RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 ALG14Q96F25 216 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 CDKN2AIPNLQ96HQ2 116 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 GPR78Q96P69 363 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 UNKQ9C0B0 810 aaKnown RBP16.53■□□□□ 0.24
CMTM3-202ENST00000424011 COG4Q9H9E3 785 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 GPAMQ9HCL2 828 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 INTS10Q9NVR2 710 aaKnown RBP16.53■□□□□ 0.24
CMTM3-202ENST00000424011 KIAA1522Q9P206 1035 aaPredicted RBP16.53■□□□□ 0.24
CMTM3-202ENST00000424011 XPR1Q9UBH6 696 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 LHX3Q9UBR4 397 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 PLXNA4Q9HCM2 1894 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 ANAPC1Q9H1A4 1944 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 ANKRD66B4E2M5 251 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 TARM1B6A8C7 271 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 SCAMP3O14828 347 aaKnown RBP16.53■□□□□ 0.24
CMTM3-202ENST00000424011 PFDN1O60925 122 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 PRLP01236 227 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 LYNP07948 512 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 RBP1P09455 135 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 LTA4HP09960 611 aaKnown RBP16.53■□□□□ 0.24
CMTM3-202ENST00000424011 PIRTP0C851 137 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 PSMA3P25788 255 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 PGM1P36871 562 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 CCR10P46092 362 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 ZNF140P52738 457 aaPredicted RBP16.53■□□□□ 0.24
CMTM3-202ENST00000424011 ERVFC1P60507 584 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 AP1S1P61966 158 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 RCN1Q15293 331 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 LIN52Q52LA3 116 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 ZNF789Q5FWF6 425 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 RNF135Q8IUD6 432 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 PNPLA1Q8N8W4 532 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 PPFIBP2Q8ND30 876 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 OR13C4Q8NGS5 318 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 AGR3Q8TD06 166 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 CENPKQ9BS16 269 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 MARCH4Q9P2E8 410 aaPredicted RBP16.53■□□□□ 0.24
CMTM3-202ENST00000424011 DNMT3BQ9UBC3 853 aaKnown RBP16.53■□□□□ 0.24
CMTM3-202ENST00000424011 ARHGAP26Q9UNA1 814 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 PCDHGC4Q9Y5F7 938 aa16.53■□□□□ 0.24
CMTM3-202ENST00000424011 CXorf51AA0A1B0GTR3 108 aa16.52■□□□□ 0.24
CMTM3-202ENST00000424011 CCL22O00626 93 aa16.52■□□□□ 0.24
CMTM3-202ENST00000424011 PFDN6O15212 129 aa16.52■□□□□ 0.24
CMTM3-202ENST00000424011 CHRNGP07510 517 aa16.52■□□□□ 0.24
CMTM3-202ENST00000424011 LPOP22079 712 aaPredicted RBP16.52■□□□□ 0.24
CMTM3-202ENST00000424011 MAPK8P45983 427 aa16.52■□□□□ 0.24
CMTM3-202ENST00000424011 UBE3AQ05086 875 aa16.52■□□□□ 0.24
CMTM3-202ENST00000424011 SLC34A1Q06495 639 aa16.52■□□□□ 0.24
CMTM3-202ENST00000424011 BBS7Q8IWZ6 715 aa16.52■□□□□ 0.24
CMTM3-202ENST00000424011 MAPK15Q8TD08 544 aa16.52■□□□□ 0.24
CMTM3-202ENST00000424011 WDR60Q8WVS4 1066 aa16.52■□□□□ 0.24
CMTM3-202ENST00000424011 HIC2Q96JB3 615 aa16.52■□□□□ 0.24
CMTM3-202ENST00000424011 TCF12Q99081 682 aa16.52■□□□□ 0.24
CMTM3-202ENST00000424011 OLFM1Q99784 485 aa16.52■□□□□ 0.24
CMTM3-202ENST00000424011 DRC3Q9H069 523 aa16.52■□□□□ 0.24
CMTM3-202ENST00000424011 ILKAPQ9H0C8 392 aaPredicted RBP16.52■□□□□ 0.24
CMTM3-202ENST00000424011 PLA2G4CQ9UP65 541 aa16.52■□□□□ 0.24
CMTM3-202ENST00000424011 VPS9D1Q9Y2B5 631 aa16.52■□□□□ 0.24
CMTM3-202ENST00000424011 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.52■□□□□ 0.24
CMTM3-202ENST00000424011 LINC01553A4QN01 128 aa16.52■□□□□ 0.23
CMTM3-202ENST00000424011 OR51F1A6NGY5 319 aa16.52■□□□□ 0.23
CMTM3-202ENST00000424011 LEFTY2O00292 366 aa16.52■□□□□ 0.23
CMTM3-202ENST00000424011 CCL16O15467 120 aa16.52■□□□□ 0.23
CMTM3-202ENST00000424011 GRIA4P48058 902 aa16.52■□□□□ 0.23
CMTM3-202ENST00000424011 ACAP2Q15057 778 aa16.52■□□□□ 0.23
CMTM3-202ENST00000424011 TYSND1Q2T9J0 566 aa16.52■□□□□ 0.23
CMTM3-202ENST00000424011 SLC9B1Q4ZJI4 515 aa16.52■□□□□ 0.23
CMTM3-202ENST00000424011 CFAP157Q5JU67 520 aa16.52■□□□□ 0.23
CMTM3-202ENST00000424011 PLPP4Q5VZY2 271 aa16.52■□□□□ 0.23
CMTM3-202ENST00000424011 EPGNQ6UW88 154 aa16.52■□□□□ 0.23
CMTM3-202ENST00000424011 FIBINQ8TAL6 211 aa16.52■□□□□ 0.23
CMTM3-202ENST00000424011 HEXDCQ8WVB3 486 aa16.52■□□□□ 0.23
CMTM3-202ENST00000424011 NSMCE3Q96MG7 304 aa16.52■□□□□ 0.23
CMTM3-202ENST00000424011 SLC46A2Q9BY10 475 aa16.52■□□□□ 0.23
CMTM3-202ENST00000424011 POPDC3Q9HBV1 291 aa16.52■□□□□ 0.23
CMTM3-202ENST00000424011 MAN1C1Q9NR34 630 aa16.52■□□□□ 0.23
CMTM3-202ENST00000424011 TLR9Q9NR96 1032 aa16.52■□□□□ 0.23
CMTM3-202ENST00000424011 SPO11Q9Y5K1 396 aa16.52■□□□□ 0.23
CMTM3-202ENST00000424011 BUD23O43709 281 aaKnown RBP16.51■□□□□ 0.23
CMTM3-202ENST00000424011 MPSTP25325 297 aa16.51■□□□□ 0.23
CMTM3-202ENST00000424011 SERPINB5P36952 375 aa16.51■□□□□ 0.23
CMTM3-202ENST00000424011 CLCN4P51793 760 aa16.51■□□□□ 0.23
CMTM3-202ENST00000424011 STC1P52823 247 aa16.51■□□□□ 0.23
CMTM3-202ENST00000424011 ARHGAP15Q53QZ3 475 aa16.51■□□□□ 0.23
CMTM3-202ENST00000424011 ACSBG2Q5FVE4 666 aa16.51■□□□□ 0.23
CMTM3-202ENST00000424011 OR4K2Q8NGD2 314 aa16.51■□□□□ 0.23
CMTM3-202ENST00000424011 PDCD6IPQ8WUM4 868 aaKnown RBP16.51■□□□□ 0.23
CMTM3-202ENST00000424011 UBXN10Q96LJ8 280 aa16.51■□□□□ 0.23
CMTM3-202ENST00000424011 ZNF184Q99676 751 aaPredicted RBP16.51■□□□□ 0.23
CMTM3-202ENST00000424011 IGSF5Q9NSI5 407 aa16.51■□□□□ 0.23
CMTM3-202ENST00000424011 RHBDL2Q9NX52 303 aa16.51■□□□□ 0.23
CMTM3-202ENST00000424011 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.51■□□□□ 0.23
CMTM3-202ENST00000424011 SOBPA7XYQ1 873 aa16.51■□□□□ 0.23
CMTM3-202ENST00000424011 MEI4A8MW99 385 aa16.51■□□□□ 0.23
CMTM3-202ENST00000424011 MAP3K7O43318 606 aa16.51■□□□□ 0.23
CMTM3-202ENST00000424011 HNRNPRO43390 633 aaKnown RBP16.51■□□□□ 0.23
CMTM3-202ENST00000424011 DLX3O60479 287 aa16.51■□□□□ 0.23
CMTM3-202ENST00000424011 MAGEC1O60732 1142 aa16.51■□□□□ 0.23
CMTM3-202ENST00000424011 UBTFL6P0CB48 400 aaPredicted RBP16.51■□□□□ 0.23
CMTM3-202ENST00000424011 ATP5F1P24539 256 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms