RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 MYLKQ15746 1914 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 UNC79Q9P2D8 2635 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 J3KR12 359 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 GJB3O75712 270 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 LATS1O95835 1130 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 F11P03951 625 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 MPOP05164 745 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 SERPINF2P08697 491 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 CHRM1P11229 460 aaPredicted RBP17.16■□□□□ 0.34
PTPRC-206ENST00000413409 PAMP19021 973 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 NMBRP28336 390 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 AVPR1AP37288 418 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 SKIV2L2P42285 1042 aaKnown RBP17.16■□□□□ 0.34
PTPRC-206ENST00000413409 POLD2P49005 469 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 CDH4P55283 916 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 PDE1BQ01064 536 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 CDK18Q07002 472 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 PDE1CQ14123 709 aaPredicted RBP17.16■□□□□ 0.34
PTPRC-206ENST00000413409 DUOXA1Q1HG43 343 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 FAM133BQ5BKY9 247 aaKnown RBP17.16■□□□□ 0.34
PTPRC-206ENST00000413409 CHST9Q7L1S5 443 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 LCA5Q86VQ0 697 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 LGI2Q8N0V4 545 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 CPA6Q8N4T0 437 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 TRIM55Q9BYV6 548 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 SLC13A1Q9BZW2 595 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 NACA2Q9H009 215 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 MAGEH1Q9H213 219 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 NT5MQ9NPB1 228 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 SNX15Q9NRS6 342 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 DNAAF2Q9NVR5 837 aaKnown RBP17.16■□□□□ 0.34
PTPRC-206ENST00000413409 UXTQ9UBK9 157 aaPredicted RBP17.16■□□□□ 0.34
PTPRC-206ENST00000413409 RAI2Q9Y5P3 530 aa17.16■□□□□ 0.34
PTPRC-206ENST00000413409 A0A087WV48 116 aa17.15■□□□□ 0.34
PTPRC-206ENST00000413409 COCHO43405 550 aa17.15■□□□□ 0.34
PTPRC-206ENST00000413409 PLIN3O60664 434 aa17.15■□□□□ 0.34
PTPRC-206ENST00000413409 PMPCBO75439 489 aa17.15■□□□□ 0.34
PTPRC-206ENST00000413409 UBOX5O94941 541 aa17.15■□□□□ 0.34
PTPRC-206ENST00000413409 NEFHP12036 1026 aa17.15■□□□□ 0.34
PTPRC-206ENST00000413409 TPH1P17752 444 aa17.15■□□□□ 0.34
PTPRC-206ENST00000413409 OR1E1P30953 314 aa17.15■□□□□ 0.34
PTPRC-206ENST00000413409 SETDB1Q15047 1291 aa17.15■□□□□ 0.34
PTPRC-206ENST00000413409 HSP90AA5PQ58FG0 334 aa17.15■□□□□ 0.34
PTPRC-206ENST00000413409 ALG1LQ6GMV1 187 aa17.15■□□□□ 0.34
PTPRC-206ENST00000413409 SFTPA1Q8IWL2 248 aa17.15■□□□□ 0.34
PTPRC-206ENST00000413409 DEFB119Q8N690 84 aa17.15■□□□□ 0.34
PTPRC-206ENST00000413409 GCNAQ96QF7 691 aa17.15■□□□□ 0.34
PTPRC-206ENST00000413409 GPR22Q99680 433 aa17.15■□□□□ 0.34
PTPRC-206ENST00000413409 DDX50Q9BQ39 737 aaKnown RBP17.15■□□□□ 0.34
PTPRC-206ENST00000413409 FAM167BQ9BTA0 163 aa17.15■□□□□ 0.34
PTPRC-206ENST00000413409 RHOJQ9H4E5 214 aa17.15■□□□□ 0.34
PTPRC-206ENST00000413409 PDFQ9HBH1 243 aa17.15■□□□□ 0.34
PTPRC-206ENST00000413409 IARS2Q9NSE4 1012 aaKnown RBP17.15■□□□□ 0.34
PTPRC-206ENST00000413409 TREX1Q9NSU2 369 aa17.15■□□□□ 0.34
PTPRC-206ENST00000413409 DUS2Q9NX74 493 aaKnown RBP17.15■□□□□ 0.34
PTPRC-206ENST00000413409 WNT6Q9Y6F9 365 aa17.15■□□□□ 0.34
PTPRC-206ENST00000413409 CAPN7Q9Y6W3 813 aa17.15■□□□□ 0.34
PTPRC-206ENST00000413409 DENND4CQ5VZ89 1909 aa17.14■□□□□ 0.34
PTPRC-206ENST00000413409 HEATR9A2RTY3 570 aa17.14■□□□□ 0.33
PTPRC-206ENST00000413409 TK2O00142 265 aa17.14■□□□□ 0.33
PTPRC-206ENST00000413409 ARHGAP33O14559 1287 aa17.14■□□□□ 0.33
PTPRC-206ENST00000413409 CLDN11O75508 207 aa17.14■□□□□ 0.33
PTPRC-206ENST00000413409 MMP2P08253 660 aa17.14■□□□□ 0.33
PTPRC-206ENST00000413409 TYK2P29597 1187 aa17.14■□□□□ 0.33
PTPRC-206ENST00000413409 OPRD1P41143 372 aa17.14■□□□□ 0.33
PTPRC-206ENST00000413409 CSRP3P50461 194 aa17.14■□□□□ 0.33
PTPRC-206ENST00000413409 CYP4F3Q08477 520 aa17.14■□□□□ 0.33
PTPRC-206ENST00000413409 SLC10A7Q0GE19 358 aa17.14■□□□□ 0.33
PTPRC-206ENST00000413409 SF3A3Q12874 501 aaKnown RBP eCLIP17.14■□□□□ 0.33
PTPRC-206ENST00000413409 BNIP1Q12981 228 aa17.14■□□□□ 0.33
PTPRC-206ENST00000413409 LBRQ14739 615 aaKnown RBP17.14■□□□□ 0.33
PTPRC-206ENST00000413409 EML3Q32P44 896 aa17.14■□□□□ 0.33
PTPRC-206ENST00000413409 CIR1Q86X95 450 aaPredicted RBP17.14■□□□□ 0.33
PTPRC-206ENST00000413409 NUDCD3Q8IVD9 361 aa17.14■□□□□ 0.33
PTPRC-206ENST00000413409 POLR1EQ9GZS1 481 aaKnown RBP17.14■□□□□ 0.33
PTPRC-206ENST00000413409 LINC00597Q9H2U6 94 aa17.14■□□□□ 0.33
PTPRC-206ENST00000413409 IL1RAPL1Q9NZN1 696 aa17.14■□□□□ 0.33
PTPRC-206ENST00000413409 EMCNQ9ULC0 261 aa17.14■□□□□ 0.33
PTPRC-206ENST00000413409 ANKRD6Q9Y2G4 727 aa17.14■□□□□ 0.33
PTPRC-206ENST00000413409 CFAP73A6NFT4 308 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 SNNO75324 88 aaPredicted RBP17.13■□□□□ 0.33
PTPRC-206ENST00000413409 STC2O76061 302 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 PROCP04070 461 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 HOXD9P28356 352 aaPredicted RBP17.13■□□□□ 0.33
PTPRC-206ENST00000413409 SLC6A4P31645 630 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 HOXD12P35452 270 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 CD86P42081 329 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 ARCN1P48444 511 aaKnown RBP17.13■□□□□ 0.33
PTPRC-206ENST00000413409 OCRLQ01968 901 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 ILF2Q12905 390 aaKnown RBP17.13■□□□□ 0.33
PTPRC-206ENST00000413409 ZNF235Q14590 738 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 RFTN1Q14699 578 aaPredicted RBP17.13■□□□□ 0.33
PTPRC-206ENST00000413409 POU6F1Q14863 301 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 GAB4Q2WGN9 574 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 CCDC153Q494R4 210 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 KIAA0408Q6ZU52 694 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 NLRP9Q7RTR0 991 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 CLEC14AQ86T13 490 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 ZNF605Q86T29 641 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 ZNF354CQ86Y25 554 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms