RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 ITGB2P05107 769 aa16.1■□□□□ 0.17
COL18A1-205ENST00000423214 FGF1P05230 155 aa16.1■□□□□ 0.17
COL18A1-205ENST00000423214 IVLP07476 585 aa16.1■□□□□ 0.17
COL18A1-205ENST00000423214 ACTR1BP42025 376 aa16.1■□□□□ 0.17
COL18A1-205ENST00000423214 SSR1P43307 286 aaKnown RBP16.1■□□□□ 0.17
COL18A1-205ENST00000423214 GPR3P46089 330 aa16.1■□□□□ 0.17
COL18A1-205ENST00000423214 ACTR1AP61163 376 aa16.1■□□□□ 0.17
COL18A1-205ENST00000423214 CTBSQ01459 385 aa16.1■□□□□ 0.17
COL18A1-205ENST00000423214 NFATC3Q12968 1075 aa16.1■□□□□ 0.17
COL18A1-205ENST00000423214 NR1D2Q14995 579 aa16.1■□□□□ 0.17
COL18A1-205ENST00000423214 RCBTB1Q8NDN9 531 aa16.1■□□□□ 0.17
COL18A1-205ENST00000423214 CCDC112Q8NEF3 446 aa16.1■□□□□ 0.17
COL18A1-205ENST00000423214 PATE1Q8WXA2 126 aa16.1■□□□□ 0.17
COL18A1-205ENST00000423214 EXTL1Q92935 676 aa16.1■□□□□ 0.17
COL18A1-205ENST00000423214 CCDC74BQ96LY2 380 aa16.1■□□□□ 0.17
COL18A1-205ENST00000423214 POLR1EQ9GZS1 481 aaKnown RBP16.1■□□□□ 0.17
COL18A1-205ENST00000423214 CD84Q9UIB8 345 aa16.1■□□□□ 0.17
COL18A1-205ENST00000423214 SLC17A4Q9Y2C5 497 aa16.1■□□□□ 0.17
COL18A1-205ENST00000423214 TTLL3Q9Y4R7 772 aa16.1■□□□□ 0.17
COL18A1-205ENST00000423214 PCDHGA4Q9Y5G9 962 aa16.1■□□□□ 0.17
COL18A1-205ENST00000423214 STMND1H3BQB6 276 aa16.09■□□□□ 0.17
COL18A1-205ENST00000423214 B4GAT1O43505 415 aa16.09■□□□□ 0.17
COL18A1-205ENST00000423214 ZNF30P17039 623 aa16.09■□□□□ 0.17
COL18A1-205ENST00000423214 CA4P22748 312 aa16.09■□□□□ 0.17
COL18A1-205ENST00000423214 GJC1P36383 396 aa16.09■□□□□ 0.17
COL18A1-205ENST00000423214 ADCY8P40145 1251 aa16.09■□□□□ 0.17
COL18A1-205ENST00000423214 POLD2P49005 469 aa16.09■□□□□ 0.17
COL18A1-205ENST00000423214 ATP1A2P50993 1020 aa16.09■□□□□ 0.17
COL18A1-205ENST00000423214 FANCCQ00597 558 aa16.09■□□□□ 0.17
COL18A1-205ENST00000423214 DPTQ07507 201 aa16.09■□□□□ 0.17
COL18A1-205ENST00000423214 LRRC66Q68CR7 880 aa16.09■□□□□ 0.17
COL18A1-205ENST00000423214 TXNRD3NBQ6F5E7 133 aa16.09■□□□□ 0.17
COL18A1-205ENST00000423214 C17orf82Q86X59 251 aaPredicted RBP16.09■□□□□ 0.17
COL18A1-205ENST00000423214 NIPA2Q8N8Q9 360 aa16.09■□□□□ 0.17
COL18A1-205ENST00000423214 AP2M1Q96CW1 435 aa16.09■□□□□ 0.17
COL18A1-205ENST00000423214 SEMA3CQ99985 751 aa16.09■□□□□ 0.17
COL18A1-205ENST00000423214 THAP2Q9H0W7 228 aa16.09■□□□□ 0.17
COL18A1-205ENST00000423214 RCOR3Q9P2K3 495 aaPredicted RBP16.09■□□□□ 0.17
COL18A1-205ENST00000423214 IP6K2Q9UHH9 426 aa16.09■□□□□ 0.17
COL18A1-205ENST00000423214 DNPEPQ9ULA0 475 aa16.09■□□□□ 0.17
COL18A1-205ENST00000423214 IGHV5-10-1A0A0J9YXX1 117 aa16.08■□□□□ 0.16
COL18A1-205ENST00000423214 PYCARD-AS1I3L0S3 204 aa16.08■□□□□ 0.16
COL18A1-205ENST00000423214 MFSD11O43934 449 aa16.08■□□□□ 0.16
COL18A1-205ENST00000423214 FUCA1P04066 466 aa16.08■□□□□ 0.16
COL18A1-205ENST00000423214 PYGLP06737 847 aa16.08■□□□□ 0.16
COL18A1-205ENST00000423214 TPM4P67936 248 aa16.08■□□□□ 0.16
COL18A1-205ENST00000423214 SLC25A11Q02978 314 aaKnown RBP16.08■□□□□ 0.16
COL18A1-205ENST00000423214 TRA2AQ13595 282 aaKnown RBP eCLIP16.08■□□□□ 0.16
COL18A1-205ENST00000423214 PTPRRQ15256 657 aa16.08■□□□□ 0.16
COL18A1-205ENST00000423214 HADHQ16836 314 aaKnown RBP16.08■□□□□ 0.16
COL18A1-205ENST00000423214 CCDC122Q5T0U0 273 aa16.08■□□□□ 0.16
COL18A1-205ENST00000423214 TIGD7Q6NT04 549 aaPredicted RBP16.08■□□□□ 0.16
COL18A1-205ENST00000423214 XKR5Q6UX68 686 aa16.08■□□□□ 0.16
COL18A1-205ENST00000423214 ADAMTSL4Q6UY14 1074 aa16.08■□□□□ 0.16
COL18A1-205ENST00000423214 MARK2Q7KZI7 788 aaKnown RBP16.08■□□□□ 0.16
COL18A1-205ENST00000423214 TRIM74Q86UV6 250 aa16.08■□□□□ 0.16
COL18A1-205ENST00000423214 GALNT13Q8IUC8 556 aa16.08■□□□□ 0.16
COL18A1-205ENST00000423214 LRRC49Q8IUZ0 686 aa16.08■□□□□ 0.16
COL18A1-205ENST00000423214 NAGSQ8N159 534 aa16.08■□□□□ 0.16
COL18A1-205ENST00000423214 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.08■□□□□ 0.16
COL18A1-205ENST00000423214 PTCD2Q8WV60 388 aaKnown RBP16.08■□□□□ 0.16
COL18A1-205ENST00000423214 BTBD6Q96KE9 485 aa16.08■□□□□ 0.16
COL18A1-205ENST00000423214 DPYSL5Q9BPU6 564 aa16.08■□□□□ 0.16
COL18A1-205ENST00000423214 NUP85Q9BW27 656 aa16.08■□□□□ 0.16
COL18A1-205ENST00000423214 B3GNT4Q9C0J1 378 aa16.08■□□□□ 0.16
COL18A1-205ENST00000423214 ABCG8Q9H221 673 aa16.08■□□□□ 0.16
COL18A1-205ENST00000423214 KCNK4Q9NYG8 393 aa16.08■□□□□ 0.16
COL18A1-205ENST00000423214 A0A0U1RQS6 177 aa16.07■□□□□ 0.16
COL18A1-205ENST00000423214 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.07■□□□□ 0.16
COL18A1-205ENST00000423214 GOLGA6L19H0YKK7 550 aa16.07■□□□□ 0.16
COL18A1-205ENST00000423214 SOD1P00441 154 aa16.07■□□□□ 0.16
COL18A1-205ENST00000423214 PDHA1P08559 390 aa16.07■□□□□ 0.16
COL18A1-205ENST00000423214 CCL4P13236 92 aa16.07■□□□□ 0.16
COL18A1-205ENST00000423214 CD1CP29017 333 aa16.07■□□□□ 0.16
COL18A1-205ENST00000423214 CSTF2P33240 577 aaKnown RBP eCLIP16.07■□□□□ 0.16
COL18A1-205ENST00000423214 LIMK2P53671 638 aa16.07■□□□□ 0.16
COL18A1-205ENST00000423214 UBASH3AP57075 661 aa16.07■□□□□ 0.16
COL18A1-205ENST00000423214 LINC00303Q3SY05 128 aa16.07■□□□□ 0.16
COL18A1-205ENST00000423214 FIGNQ5HY92 759 aa16.07■□□□□ 0.16
COL18A1-205ENST00000423214 ZNF765Q7L2R6 523 aa16.07■□□□□ 0.16
COL18A1-205ENST00000423214 TECPR1Q7Z6L1 1165 aa16.07■□□□□ 0.16
COL18A1-205ENST00000423214 DTX1Q86Y01 620 aa16.07■□□□□ 0.16
COL18A1-205ENST00000423214 EXD3Q8N9H8 876 aa16.07■□□□□ 0.16
COL18A1-205ENST00000423214 AGBL5Q8NDL9 886 aa16.07■□□□□ 0.16
COL18A1-205ENST00000423214 OR4D9Q8NGE8 314 aa16.07■□□□□ 0.16
COL18A1-205ENST00000423214 PIH1D2Q8WWB5 315 aa16.07■□□□□ 0.16
COL18A1-205ENST00000423214 JPH3Q8WXH2 748 aaPredicted RBP16.07■□□□□ 0.16
COL18A1-205ENST00000423214 AHCYL2Q96HN2 611 aaKnown RBP16.07■□□□□ 0.16
COL18A1-205ENST00000423214 TAAR9Q96RI9 348 aa16.07■□□□□ 0.16
COL18A1-205ENST00000423214 STN1Q9H668 368 aaKnown RBP16.07■□□□□ 0.16
COL18A1-205ENST00000423214 CLMPQ9H6B4 373 aa16.07■□□□□ 0.16
COL18A1-205ENST00000423214 TMEM98Q9Y2Y6 226 aa16.07■□□□□ 0.16
COL18A1-205ENST00000423214 PPIL1Q9Y3C6 166 aa16.07■□□□□ 0.16
COL18A1-205ENST00000423214 BZW2Q9Y6E2 419 aaKnown RBP16.07■□□□□ 0.16
COL18A1-205ENST00000423214 IGHV1OR21-1A0A087WYE8 117 aa16.06■□□□□ 0.16
COL18A1-205ENST00000423214 A0A0J9YYE9 177 aa16.06■□□□□ 0.16
COL18A1-205ENST00000423214 INPP4BO15327 924 aa16.06■□□□□ 0.16
COL18A1-205ENST00000423214 ASMTLO95671 621 aa16.06■□□□□ 0.16
COL18A1-205ENST00000423214 TRBC1P01850 177 aa16.06■□□□□ 0.16
COL18A1-205ENST00000423214 FAM87AP0C7U9 286 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms