RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 AP1B1Q10567 949 aa5.23□□□□□ -1.57
LSM5-206ENST00000409987 E2F5Q15329 346 aa5.23□□□□□ -1.57
LSM5-206ENST00000409987 RBMS2Q15434 407 aaKnown RBP5.23□□□□□ -1.57
LSM5-206ENST00000409987 EZH2Q15910 746 aaKnown RBP5.23□□□□□ -1.57
LSM5-206ENST00000409987 KRT80Q6KB66 452 aa5.23□□□□□ -1.57
LSM5-206ENST00000409987 CNSTQ6PJW8 725 aa5.23□□□□□ -1.57
LSM5-206ENST00000409987 HAPLN4Q86UW8 402 aa5.23□□□□□ -1.57
LSM5-206ENST00000409987 POC5Q8NA72 575 aa5.23□□□□□ -1.57
LSM5-206ENST00000409987 SPC24Q8NBT2 197 aa5.23□□□□□ -1.57
LSM5-206ENST00000409987 MOSPD2Q8NHP6 518 aa5.23□□□□□ -1.57
LSM5-206ENST00000409987 HUS1BQ8NHY5 278 aa5.23□□□□□ -1.57
LSM5-206ENST00000409987 GSDMBQ8TAX9 411 aa5.23□□□□□ -1.57
LSM5-206ENST00000409987 SLC35F5Q8WV83 523 aa5.23□□□□□ -1.57
LSM5-206ENST00000409987 PRPF31Q8WWY3 499 aaKnown RBP5.23□□□□□ -1.57
LSM5-206ENST00000409987 ZKSCAN4Q969J2 545 aaPredicted RBP5.23□□□□□ -1.57
LSM5-206ENST00000409987 RMDN1Q96DB5 314 aa5.23□□□□□ -1.57
LSM5-206ENST00000409987 ARHGEF26Q96DR7 871 aa5.23□□□□□ -1.57
LSM5-206ENST00000409987 CCDC43Q96MW1 224 aaKnown RBP5.23□□□□□ -1.57
LSM5-206ENST00000409987 GBP5Q96PP8 586 aa5.23□□□□□ -1.57
LSM5-206ENST00000409987 ABHD1Q96SE0 405 aa5.23□□□□□ -1.57
LSM5-206ENST00000409987 CITED2Q99967 270 aaPredicted RBP5.23□□□□□ -1.57
LSM5-206ENST00000409987 KLHL4Q9C0H6 718 aa5.23□□□□□ -1.57
LSM5-206ENST00000409987 DNAI2Q9GZS0 605 aa5.23□□□□□ -1.57
LSM5-206ENST00000409987 PDZD7Q9H5P4 517 aa5.23□□□□□ -1.57
LSM5-206ENST00000409987 RANGRFQ9HD47 186 aaPredicted RBP5.23□□□□□ -1.57
LSM5-206ENST00000409987 CYSLTR2Q9NS75 346 aa5.23□□□□□ -1.57
LSM5-206ENST00000409987 PDRG1Q9NUG6 133 aa5.23□□□□□ -1.57
LSM5-206ENST00000409987 TUBA8Q9NY65 449 aaPredicted RBP5.23□□□□□ -1.57
LSM5-206ENST00000409987 SELENONQ9NZV5 590 aa5.23□□□□□ -1.57
LSM5-206ENST00000409987 C11orf21Q9P2W6 132 aa5.23□□□□□ -1.57
LSM5-206ENST00000409987 BTBD3Q9Y2F9 522 aa5.23□□□□□ -1.57
LSM5-206ENST00000409987 CEPT1Q9Y6K0 416 aa5.23□□□□□ -1.57
LSM5-206ENST00000409987 MMP2P08253 660 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 MYBL1P10243 752 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 PRF1P14222 555 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 GABRB1P18505 474 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 CD38P28907 300 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 KIF5BP33176 963 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 GP5P40197 560 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 CLCN3P51790 818 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 MRPL12P52815 198 aaKnown RBP5.22□□□□□ -1.57
LSM5-206ENST00000409987 RRP1P56182 461 aaKnown RBP5.22□□□□□ -1.57
LSM5-206ENST00000409987 DDR1Q08345 913 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 ITGADQ13349 1161 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 SLMAPQ14BN4 828 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 PCLAFQ15004 111 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 SMN1Q16637 294 aaKnown RBP5.22□□□□□ -1.57
LSM5-206ENST00000409987 ZNF674Q2M3X9 581 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 ASTE1Q2TB18 679 aaPredicted RBP5.22□□□□□ -1.57
LSM5-206ENST00000409987 ODF3L2Q3SX64 289 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 C9orf152Q5JTZ5 239 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 KIAA0930Q6ICG6 404 aaPredicted RBP5.22□□□□□ -1.57
LSM5-206ENST00000409987 ALKBH5Q6P6C2 394 aaKnown RBP5.22□□□□□ -1.57
LSM5-206ENST00000409987 PARM1Q6UWI2 310 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 CRELD2Q6UXH1 353 aaPredicted RBP5.22□□□□□ -1.57
LSM5-206ENST00000409987 GLDNQ6ZMI3 551 aaPredicted RBP5.22□□□□□ -1.57
LSM5-206ENST00000409987 CLEC17AQ6ZS10 378 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 CHST3Q7LGC8 479 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 METTL23Q86XA0 190 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 LINC00346Q8IVM7 164 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 SFTPA2Q8IWL1 248 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 DNAJC10Q8IXB1 793 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 MB21D2Q8IYB1 491 aaPredicted RBP5.22□□□□□ -1.57
LSM5-206ENST00000409987 CCAR2Q8N163 923 aaKnown RBP5.22□□□□□ -1.57
LSM5-206ENST00000409987 ZBTB2Q8N680 514 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 ARFGAP1Q8N6T3 406 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 SYT2Q8N9I0 419 aaPredicted RBP5.22□□□□□ -1.57
LSM5-206ENST00000409987 ZNF548Q8NEK5 533 aaPredicted RBP5.22□□□□□ -1.57
LSM5-206ENST00000409987 MPLKIPQ8TAP9 179 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 TMEM163Q8TC26 289 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 PPP1R13BQ96KQ4 1090 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 SLITRK1Q96PX8 696 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 RAB3IPQ96QF0 476 aaPredicted RBP5.22□□□□□ -1.57
LSM5-206ENST00000409987 GCNAQ96QF7 691 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 OPA3Q9H6K4 179 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 FZD3Q9NPG1 666 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.22□□□□□ -1.57
LSM5-206ENST00000409987 SIRT3Q9NTG7 399 aaPredicted RBP5.22□□□□□ -1.57
LSM5-206ENST00000409987 MTMR6Q9Y217 621 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 NFE2L3Q9Y4A8 694 aa5.22□□□□□ -1.57
LSM5-206ENST00000409987 I6L893 689 aaPredicted RBP5.21□□□□□ -1.58
LSM5-206ENST00000409987 CPLX1O14810 134 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 SCAMP1O15126 338 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 HCRTR2O43614 444 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 LDB2O43679 373 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 FMO6PO60774 539 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 ZC3H11AO75152 810 aaKnown RBP eCLIP5.21□□□□□ -1.58
LSM5-206ENST00000409987 SLC25A12O75746 678 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 IGHDP01880 384 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 FGBP02675 491 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 RB1P06400 928 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 CCDC175P0C221 793 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 SELLP14151 372 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 ZNF182P17025 639 aaPredicted RBP5.21□□□□□ -1.58
LSM5-206ENST00000409987 TNFRSF1BP20333 461 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 MYF6P23409 242 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 TLX1P31314 330 aaPredicted RBP5.21□□□□□ -1.58
LSM5-206ENST00000409987 NRIP1P48552 1158 aa5.21□□□□□ -1.58
LSM5-206ENST00000409987 ALDH7A1P49419 539 aaKnown RBP5.21□□□□□ -1.58
LSM5-206ENST00000409987 RASSF2P50749 326 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms