RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 CR2P20023 1033 aa16.65■□□□□ 0.26
MRPL55-220ENST00000411464 TSPAN7P41732 249 aa16.65■□□□□ 0.26
MRPL55-220ENST00000411464 RAB15P59190 212 aa16.65■□□□□ 0.26
MRPL55-220ENST00000411464 GPLD1P80108 840 aa16.65■□□□□ 0.26
MRPL55-220ENST00000411464 DPTQ07507 201 aa16.65■□□□□ 0.26
MRPL55-220ENST00000411464 SRSF1Q07955 248 aaKnown RBP eCLIP16.65■□□□□ 0.26
MRPL55-220ENST00000411464 DPYSQ14117 519 aa16.65■□□□□ 0.26
MRPL55-220ENST00000411464 NSMCE1Q8WV22 266 aa16.65■□□□□ 0.26
MRPL55-220ENST00000411464 OR2M4Q96R27 311 aa16.65■□□□□ 0.26
MRPL55-220ENST00000411464 OCIAD1Q9NX40 245 aa16.65■□□□□ 0.26
MRPL55-220ENST00000411464 TMEM98Q9Y2Y6 226 aa16.65■□□□□ 0.26
MRPL55-220ENST00000411464 TLN1Q9Y490 2541 aaKnown RBP16.65■□□□□ 0.26
MRPL55-220ENST00000411464 TRBV23OR9-2A0A075B6M9 112 aa16.64■□□□□ 0.25
MRPL55-220ENST00000411464 LRRC10BA6NIK2 292 aa16.64■□□□□ 0.25
MRPL55-220ENST00000411464 H3BRJ5 948 aa16.64■□□□□ 0.25
MRPL55-220ENST00000411464 LHCGRP22888 699 aa16.64■□□□□ 0.25
MRPL55-220ENST00000411464 CSF2RBP32927 897 aa16.64■□□□□ 0.25
MRPL55-220ENST00000411464 ARL4AP40617 200 aa16.64■□□□□ 0.25
MRPL55-220ENST00000411464 TRAF2Q12933 501 aa16.64■□□□□ 0.25
MRPL55-220ENST00000411464 ARMC12Q5T9G4 340 aa16.64■□□□□ 0.25
MRPL55-220ENST00000411464 TMCO3Q6UWJ1 677 aa16.64■□□□□ 0.25
MRPL55-220ENST00000411464 IRF2BP2Q7Z5L9 587 aa16.64■□□□□ 0.25
MRPL55-220ENST00000411464 TSPAN33Q86UF1 283 aa16.64■□□□□ 0.25
MRPL55-220ENST00000411464 NDUFAF2Q8N183 169 aa16.64■□□□□ 0.25
MRPL55-220ENST00000411464 PGBD5Q8N414 524 aa16.64■□□□□ 0.25
MRPL55-220ENST00000411464 OR10G6Q8NH81 332 aa16.64■□□□□ 0.25
MRPL55-220ENST00000411464 FNIP1Q8TF40 1166 aa16.64■□□□□ 0.25
MRPL55-220ENST00000411464 KIAA1143Q96AT1 154 aaPredicted RBP16.64■□□□□ 0.25
MRPL55-220ENST00000411464 AP2M1Q96CW1 435 aa16.64■□□□□ 0.25
MRPL55-220ENST00000411464 SCARF2Q96GP6 870 aaPredicted RBP16.64■□□□□ 0.25
MRPL55-220ENST00000411464 SLC38A3Q99624 504 aa16.64■□□□□ 0.25
MRPL55-220ENST00000411464 MGME1Q9BQP7 344 aa16.64■□□□□ 0.25
MRPL55-220ENST00000411464 TMEM9Q9P0T7 183 aa16.64■□□□□ 0.25
MRPL55-220ENST00000411464 PLEKHM1Q9Y4G2 1056 aa16.64■□□□□ 0.25
MRPL55-220ENST00000411464 LRP4O75096 1905 aa16.63■□□□□ 0.25
MRPL55-220ENST00000411464 PGLSO95336 258 aa16.63■□□□□ 0.25
MRPL55-220ENST00000411464 PEX11BO96011 259 aa16.63■□□□□ 0.25
MRPL55-220ENST00000411464 CTPS1P17812 591 aa16.63■□□□□ 0.25
MRPL55-220ENST00000411464 MAN1A1P33908 653 aa16.63■□□□□ 0.25
MRPL55-220ENST00000411464 MAXP61244 160 aa16.63■□□□□ 0.25
MRPL55-220ENST00000411464 LRP8Q14114 963 aa16.63■□□□□ 0.25
MRPL55-220ENST00000411464 SKIDA1Q1XH10 827 aa16.63■□□□□ 0.25
MRPL55-220ENST00000411464 RALGPS1Q5JS13 557 aa16.63■□□□□ 0.25
MRPL55-220ENST00000411464 MARC1Q5VT66 337 aa16.63■□□□□ 0.25
MRPL55-220ENST00000411464 ANKS6Q68DC2 871 aa16.63■□□□□ 0.25
MRPL55-220ENST00000411464 CYP4V2Q6ZWL3 525 aaPredicted RBP16.63■□□□□ 0.25
MRPL55-220ENST00000411464 MARK2Q7KZI7 788 aaKnown RBP16.63■□□□□ 0.25
MRPL55-220ENST00000411464 TECPR1Q7Z6L1 1165 aa16.63■□□□□ 0.25
MRPL55-220ENST00000411464 SLC45A3Q96JT2 553 aa16.63■□□□□ 0.25
MRPL55-220ENST00000411464 TEFMQ96QE5 360 aaKnown RBP16.63■□□□□ 0.25
MRPL55-220ENST00000411464 MCCC1Q96RQ3 725 aaPredicted RBP16.63■□□□□ 0.25
MRPL55-220ENST00000411464 TRIM7Q9C029 511 aa16.63■□□□□ 0.25
MRPL55-220ENST00000411464 GPN2Q9H9Y4 310 aaPredicted RBP16.63■□□□□ 0.25
MRPL55-220ENST00000411464 PDP2Q9P2J9 529 aa16.63■□□□□ 0.25
MRPL55-220ENST00000411464 CD84Q9UIB8 345 aa16.63■□□□□ 0.25
MRPL55-220ENST00000411464 A8MU76 341 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 NKX2-8O15522 239 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 DUX1O43812 170 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 MAFKO60675 156 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 LRCH4O75427 683 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 FTLP02792 175 aaPredicted RBP16.62■□□□□ 0.25
MRPL55-220ENST00000411464 ATP1A3P13637 1013 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 AMPD1P23109 780 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 MAP4P27816 1152 aaKnown RBP16.62■□□□□ 0.25
MRPL55-220ENST00000411464 MMP13P45452 471 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 FASLGP48023 281 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 MYL5Q02045 173 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 PTPRRQ15256 657 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 PYCR3Q53H96 274 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 BOLA3Q53S33 107 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 SNAP47Q5SQN1 464 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 ADAMTSL4Q6UY14 1074 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 ZNF761Q86XN6 746 aaPredicted RBP16.62■□□□□ 0.25
MRPL55-220ENST00000411464 GALNT13Q8IUC8 556 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 NLGN4XQ8N0W4 816 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 ATPAF2Q8N5M1 289 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 NLGN4YQ8NFZ3 816 aaPredicted RBP16.62■□□□□ 0.25
MRPL55-220ENST00000411464 SLC37A2Q8TED4 501 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 SYT11Q9BT88 431 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 EFHD1Q9BUP0 239 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 EPN3Q9H201 632 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 ABCG8Q9H221 673 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 ANAPC2Q9UJX6 822 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 PILRAQ9UKJ1 303 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 PPIL1Q9Y3C6 166 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 LRRK1Q38SD2 2015 aa16.62■□□□□ 0.25
MRPL55-220ENST00000411464 SCN8AQ9UQD0 1980 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 PYGLP06737 847 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 PCK1P35558 622 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 CASRP41180 1078 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 NOP2P46087 812 aaKnown RBP16.61■□□□□ 0.25
MRPL55-220ENST00000411464 CDH6P55285 790 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 MC2RQ01718 297 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 UBAP2LQ14157 1087 aaKnown RBP16.61■□□□□ 0.25
MRPL55-220ENST00000411464 DPYSL2Q16555 572 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 LRRC66Q68CR7 880 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 WDR74Q6RFH5 385 aaPredicted RBP16.61■□□□□ 0.25
MRPL55-220ENST00000411464 CEACAM20Q6UY09 585 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 RFLNAQ6ZTI6 216 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 KDELC2Q7Z4H8 507 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms