RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 STN1Q9H668 368 aaKnown RBP13.32□□□□□ -0.28
MCF2L-213ENST00000421756 COQ10BQ9H8M1 238 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 SCUBE2Q9NQ36 999 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 HACD3Q9P035 362 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 VPS28Q9UK41 221 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 A0A087X1B8 175 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 ANGPT2O15123 496 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 STX7O15400 261 aaKnown RBP13.32□□□□□ -0.28
MCF2L-213ENST00000421756 SNRPB2P08579 225 aaKnown RBP13.32□□□□□ -0.28
MCF2L-213ENST00000421756 ALDOCP09972 364 aaKnown RBP13.32□□□□□ -0.28
MCF2L-213ENST00000421756 UGT1A1P22309 533 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 UGT1A4P22310 534 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 UGT1A3P35503 534 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 UGT1A5P35504 534 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 KPNA2P52292 529 aaKnown RBP13.32□□□□□ -0.28
MCF2L-213ENST00000421756 SERINC3Q13530 473 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 SLC44A4Q53GD3 710 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 NAT16Q8N8M0 369 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 TWIST2Q8WVJ9 160 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 CANT1Q8WVQ1 401 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 DPF3Q92784 378 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 LIN28AQ9H9Z2 209 aaKnown RBP13.32□□□□□ -0.28
MCF2L-213ENST00000421756 EPS15L1Q9UBC2 864 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 EIF2B4Q9UI10 523 aaKnown RBP13.32□□□□□ -0.28
MCF2L-213ENST00000421756 SCML2Q9UQR0 700 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 RAD54BQ9Y620 910 aa13.32□□□□□ -0.28
MCF2L-213ENST00000421756 CA12O43570 354 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 CDK14O94921 469 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 CRTAMO95727 393 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 CNPP09543 421 aaKnown RBP13.31□□□□□ -0.28
MCF2L-213ENST00000421756 ATXN1LP0C7T5 689 aaKnown RBP13.31□□□□□ -0.28
MCF2L-213ENST00000421756 MZF1P28698 734 aaPredicted RBP13.31□□□□□ -0.28
MCF2L-213ENST00000421756 PRKAA2P54646 552 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 GNA12Q03113 381 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 TIGD2Q4W5G0 525 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 FAM91A1Q658Y4 838 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 PCSK9Q8NBP7 692 aaKnown RBP13.31□□□□□ -0.28
MCF2L-213ENST00000421756 OR10Q1Q8NGQ4 319 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 CLHC1Q8NHS4 586 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 BCL7CQ8WUZ0 217 aaPredicted RBP13.31□□□□□ -0.28
MCF2L-213ENST00000421756 EEF1AKMT1Q8WVE0 214 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 PRKD2Q9BZL6 878 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 TNKS2Q9H2K2 1166 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 CACNA2D2Q9NY47 1150 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 UBA2Q9UBT2 640 aaPredicted RBP13.31□□□□□ -0.28
MCF2L-213ENST00000421756 ZNHIT2Q9UHR6 403 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 PSMD13Q9UNM6 376 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 RNF103-CHMP3A0A140T963 221 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 INPP4BO15327 924 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 SNX2O60749 519 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 STAMBPO95630 424 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 KLKB1P03952 638 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 MC4RP32245 332 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 CYP2C18P33260 490 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 ATP5C1P36542 298 aaKnown RBP13.31□□□□□ -0.28
MCF2L-213ENST00000421756 CLCN5P51795 746 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 PIGGQ5H8A4 983 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 MSANTD2Q6P1R3 559 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 RETREG3Q86VR2 466 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 HERC6Q8IVU3 1022 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 MDGA1Q8NFP4 955 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 TSPAN17Q96FV3 270 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 SLC22A12Q96S37 553 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 GPR63Q9BZJ6 419 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 RNF38Q9H0F5 515 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 GSTO2Q9H4Y5 243 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 VPS45Q9NRW7 570 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 VTI1BQ9UEU0 232 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 Q9Y3F1 56 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.31□□□□□ -0.28
MCF2L-213ENST00000421756 ALOX15P16050 662 aaPredicted RBP13.31□□□□□ -0.28
MCF2L-213ENST00000421756 ATF6P18850 670 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 WEE1P30291 646 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 ALDH7A1P49419 539 aaKnown RBP13.31□□□□□ -0.28
MCF2L-213ENST00000421756 SP3Q02447 781 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 ZNF177Q13360 481 aaPredicted RBP13.31□□□□□ -0.28
MCF2L-213ENST00000421756 C6orf10Q5SRN2 563 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 MAP3K21Q5TCX8 1036 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 LCA5Q86VQ0 697 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 CAMK1DQ8IU85 385 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 PGAM4Q8N0Y7 254 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 CDC26Q8NHZ8 85 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 SLC29A1Q99808 456 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 CROTQ9UKG9 612 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 AP4S1Q9Y587 144 aa13.31□□□□□ -0.28
MCF2L-213ENST00000421756 HEMK1Q9Y5R4 338 aaPredicted RBP13.31□□□□□ -0.28
MCF2L-213ENST00000421756 DICER1Q9UPY3 1922 aaKnown RBP13.31□□□□□ -0.28
MCF2L-213ENST00000421756 PRUNE2Q8WUY3 3088 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 PRRG1O14668 218 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 NRP2O60462 931 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 KPNA6O60684 536 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 C1RP00736 705 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 HOXC8P31273 242 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 ZNF678Q5SXM1 525 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 METTL21CQ5VZV1 264 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 SMYD5Q6GMV2 418 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 KRT80Q6KB66 452 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 UMODL1-AS1Q8N2C9 162 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 SLC39A13Q96H72 371 aa13.3□□□□□ -0.28
MCF2L-213ENST00000421756 TEX37Q96LM6 180 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms