RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 B4GALNT4Q76KP1 1039 aa18.4■□□□□ 0.54
NUP50-207ENST00000424634 NLRP8Q86W28 1048 aa18.4■□□□□ 0.54
NUP50-207ENST00000424634 VSIG1Q86XK7 387 aa18.4■□□□□ 0.54
NUP50-207ENST00000424634 CNGA4Q8IV77 575 aa18.4■□□□□ 0.54
NUP50-207ENST00000424634 Q8N9G6 341 aaPredicted RBP18.4■□□□□ 0.54
NUP50-207ENST00000424634 OR6C4Q8NGE1 309 aa18.4■□□□□ 0.54
NUP50-207ENST00000424634 RNF25Q96BH1 459 aaPredicted RBP18.4■□□□□ 0.54
NUP50-207ENST00000424634 AP2M1Q96CW1 435 aa18.4■□□□□ 0.54
NUP50-207ENST00000424634 TMEM98Q9Y2Y6 226 aa18.4■□□□□ 0.54
NUP50-207ENST00000424634 PLEKHM1Q9Y4G2 1056 aa18.4■□□□□ 0.54
NUP50-207ENST00000424634 PCDHGA8Q9Y5G5 932 aa18.4■□□□□ 0.54
NUP50-207ENST00000424634 CAPN8A6NHC0 703 aa18.39■□□□□ 0.53
NUP50-207ENST00000424634 KRT10P13645 584 aa18.39■□□□□ 0.53
NUP50-207ENST00000424634 ZNF30P17039 623 aa18.39■□□□□ 0.53
NUP50-207ENST00000424634 PCBP4P57723 403 aaKnown RBP18.39■□□□□ 0.53
NUP50-207ENST00000424634 IFI35P80217 286 aaPredicted RBP18.39■□□□□ 0.53
NUP50-207ENST00000424634 QPCTQ16769 361 aa18.39■□□□□ 0.53
NUP50-207ENST00000424634 LRRC38Q5VT99 294 aa18.39■□□□□ 0.53
NUP50-207ENST00000424634 TRIM74Q86UV6 250 aa18.39■□□□□ 0.53
NUP50-207ENST00000424634 C17orf82Q86X59 251 aaPredicted RBP18.39■□□□□ 0.53
NUP50-207ENST00000424634 TC2NQ8N9U0 490 aa18.39■□□□□ 0.53
NUP50-207ENST00000424634 ZNF248Q8NDW4 579 aa18.39■□□□□ 0.53
NUP50-207ENST00000424634 LPCAT1Q8NF37 534 aa18.39■□□□□ 0.53
NUP50-207ENST00000424634 SCARF2Q96GP6 870 aaPredicted RBP18.39■□□□□ 0.53
NUP50-207ENST00000424634 GFM1Q96RP9 751 aaKnown RBP18.39■□□□□ 0.53
NUP50-207ENST00000424634 WDR24Q96S15 920 aa18.39■□□□□ 0.53
NUP50-207ENST00000424634 LYSMD1Q96S90 227 aa18.39■□□□□ 0.53
NUP50-207ENST00000424634 RIOK2Q9BVS4 552 aaKnown RBP18.39■□□□□ 0.53
NUP50-207ENST00000424634 CEP41Q9BYV8 373 aa18.39■□□□□ 0.53
NUP50-207ENST00000424634 FOXP3Q9BZS1 431 aa18.39■□□□□ 0.53
NUP50-207ENST00000424634 TRNAU1APQ9NX07 287 aaKnown RBP18.39■□□□□ 0.53
NUP50-207ENST00000424634 TAAR2Q9P1P5 351 aa18.39■□□□□ 0.53
NUP50-207ENST00000424634 LRIT1Q9P2V4 623 aa18.39■□□□□ 0.53
NUP50-207ENST00000424634 INTUQ9ULD6 942 aa18.39■□□□□ 0.53
NUP50-207ENST00000424634 ATXN7L1Q9ULK2 861 aaPredicted RBP18.39■□□□□ 0.53
NUP50-207ENST00000424634 ZFC3H1O60293 1989 aaKnown RBP18.39■□□□□ 0.53
NUP50-207ENST00000424634 D6RAR5 112 aa18.38■□□□□ 0.53
NUP50-207ENST00000424634 APOL1O14791 398 aa18.38■□□□□ 0.53
NUP50-207ENST00000424634 KRT1P04264 644 aa18.38■□□□□ 0.53
NUP50-207ENST00000424634 IVLP07476 585 aa18.38■□□□□ 0.53
NUP50-207ENST00000424634 TNNT1P13805 278 aa18.38■□□□□ 0.53
NUP50-207ENST00000424634 PNLIPP16233 465 aa18.38■□□□□ 0.53
NUP50-207ENST00000424634 COMTP21964 271 aa18.38■□□□□ 0.53
NUP50-207ENST00000424634 ADCY8P40145 1251 aa18.38■□□□□ 0.53
NUP50-207ENST00000424634 MAZP56270 477 aaKnown RBP18.38■□□□□ 0.53
NUP50-207ENST00000424634 RPL26P61254 145 aaKnown RBP18.38■□□□□ 0.53
NUP50-207ENST00000424634 CTBSQ01459 385 aa18.38■□□□□ 0.53
NUP50-207ENST00000424634 AP1B1Q10567 949 aa18.38■□□□□ 0.53
NUP50-207ENST00000424634 FOXR1Q6PIV2 292 aa18.38■□□□□ 0.53
NUP50-207ENST00000424634 DOK6Q6PKX4 331 aa18.38■□□□□ 0.53
NUP50-207ENST00000424634 SARM1Q6SZW1 724 aa18.38■□□□□ 0.53
NUP50-207ENST00000424634 MFSD7Q6UXD7 560 aa18.38■□□□□ 0.53
NUP50-207ENST00000424634 ZNF765Q7L2R6 523 aa18.38■□□□□ 0.53
NUP50-207ENST00000424634 CCNJLQ8IV13 435 aa18.38■□□□□ 0.53
NUP50-207ENST00000424634 NRSN1Q8IZ57 195 aa18.38■□□□□ 0.53
NUP50-207ENST00000424634 WDR36Q8NI36 951 aaKnown RBP18.38■□□□□ 0.53
NUP50-207ENST00000424634 COX14Q96I36 57 aa18.38■□□□□ 0.53
NUP50-207ENST00000424634 ZNF830Q96NB3 372 aaPredicted RBP18.38■□□□□ 0.53
NUP50-207ENST00000424634 OLFM3Q96PB7 478 aa18.38■□□□□ 0.53
NUP50-207ENST00000424634 MAK16Q9BXY0 300 aaKnown RBP18.38■□□□□ 0.53
NUP50-207ENST00000424634 GSDMCQ9BYG8 508 aa18.38■□□□□ 0.53
NUP50-207ENST00000424634 THSD1Q9NS62 852 aa18.38■□□□□ 0.53
NUP50-207ENST00000424634 HAUS2Q9NVX0 235 aa18.38■□□□□ 0.53
NUP50-207ENST00000424634 CNOT6Q9ULM6 557 aaKnown RBP18.38■□□□□ 0.53
NUP50-207ENST00000424634 RPL26L1Q9UNX3 145 aaKnown RBP18.38■□□□□ 0.53
NUP50-207ENST00000424634 SCN8AQ9UQD0 1980 aa18.37■□□□□ 0.53
NUP50-207ENST00000424634 CCDC187A0A096LP49 1063 aa18.37■□□□□ 0.53
NUP50-207ENST00000424634 CDRT15L2A8MXV6 281 aa18.37■□□□□ 0.53
NUP50-207ENST00000424634 ANKRD66B4E2M5 251 aa18.37■□□□□ 0.53
NUP50-207ENST00000424634 B4GAT1O43505 415 aa18.37■□□□□ 0.53
NUP50-207ENST00000424634 NUDT21O43809 227 aaKnown RBP18.37■□□□□ 0.53
NUP50-207ENST00000424634 TNFSF15O95150 251 aa18.37■□□□□ 0.53
NUP50-207ENST00000424634 CA4P22748 312 aa18.37■□□□□ 0.53
NUP50-207ENST00000424634 RBMS1P29558 406 aaKnown RBP18.37■□□□□ 0.53
NUP50-207ENST00000424634 SLC1A1P43005 524 aa18.37■□□□□ 0.53
NUP50-207ENST00000424634 B4GALNT1Q00973 533 aa18.37■□□□□ 0.53
NUP50-207ENST00000424634 ILF3Q12906 894 aaKnown RBP eCLIP18.37■□□□□ 0.53
NUP50-207ENST00000424634 SLC30A9Q6PML9 568 aa18.37■□□□□ 0.53
NUP50-207ENST00000424634 TMPRSS9Q7Z410 1059 aa18.37■□□□□ 0.53
NUP50-207ENST00000424634 SPRED1Q7Z699 444 aa18.37■□□□□ 0.53
NUP50-207ENST00000424634 RFX6Q8HWS3 928 aa18.37■□□□□ 0.53
NUP50-207ENST00000424634 RHOT1Q8IXI2 618 aa18.37■□□□□ 0.53
NUP50-207ENST00000424634 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.37■□□□□ 0.53
NUP50-207ENST00000424634 ZDHHC1Q8WTX9 485 aa18.37■□□□□ 0.53
NUP50-207ENST00000424634 PATE1Q8WXA2 126 aa18.37■□□□□ 0.53
NUP50-207ENST00000424634 EID2BQ96D98 161 aa18.37■□□□□ 0.53
NUP50-207ENST00000424634 LIN37Q96GY3 246 aaPredicted RBP18.37■□□□□ 0.53
NUP50-207ENST00000424634 TRIB3Q96RU7 358 aa18.37■□□□□ 0.53
NUP50-207ENST00000424634 MLPHQ9BV36 600 aaPredicted RBP18.37■□□□□ 0.53
NUP50-207ENST00000424634 TFR2Q9UP52 801 aa18.37■□□□□ 0.53
NUP50-207ENST00000424634 PCYT1BQ9Y5K3 369 aaPredicted RBP18.37■□□□□ 0.53
NUP50-207ENST00000424634 FASNP49327 2511 aaKnown RBP18.37■□□□□ 0.53
NUP50-207ENST00000424634 INPP4BO15327 924 aa18.36■□□□□ 0.53
NUP50-207ENST00000424634 ECEL1O95672 775 aa18.36■□□□□ 0.53
NUP50-207ENST00000424634 MAGEA1P43355 309 aa18.36■□□□□ 0.53
NUP50-207ENST00000424634 SPINT3P49223 89 aa18.36■□□□□ 0.53
NUP50-207ENST00000424634 INHBCP55103 352 aa18.36■□□□□ 0.53
NUP50-207ENST00000424634 DYNLT1P63172 113 aa18.36■□□□□ 0.53
NUP50-207ENST00000424634 ZFP36L1Q07352 338 aaKnown RBP18.36■□□□□ 0.53
NUP50-207ENST00000424634 ATMQ13315 3056 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms