RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 DAG1Q14118 895 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 FZD2Q14332 565 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 MTF1Q14872 753 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 GUSBP1Q15486 140 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 DLG2Q15700 870 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 FBXL19-AS1Q494R0 122 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 KCNT1Q5JUK3 1230 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 SYDE2Q5VT97 1194 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 CACHD1Q5VU97 1274 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 RNLSQ5VYX0 342 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 RFWD3Q6PCD5 774 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 KRTAP26-1Q6PEX3 210 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 HAGHLQ6PII5 290 aaPredicted RBP-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 SLC25A47Q6Q0C1 308 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 KCNT2Q6UVM3 1135 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 C16orf59Q7L2K0 433 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 NEGR1Q7Z3B1 354 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZNF554Q86TJ5 538 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 CARM1Q86X55 608 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 VSIG1Q86XK7 387 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 TRMT2AQ8IZ69 625 aaKnown RBP-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 EXOC3-AS1Q8N2X6 119 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZNF433Q8N7K0 673 aaPredicted RBP-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZNF614Q8N883 585 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZDHHC22Q8N966 263 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 OR11H6Q8NGC7 330 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 LINC01006Q8NI28 216 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 KLF14Q8TD94 323 aaPredicted RBP-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 DCAF4Q8WV16 495 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 XAGE5Q8WWM1 108 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 TOMM40LQ969M1 308 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 ARHGEF26Q96DR7 871 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 FOPNLQ96NB1 174 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 TM2D2Q9BX73 214 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 IFIH1Q9BYX4 1025 aaKnown RBP-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 DHX35Q9H5Z1 703 aaKnown RBP-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 LY9Q9HBG7 655 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 PNPLA8Q9NP80 782 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 SPHK2Q9NRA0 654 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 LINC00846Q9NV44 126 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 ETNK2Q9NVF9 386 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 ABCD2Q9UBJ2 740 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 KCNN3Q9UGI6 736 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 USP18Q9UMW8 372 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZNF711Q9Y462 761 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 SPO11Q9Y5K1 396 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 SLC25A15Q9Y619 301 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 C5orf42Q9H799 3197 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 SPTA1P02549 2419 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 NACADO15069 1562 aa-1.55□□□□□ -2.66
RNU4-88P-201ENST00000411220 LRBAP50851 2863 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 PLXNA3P51805 1871 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 A0A087WWV3 80 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 TNFSF12-TNFSF13A0A0A6YY99 330 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 TRAV40A0A0B4J280 105 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 SLC22A23A1A5C7 686 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 FAM90A20PA6NIJ5 464 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 ACOD1A6NK06 481 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 KCNJ18B7U540 433 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 C4orf51C9J302 202 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 TMEM178BH3BS89 294 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 K7EQZ3 153 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 TREHO43280 583 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 ICOSLGO75144 302 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 HIP1RO75146 1068 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 SLC43A1O75387 559 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 VNN2O95498 520 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 MT1GP13640 62 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 CD1DP15813 335 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 CD53P19397 219 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 XPAP23025 273 aaPredicted RBP-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 PTX3P26022 381 aaPredicted RBP-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 SOX5P35711 763 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 AVPR1AP37288 418 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 GIPRP48546 466 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 AMTP48728 403 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 EVX1P49640 407 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 PEX5P50542 639 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 NRG3P56975 720 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 CTXN1P60606 82 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 TLE3Q04726 772 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 DEUP1Q05D60 604 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 MYBPHQ13203 477 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 PRPF4BQ13523 1007 aaKnown RBP-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 KCNB1Q14721 858 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 GPNMBQ14956 572 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 INAVAQ3KP66 663 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 SPINK9Q5DT21 86 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 XKR7Q5GH72 579 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 KIAA1324Q6UXG2 1013 aaKnown RBP-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 SIGLEC15Q6ZMC9 328 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZFP2Q6ZN57 461 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 DENND5BQ6ZUT9 1274 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 SEM1Q6ZVN7 128 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 SYVN1Q86TM6 617 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 TSPAN33Q86UF1 283 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 TRABD2AQ86V40 505 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 LYSMD2Q8IV50 215 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 FAM186BQ8IYM0 893 aa-1.56□□□□□ -2.66
RNU4-88P-201ENST00000411220 ADGRF4Q8IZF3 695 aa-1.56□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms