RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 Q6ZVL8 140 aa6.97□□□□□ -1.29
COPS3-202ENST00000417352 DPPA4Q7L190 304 aa6.97□□□□□ -1.29
COPS3-202ENST00000417352 ZNF571Q7Z3V5 609 aaPredicted RBP6.97□□□□□ -1.29
COPS3-202ENST00000417352 SPRED1Q7Z699 444 aa6.97□□□□□ -1.29
COPS3-202ENST00000417352 FAM129CQ86XR2 697 aa6.97□□□□□ -1.29
COPS3-202ENST00000417352 LZTR1Q8N653 840 aa6.97□□□□□ -1.29
COPS3-202ENST00000417352 IL22RA1Q8N6P7 574 aa6.97□□□□□ -1.29
COPS3-202ENST00000417352 ARFGAP1Q8N6T3 406 aa6.97□□□□□ -1.29
COPS3-202ENST00000417352 KCTD6Q8NC69 237 aa6.97□□□□□ -1.29
COPS3-202ENST00000417352 GPR156Q8NFN8 814 aa6.97□□□□□ -1.29
COPS3-202ENST00000417352 FNIP1Q8TF40 1166 aa6.97□□□□□ -1.29
COPS3-202ENST00000417352 VOPP1Q96AW1 172 aa6.97□□□□□ -1.29
COPS3-202ENST00000417352 SGF29Q96ES7 293 aa6.97□□□□□ -1.29
COPS3-202ENST00000417352 TRIM11Q96F44 468 aa6.97□□□□□ -1.29
COPS3-202ENST00000417352 MED8Q96G25 268 aa6.97□□□□□ -1.29
COPS3-202ENST00000417352 LIN37Q96GY3 246 aaPredicted RBP6.97□□□□□ -1.29
COPS3-202ENST00000417352 BTBD6Q96KE9 485 aa6.97□□□□□ -1.29
COPS3-202ENST00000417352 EIF3CQ99613 913 aaKnown RBP6.97□□□□□ -1.29
COPS3-202ENST00000417352 SEMA4CQ9C0C4 833 aa6.97□□□□□ -1.29
COPS3-202ENST00000417352 TAAR2Q9P1P5 351 aa6.97□□□□□ -1.29
COPS3-202ENST00000417352 SUFUQ9UMX1 484 aa6.97□□□□□ -1.29
COPS3-202ENST00000417352 DGKBQ9Y6T7 804 aa6.97□□□□□ -1.29
COPS3-202ENST00000417352 KALRNO60229 2985 aa6.97□□□□□ -1.29
COPS3-202ENST00000417352 LRP4O75096 1905 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 PIEZO2Q9H5I5 2752 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 TSPAN11A1L157 253 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 LRRC10BA6NIK2 292 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 EFSO43281 561 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 NUDT21O43809 227 aaKnown RBP6.96□□□□□ -1.3
COPS3-202ENST00000417352 NOBOXO60393 691 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 SNX2O60749 519 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 LRCH4O75427 683 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 MAP3K6O95382 1288 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 CPNE6O95741 557 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 MBD3O95983 291 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 FGF1P05230 155 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 FAM87AP0C7U9 286 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 MYBL1P10243 752 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 CCNB1P14635 433 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 CSTF2P33240 577 aaKnown RBP eCLIP6.96□□□□□ -1.3
COPS3-202ENST00000417352 SERPINB6P35237 376 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 ACTR1BP42025 376 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 HCAR3P49019 387 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 ZNF165P49910 485 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 CDH6P55285 790 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 ACTR1AP61163 376 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 TPM4P67936 248 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 CDK3Q00526 305 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 NFKB2Q00653 900 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 PEX6Q13608 980 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 CNGA3Q16281 694 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 BOLA3Q53S33 107 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 AFMIDQ63HM1 303 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 USP45Q70EL2 814 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 VASH1Q7L8A9 365 aaPredicted RBP6.96□□□□□ -1.3
COPS3-202ENST00000417352 KDELC2Q7Z4H8 507 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 HSD11B1LQ7Z5J1 315 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 CLEC14AQ86T13 490 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 TSPAN33Q86UF1 283 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 TRIM74Q86UV6 250 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 ZNF761Q86XN6 746 aaPredicted RBP6.96□□□□□ -1.3
COPS3-202ENST00000417352 ARHGAP12Q8IWW6 846 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 PELI3Q8N2H9 469 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 CCNYQ8ND76 341 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 LRRN4Q8WUT4 740 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 PATE1Q8WXA2 126 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 AP2M1Q96CW1 435 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 ZNF599Q96NL3 588 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 PSKH2Q96QS6 385 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 NUDCD1Q96RS6 583 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 SLC38A3Q99624 504 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 SEMA3CQ99985 751 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 NUP85Q9BW27 656 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 TRIM4Q9C037 500 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 ETNK2Q9NVF9 386 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 KCNK4Q9NYG8 393 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 FOXJ2Q9P0K8 574 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 ANAPC7Q9UJX3 599 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 APPL1Q9UKG1 709 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 PHTF1Q9UMS5 762 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 PRKAB1Q9Y478 270 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 PLEKHM1Q9Y4G2 1056 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 MAP4K5Q9Y4K4 846 aa6.96□□□□□ -1.3
COPS3-202ENST00000417352 A0A1W2PQ67 120 aa6.95□□□□□ -1.3
COPS3-202ENST00000417352 CFAP69A5D8W1 941 aa6.95□□□□□ -1.3
COPS3-202ENST00000417352 NPIPB15A6NHN6 443 aaPredicted RBP6.95□□□□□ -1.3
COPS3-202ENST00000417352 MYO1FO00160 1098 aa6.95□□□□□ -1.3
COPS3-202ENST00000417352 DDX3XO00571 662 aaKnown RBP eCLIP6.95□□□□□ -1.31e-11■■■■■ 78.4
COPS3-202ENST00000417352 TRAFD1O14545 582 aaPredicted RBP6.95□□□□□ -1.3
COPS3-202ENST00000417352 NVLO15381 856 aaKnown RBP6.95□□□□□ -1.3
COPS3-202ENST00000417352 B4GAT1O43505 415 aa6.95□□□□□ -1.3
COPS3-202ENST00000417352 HEXIM1O94992 359 aaKnown RBP6.95□□□□□ -1.3
COPS3-202ENST00000417352 SLC4A1P02730 911 aa6.95□□□□□ -1.3
COPS3-202ENST00000417352 ATP1A1P05023 1023 aaKnown RBP6.95□□□□□ -1.3
COPS3-202ENST00000417352 CEACAM5P06731 702 aa6.95□□□□□ -1.3
COPS3-202ENST00000417352 RARAP10276 462 aa6.95□□□□□ -1.3
COPS3-202ENST00000417352 LIPCP11150 499 aa6.95□□□□□ -1.3
COPS3-202ENST00000417352 GZMAP12544 262 aa6.95□□□□□ -1.3
COPS3-202ENST00000417352 CCL4P13236 92 aa6.95□□□□□ -1.3
COPS3-202ENST00000417352 TCF4P15884 667 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms