RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 ASXL3Q9C0F0 2248 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 TSPAN1O60635 241 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 RNASEH1O60930 286 aaKnown RBP10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 STBD1O95210 358 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 SIX3O95343 332 aaPredicted RBP10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 UGT2B4P06133 528 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 CRHR1P34998 444 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 GMPRP36959 345 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 HSPA7P48741 367 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 FKBP1AP62942 108 aaKnown RBP10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 IRF9Q00978 393 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 EPS8Q12929 822 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 TRAF3Q13114 568 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 SGCGQ13326 291 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 PPIL2Q13356 520 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 FAM187BQ17R55 369 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 SOWAHAQ2M3V2 549 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 FNDC3BQ53EP0 1204 aaKnown RBP10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 TMEM214Q6NUQ4 689 aaKnown RBP10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 STRADAQ7RTN6 431 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 SFRP1Q8N474 314 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 CBR4Q8N4T8 237 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 ACTRT2Q8TDY3 377 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 PSMG2Q969U7 264 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 S100A14Q9HCY8 104 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 RAB23Q9ULC3 237 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 EFCAB10A6NFE3 127 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 TMEM233B4DJY2 109 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 M0R2N6 131 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 UBXN8O00124 270 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 FFAR2O15552 330 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 MAP3K13O43283 966 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 RECQL5O94762 991 aaPredicted RBP10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 IPO13O94829 963 aaKnown RBP10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 IFNA14P01570 189 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 PRKCGP05129 697 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 LYNP07948 512 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 TCF3P15923 654 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 PAICSP22234 425 aaKnown RBP10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 SEPHS1P49903 392 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 CCNHP51946 323 aaPredicted RBP10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 PRKAA2P54646 552 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 MAP2K5Q13163 448 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 SQLEQ14534 574 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 DUSP28Q4G0W2 176 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 TAC4Q86UU9 113 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 MON1AQ86VX9 555 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 POC5Q8NA72 575 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 FNIP1Q8TF40 1166 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 TNKS2Q9H2K2 1166 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 EBF2Q9HAK2 575 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 COPG1Q9Y678 874 aaKnown RBP10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 MYH2Q9UKX2 1941 aa10.6□□□□□ -0.71
SEMA4D-208ENST00000422704 COL11A2P13942 1736 aaPredicted RBP10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 BTBD19C9JJ37 291 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 BIRC5O15392 142 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 SLC25A14O95258 325 aaPredicted RBP10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 FTH1P02794 183 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 COL6A1P12109 1028 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 VAV1P15498 845 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 GPD2P43304 727 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 TTPAP49638 278 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 USP39Q53GS9 565 aaKnown RBP10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 SWT1Q5T5J6 900 aaKnown RBP10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 CYP4Z1Q86W10 505 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 WDR60Q8WVS4 1066 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 PROX1Q92786 737 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 DLG3Q92796 817 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 COPS8Q99627 209 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 OR2AG2A6NM03 316 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 SRRM3A6NNA2 597 aaPredicted RBP10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 ITM2AO43736 263 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 SLC22A3O75751 556 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 ANXA6P08133 673 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 GABRR2P28476 465 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 CRYBB1P53674 252 aaPredicted RBP10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 NR1H2P55055 460 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 RAET1GQ6H3X3 334 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 PRMT9Q6P2P2 845 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 SLC26A9Q7LBE3 791 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 PARGQ86W56 976 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 FAM9CQ8IZT9 166 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 DPF3Q92784 378 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 SPACA7Q96KW9 195 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 ANKRD27Q96NW4 1050 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 SDCBP2Q9H190 292 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 KLHL28Q9NXS3 571 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 SPG21Q9NZD8 308 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 EHD3Q9NZN3 535 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 CD84Q9UIB8 345 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 STXBP5LQ9Y2K9 1186 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 IGKV6D-41A0A0C4DH26 115 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 PSMD11O00231 422 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 SEC24AO95486 1093 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 AQP4P55087 323 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 MAD2L1Q13257 205 aaPredicted RBP10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 MED22Q15528 200 aa10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 TSNQ15631 228 aaKnown RBP10.59□□□□□ -0.71
SEMA4D-208ENST00000422704 RFX4Q33E94 735 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms