RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 UAP1L1Q3KQV9 507 aa20.57■□□□□ 0.88
HMGXB4-203ENST00000420166 HENMT1Q5T8I9 393 aaKnown RBP20.57■□□□□ 0.88
HMGXB4-203ENST00000420166 LINC00523Q86TU6 105 aa20.57■□□□□ 0.88
HMGXB4-203ENST00000420166 PARGQ86W56 976 aa20.57■□□□□ 0.88
HMGXB4-203ENST00000420166 GRK7Q8WTQ7 553 aa20.57■□□□□ 0.88
HMGXB4-203ENST00000420166 RIOK2Q9BVS4 552 aaKnown RBP20.57■□□□□ 0.88
HMGXB4-203ENST00000420166 CDH19Q9H159 772 aa20.57■□□□□ 0.88
HMGXB4-203ENST00000420166 FAM83DQ9H4H8 585 aa20.57■□□□□ 0.88
HMGXB4-203ENST00000420166 WDR26Q9H7D7 661 aa20.57■□□□□ 0.88
HMGXB4-203ENST00000420166 RAD18Q9NS91 495 aa20.57■□□□□ 0.88
HMGXB4-203ENST00000420166 TM7SF3Q9NS93 570 aa20.57■□□□□ 0.88
HMGXB4-203ENST00000420166 NFKBIL1Q9UBC1 381 aaPredicted RBP20.57■□□□□ 0.88
HMGXB4-203ENST00000420166 NEU2Q9Y3R4 380 aa20.57■□□□□ 0.88
HMGXB4-203ENST00000420166 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.56■□□□□ 0.88
HMGXB4-203ENST00000420166 SLC30A4O14863 429 aa20.56■□□□□ 0.88
HMGXB4-203ENST00000420166 YKT6O15498 198 aa20.56■□□□□ 0.88
HMGXB4-203ENST00000420166 GAS8O95995 478 aa20.56■□□□□ 0.88
HMGXB4-203ENST00000420166 APRTP07741 180 aa20.56■□□□□ 0.88
HMGXB4-203ENST00000420166 HOXC4P09017 264 aaPredicted RBP20.56■□□□□ 0.88
HMGXB4-203ENST00000420166 GPR1P46091 355 aa20.56■□□□□ 0.88
HMGXB4-203ENST00000420166 BASP1P80723 227 aaKnown RBP20.56■□□□□ 0.88
HMGXB4-203ENST00000420166 SHBQ15464 509 aa20.56■□□□□ 0.88
HMGXB4-203ENST00000420166 HEATR4Q86WZ0 1026 aa20.56■□□□□ 0.88
HMGXB4-203ENST00000420166 GPR26Q8NDV2 337 aa20.56■□□□□ 0.88
HMGXB4-203ENST00000420166 FUBP1Q96AE4 644 aaKnown RBP20.56■□□□□ 0.88
HMGXB4-203ENST00000420166 TEX101Q9BY14 249 aa20.56■□□□□ 0.88
HMGXB4-203ENST00000420166 DDX47Q9H0S4 455 aaKnown RBP20.56■□□□□ 0.88
HMGXB4-203ENST00000420166 EIF2B3Q9NR50 452 aaKnown RBP20.56■□□□□ 0.88
HMGXB4-203ENST00000420166 PHPT1Q9NRX4 125 aaPredicted RBP20.56■□□□□ 0.88
HMGXB4-203ENST00000420166 IL17CQ9P0M4 197 aa20.56■□□□□ 0.88
HMGXB4-203ENST00000420166 ZNF106Q9H2Y7 1883 aaKnown RBP20.56■□□□□ 0.88
HMGXB4-203ENST00000420166 SPTBN4Q9H254 2564 aa20.55■□□□□ 0.88
HMGXB4-203ENST00000420166 CACNB4O00305 520 aaPredicted RBP20.55■□□□□ 0.88
HMGXB4-203ENST00000420166 ECEL1O95672 775 aa20.55■□□□□ 0.88
HMGXB4-203ENST00000420166 PYGLP06737 847 aa20.55■□□□□ 0.88
HMGXB4-203ENST00000420166 BPIP17213 487 aa20.55■□□□□ 0.88
HMGXB4-203ENST00000420166 HTR1BP28222 390 aa20.55■□□□□ 0.88
HMGXB4-203ENST00000420166 VPS41P49754 854 aa20.55■□□□□ 0.88
HMGXB4-203ENST00000420166 IL9RQ01113 521 aa20.55■□□□□ 0.88
HMGXB4-203ENST00000420166 GPS1Q13098 491 aa20.55■□□□□ 0.88
HMGXB4-203ENST00000420166 EIF2B5Q13144 721 aaKnown RBP20.55■□□□□ 0.88
HMGXB4-203ENST00000420166 SLC14A1Q13336 389 aa20.55■□□□□ 0.88
HMGXB4-203ENST00000420166 TAF1AQ15573 450 aaPredicted RBP20.55■□□□□ 0.88
HMGXB4-203ENST00000420166 RSPO4Q2I0M5 234 aaPredicted RBP20.55■□□□□ 0.88
HMGXB4-203ENST00000420166 ALS2CLQ60I27 953 aa20.55■□□□□ 0.88
HMGXB4-203ENST00000420166 ADAMTSL4Q6UY14 1074 aa20.55■□□□□ 0.88
HMGXB4-203ENST00000420166 OR52K1Q8NGK4 314 aa20.55■□□□□ 0.88
HMGXB4-203ENST00000420166 BRSK1Q8TDC3 778 aa20.55■□□□□ 0.88
HMGXB4-203ENST00000420166 WDR92Q96MX6 357 aa20.55■□□□□ 0.88
HMGXB4-203ENST00000420166 AGAP2Q99490 1192 aa20.55■□□□□ 0.88
HMGXB4-203ENST00000420166 DNAJC28Q9NX36 388 aa20.55■□□□□ 0.88
HMGXB4-203ENST00000420166 PCYOX1Q9UHG3 505 aa20.55■□□□□ 0.88
HMGXB4-203ENST00000420166 PCDHGB2Q9Y5G2 931 aa20.55■□□□□ 0.88
HMGXB4-203ENST00000420166 CNOT1A5YKK6 2376 aaKnown RBP20.54■□□□□ 0.88
HMGXB4-203ENST00000420166 ARID1BQ8NFD5 2236 aaPredicted RBP20.54■□□□□ 0.88
HMGXB4-203ENST00000420166 CCDC188H7C350 402 aa20.54■□□□□ 0.88
HMGXB4-203ENST00000420166 BUD23O43709 281 aaKnown RBP20.54■□□□□ 0.88
HMGXB4-203ENST00000420166 PCDHGA12O60330 932 aa20.54■□□□□ 0.88
HMGXB4-203ENST00000420166 MYCLP1P12525 358 aaPredicted RBP20.54■□□□□ 0.88
HMGXB4-203ENST00000420166 CD59P13987 128 aa20.54■□□□□ 0.88
HMGXB4-203ENST00000420166 SDHBP21912 280 aa20.54■□□□□ 0.88
HMGXB4-203ENST00000420166 EPHA8P29322 1005 aaPredicted RBP20.54■□□□□ 0.88
HMGXB4-203ENST00000420166 CDK3Q00526 305 aa20.54■□□□□ 0.88
HMGXB4-203ENST00000420166 PPP1R21Q6ZMI0 780 aa20.54■□□□□ 0.88
HMGXB4-203ENST00000420166 SLCO2A1Q92959 643 aa20.54■□□□□ 0.88
HMGXB4-203ENST00000420166 PLEKHG4BQ96PX9 1271 aa20.54■□□□□ 0.88
HMGXB4-203ENST00000420166 LGR4Q9BXB1 951 aa20.54■□□□□ 0.88
HMGXB4-203ENST00000420166 BPIFA1Q9NP55 256 aa20.54■□□□□ 0.88
HMGXB4-203ENST00000420166 PIH1D1Q9NWS0 290 aaKnown RBP20.54■□□□□ 0.88
HMGXB4-203ENST00000420166 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.54■□□□□ 0.88
HMGXB4-203ENST00000420166 PKP3Q9Y446 797 aa20.54■□□□□ 0.88
HMGXB4-203ENST00000420166 ARL5AQ9Y689 179 aa20.54■□□□□ 0.88
HMGXB4-203ENST00000420166 PCNX2A6NKB5 2137 aa20.53■□□□□ 0.88
HMGXB4-203ENST00000420166 C2orf81A6NN90 581 aa20.53■□□□□ 0.88
HMGXB4-203ENST00000420166 PPFIA2O75334 1257 aa20.53■□□□□ 0.88
HMGXB4-203ENST00000420166 CRTAMO95727 393 aa20.53■□□□□ 0.88
HMGXB4-203ENST00000420166 CSF2P04141 144 aa20.53■□□□□ 0.88
HMGXB4-203ENST00000420166 NME1P15531 152 aaKnown RBP20.53■□□□□ 0.88
HMGXB4-203ENST00000420166 TPH1P17752 444 aa20.53■□□□□ 0.88
HMGXB4-203ENST00000420166 LPOP22079 712 aaPredicted RBP20.53■□□□□ 0.88
HMGXB4-203ENST00000420166 KELP23276 732 aa20.53■□□□□ 0.88
HMGXB4-203ENST00000420166 GRIA1P42261 906 aa20.53■□□□□ 0.88
HMGXB4-203ENST00000420166 CDH17Q12864 832 aa20.53■□□□□ 0.88
HMGXB4-203ENST00000420166 ZNF542PQ5EBM4 170 aa20.53■□□□□ 0.88
HMGXB4-203ENST00000420166 ZDHHC20Q5W0Z9 365 aa20.53■□□□□ 0.88
HMGXB4-203ENST00000420166 ENPP7Q6UWV6 458 aa20.53■□□□□ 0.88
HMGXB4-203ENST00000420166 KLHL7Q8IXQ5 586 aa20.53■□□□□ 0.88
HMGXB4-203ENST00000420166 DNAAF3Q8N9W5 541 aa20.53■□□□□ 0.88
HMGXB4-203ENST00000420166 ZSCAN5AQ9BUG6 496 aa20.53■□□□□ 0.88
HMGXB4-203ENST00000420166 CASS4Q9NQ75 786 aa20.53■□□□□ 0.88
HMGXB4-203ENST00000420166 KLQ9UEF7 1012 aa20.53■□□□□ 0.88
HMGXB4-203ENST00000420166 KLF15Q9UIH9 416 aa20.53■□□□□ 0.88
HMGXB4-203ENST00000420166 PNMA8BQ9ULN7 279 aaPredicted RBP20.53■□□□□ 0.88
HMGXB4-203ENST00000420166 TMEM202A6NGA9 273 aa20.52■□□□□ 0.88
HMGXB4-203ENST00000420166 FADS2P1A8MWK0 482 aa20.52■□□□□ 0.88
HMGXB4-203ENST00000420166 STX7O15400 261 aaKnown RBP20.52■□□□□ 0.88
HMGXB4-203ENST00000420166 TUBB4AP04350 444 aa20.52■□□□□ 0.88
HMGXB4-203ENST00000420166 TPSB2P20231 275 aa20.52■□□□□ 0.88
HMGXB4-203ENST00000420166 MAGEA6P43360 314 aa20.52■□□□□ 0.88
HMGXB4-203ENST00000420166 ZNF140P52738 457 aaPredicted RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms