1Q86TI0 1168 aaPredicted RBP15.16■□□□□ 0.02
ACTB-204ENST00000425660 NXNL1Q96CM4 212 aa15.16■□□□□ 0.02
ACTB-204ENST00000425660 HEPHQ9BQS7 1158 aa15.16■□□□□ 0.02
ACTB-204ENST00000425660 AARSD1Q9BTE6 412 aaKnown RBP15.16■□□□□ 0.02
ACTB-204ENST00000425660 GPAMQ9HCL2 828 aa15.16■□□□□ 0.02
ACTB-204ENST00000425660 IGSF5Q9NSI5 407 aa15.16■□□□□ 0.02
ACTB-204ENST00000425660 THAP1Q9NVV9 213 aa15.16■□□□□ 0.02
ACTB-204ENST00000425660 RUVBL2Q9Y230 463 aaKnown RBP15.16■□□□□ 0.02
ACTB-204ENST00000425660 TSPAN11A1L157 253 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 PRRT4C9JH25 899 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 TK2O00142 265 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 BNIP3LO60238 219 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 CLDN7O95471 211 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 SERPINE1P05121 402 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 UGT2B4P06133 528 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 CDKN1CP49918 316 aaPredicted RBP15.15■□□□□ 0.02
ACTB-204ENST00000425660 KPNA2P52292 529 aaKnown RBP15.15■□□□□ 0.02
ACTB-204ENST00000425660 PTPN5P54829 565 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 FAM83EQ2M2I3 478 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 LRRC8EQ6NSJ5 796 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 CRTC1Q6UUV9 634 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 CERS6Q6ZMG9 384 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 PHTF2Q8N3S3 785 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 BIRC8Q96P09 236 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 MYADMQ96S97 322 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 OSBPL1AQ9BXW6 950 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 C20orf27Q9GZN8 174 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 MRPL46Q9H2W6 279 aaKnown RBP15.15■□□□□ 0.02
ACTB-204ENST00000425660 ZNF576Q9H609 170 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 OXSMQ9NWU1 459 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 APPL1Q9UKG1 709 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 MED16Q9Y2X0 877 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 SPTBN5Q9NRC6 3674 aaKnown RBP15.15■□□□□ 0.02
ACTB-204ENST00000425660 DNAJC6O75061 913 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 TBX10O75333 385 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 NDUFS3O75489 264 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 SRP72O76094 671 aaKnown RBP15.15■□□□□ 0.02
ACTB-204ENST00000425660 LTA4HP09960 611 aaKnown RBP15.15■□□□□ 0.02
ACTB-204ENST00000425660 TROVE2P10155 538 aaKnown RBP eCLIP15.15■□□□□ 0.02
ACTB-204ENST00000425660 SLC6A11P48066 632 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 STX3Q13277 289 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 AGAP9Q5VTM2 703 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 GRAMD4Q6IC98 578 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 TMEM207Q6UWW9 146 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 ZYG11AQ6WRX3 759 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 PAF1Q8N7H5 531 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 HCAR2Q8TDS4 363 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 HEXDCQ8WVB3 486 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 C10orf82Q8WW14 230 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 CCT6BQ92526 530 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 ELSPBP1Q96BH3 223 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 MRPL57Q9BQC6 102 aaKnown RBP15.15■□□□□ 0.02
ACTB-204ENST00000425660 TRIM55Q9BYV6 548 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 BRD9Q9H8M2 597 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 IL26Q9NPH9 171 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 XPR1Q9UBH6 696 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 COL4A3Q01955 1670 aa15.15■□□□□ 0.02
ACTB-204ENST00000425660 DOCK8Q8NF50 2099 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 TRBV5-4A0A0C4DH59 114 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 AGAP14A8MT82 685 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 LEFTY1O75610 366 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 PRAMEF1O95521 474 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 RALBP11234 206 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 LAMP2P13473 410 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 BPIP17213 487 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 PSMC3P17980 439 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 LHCGRP22888 699 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 PTGER3P43115 390 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 DLX2Q07687 328 aaPredicted RBP15.14■□□□□ 0.01
ACTB-204ENST00000425660 SF3A3Q12874 501 aaKnown RBP eCLIP15.14■□□□□ 0.015e-7■■■■□ 22.6
ACTB-204ENST00000425660 RUNX3Q13761 415 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 ACAP2Q15057 778 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 ZRANB3Q5FWF4 1079 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 ZCCHC23Q6ZST2 131 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 TSPAN33Q86UF1 283 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 STK40Q8N2I9 435 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 CPA6Q8N4T0 437 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 ANKRD49Q8WVL7 239 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 NXPE3Q969Y0 559 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 KLHL32Q96NJ5 620 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 CPSF2Q9P2I0 782 aaKnown RBP15.14■□□□□ 0.01
ACTB-204ENST00000425660 DKK3Q9UBP4 350 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 PLA2G4CQ9UP65 541 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 COMMD10Q9Y6G5 202 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 SLC30A1Q9Y6M5 507 aa15.14■□□□□ 0.01
ACTB-204ENST00000425660 CCT8L1PA6NM43 557 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.13■□□□□ 0.01
ACTB-204ENST00000425660 TRIM13O60858 407 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 H2AFYO75367 372 aaKnown RBP15.13■□□□□ 0.01
ACTB-204ENST00000425660 CTSLP07711 333 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 CCDC166P0CW27 439 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 MYL2P10916 166 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 ZNF37AP17032 561 aaPredicted RBP15.13■□□□□ 0.01
ACTB-204ENST00000425660 EIF2DP41214 584 aaKnown RBP15.13■□□□□ 0.01
ACTB-204ENST00000425660 GLRBP48167 497 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 PRKAA2P54646 552 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 ST8SIA6P61647 398 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 PTSQ03393 145 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 OVGP1Q12889 678 aa15.13■□□□□ 0.01
ACTB-204ENST00000425660 NFATC2Q13469 925 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms