RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 TMX4Q9H1E5 349 aaPredicted RBP2.54□□□□□ -2
HMGB3P2-201ENST00000411913 Q9N2J8 555 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.54□□□□□ -2
HMGB3P2-201ENST00000411913 ZDHHC7Q9NXF8 308 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 MPP6Q9NZW5 540 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 CWC15Q9P013 229 aaKnown RBP2.54□□□□□ -2
HMGB3P2-201ENST00000411913 UPB1Q9UBR1 384 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 FBXO40Q9UH90 709 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 SARDHQ9UL12 918 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 ZNF215Q9UL58 517 aaPredicted RBP2.54□□□□□ -2
HMGB3P2-201ENST00000411913 CAMK2AQ9UQM7 478 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 TNNQ9UQP3 1299 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 RRP15Q9Y3B9 282 aaKnown RBP2.54□□□□□ -2
HMGB3P2-201ENST00000411913 KNSTRNQ9Y448 316 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 CLDN16Q9Y5I7 305 aa2.54□□□□□ -2
HMGB3P2-201ENST00000411913 PBRM1Q86U86 1689 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 ASXL1Q8IXJ9 1541 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 MED14O60244 1454 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 MYOM2P54296 1465 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 CCDC141Q6ZP82 1450 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 MSH6P52701 1360 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 SPAG9O60271 1321 aaKnown RBP2.53□□□□□ -2
HMGB3P2-201ENST00000411913 CCDC171Q6TFL3 1326 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 A0A1B0GU03 582 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.53□□□□□ -2
HMGB3P2-201ENST00000411913 EIF3CLB5ME19 914 aaKnown RBP2.53□□□□□ -2
HMGB3P2-201ENST00000411913 MAP2K7O14733 419 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 ASAP2O43150 1006 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 ZG16O60844 167 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 RTN2O75298 545 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 SLU7O95391 586 aaKnown RBP2.53□□□□□ -2
HMGB3P2-201ENST00000411913 LCKP06239 509 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 IVLP07476 585 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 FCGR2AP12318 317 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 LAMP2P13473 410 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 ACTN2P35609 894 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 SKIV2L2P42285 1042 aaKnown RBP2.53□□□□□ -2
HMGB3P2-201ENST00000411913 BLKP51451 505 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 EIF3BP55884 814 aaKnown RBP2.53□□□□□ -2
HMGB3P2-201ENST00000411913 ARF3P61204 181 aaPredicted RBP2.53□□□□□ -2
HMGB3P2-201ENST00000411913 ARF1P84077 181 aaKnown RBP2.53□□□□□ -2
HMGB3P2-201ENST00000411913 EFNB1P98172 346 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 ZBTB16Q05516 673 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 ST3GAL1Q11201 340 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 GRIK3Q13003 919 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 MAMLD1Q13495 774 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 EIF4A2Q14240 407 aaKnown RBP2.53□□□□□ -2
HMGB3P2-201ENST00000411913 GALNT3Q14435 633 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 WDR43Q15061 677 aaKnown RBP eCLIP2.53□□□□□ -2
HMGB3P2-201ENST00000411913 TBCEQ15813 527 aaPredicted RBP2.53□□□□□ -2
HMGB3P2-201ENST00000411913 RPE65Q16518 533 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 TTC31Q49AM3 519 aaPredicted RBP2.53□□□□□ -2
HMGB3P2-201ENST00000411913 C5orf22Q49AR2 442 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 TEX35Q5T0J7 233 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 FAM171A1Q5VUB5 890 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 SNX30Q5VWJ9 437 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 TMEM268Q5VZI3 342 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 ZSCAN25Q6NSZ9 544 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 RBM43Q6ZSC3 357 aaKnown RBP2.53□□□□□ -2
HMGB3P2-201ENST00000411913 RRM2BQ7LG56 351 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 CPLX4Q7Z7G2 160 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 NBPF5PQ86XG9 351 aaPredicted RBP2.53□□□□□ -2
HMGB3P2-201ENST00000411913 C10orf67Q8IYJ2 551 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 ADSSL1Q8N142 457 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 CPXM2Q8N436 756 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 SLC25A41Q8N5S1 370 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 OTUD6BQ8N6M0 293 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 C11orf65Q8NCR3 313 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 CCDC191Q8NCU4 936 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 NEK11Q8NG66 645 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 LILRB1Q8NHL6 650 aaPredicted RBP2.53□□□□□ -2
HMGB3P2-201ENST00000411913 ETNPPLQ8TBG4 499 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 METTL6Q8TCB7 284 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 CREB3L4Q8TEY5 395 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 HDAC7Q8WUI4 952 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 IP6K1Q92551 441 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 HSPH1Q92598 858 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 ANKRD9Q96BM1 317 aaPredicted RBP2.53□□□□□ -2
HMGB3P2-201ENST00000411913 SAAL1Q96ER3 474 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 FAM210AQ96ND0 272 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 UHRF2Q96PU4 802 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 TEFMQ96QE5 360 aaKnown RBP2.53□□□□□ -2
HMGB3P2-201ENST00000411913 MPHOSPH8Q99549 860 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 BARD1Q99728 777 aaKnown RBP2.53□□□□□ -2
HMGB3P2-201ENST00000411913 UTP14AQ9BVJ6 771 aaKnown RBP2.53□□□□□ -2
HMGB3P2-201ENST00000411913 TEX13AQ9BXU3 409 aaPredicted RBP2.53□□□□□ -2
HMGB3P2-201ENST00000411913 FRMD8Q9BZ67 464 aaPredicted RBP2.53□□□□□ -2
HMGB3P2-201ENST00000411913 SLC25A18Q9H1K4 315 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 RANBP17Q9H2T7 1088 aaKnown RBP2.53□□□□□ -2
HMGB3P2-201ENST00000411913 TTYH1Q9H313 450 aaPredicted RBP2.53□□□□□ -2
HMGB3P2-201ENST00000411913 SCRT2Q9NQ03 307 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 KRT84Q9NSB2 600 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 IL1RAPL1Q9NZN1 696 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 DHDHQ9UQ10 334 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 EXOC6BQ9Y2D4 811 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 ADGBQ8N7X0 1667 aa2.53□□□□□ -2
HMGB3P2-201ENST00000411913 BICRAQ9NZM4 1560 aa2.53□□□□□ -2.01
HMGB3P2-201ENST00000411913 KAT6BQ8WYB5 2073 aa2.53□□□□□ -2.01
HMGB3P2-201ENST00000411913 WDR62O43379 1518 aa2.52□□□□□ -2.01
HMGB3P2-201ENST00000411913 SYNJ2O15056 1496 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms