RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 BRD8Q9H0E9 1235 aa17.65■□□□□ 0.42
LSM5-204ENST00000409909 SUDS3Q9H7L9 328 aaPredicted RBP17.65■□□□□ 0.42
LSM5-204ENST00000409909 CARS2Q9HA77 564 aaKnown RBP17.65■□□□□ 0.42
LSM5-204ENST00000409909 hCG_1818297A0A087WSY0 165 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 TLX3O43711 291 aaPredicted RBP17.64■□□□□ 0.41
LSM5-204ENST00000409909 BRINP1O60477 761 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 USP12O75317 370 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 ZRANB2O95218 330 aaKnown RBP eCLIP17.64■□□□□ 0.41
LSM5-204ENST00000409909 GPR1P46091 355 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 NR2C2P49116 596 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 GALNT3Q14435 633 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 ISXQ2M1V0 245 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 TFDP3Q5H9I0 405 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 C19orf48Q6RUI8 117 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 ZNF765Q7L2R6 523 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 KDELC2Q7Z4H8 507 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 DAAM2Q86T65 1068 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 NT5DC3Q86UY8 548 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 RCOR2Q8IZ40 523 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 NRSN1Q8IZ57 195 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 GPBAR1Q8TDU6 330 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 CCDC74AQ96AQ1 378 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 EID2BQ96D98 161 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 WDR24Q96S15 920 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 MLPHQ9BV36 600 aaPredicted RBP17.64■□□□□ 0.41
LSM5-204ENST00000409909 SLC25A51Q9H1U9 297 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 DNPEPQ9ULA0 475 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 SUFUQ9UMX1 484 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 SLC17A4Q9Y2C5 497 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 TMEM98Q9Y2Y6 226 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 ST14Q9Y5Y6 855 aa17.64■□□□□ 0.41
LSM5-204ENST00000409909 ADAMTS20P59510 1910 aa17.63■□□□□ 0.41
LSM5-204ENST00000409909 C1orf232A0A0U1RR37 186 aa17.63■□□□□ 0.41
LSM5-204ENST00000409909 A0A1W2PNU3 283 aaPredicted RBP17.63■□□□□ 0.41
LSM5-204ENST00000409909 NOBOXO60393 691 aa17.63■□□□□ 0.41
LSM5-204ENST00000409909 PTPN3P26045 913 aa17.63■□□□□ 0.41
LSM5-204ENST00000409909 GNPDA1P46926 289 aa17.63■□□□□ 0.41
LSM5-204ENST00000409909 TEX44Q53QW1 395 aa17.63■□□□□ 0.41
LSM5-204ENST00000409909 TRIM74Q86UV6 250 aa17.63■□□□□ 0.41
LSM5-204ENST00000409909 EXD1Q8NHP7 514 aa17.63■□□□□ 0.41
LSM5-204ENST00000409909 SPATA22Q8NHS9 363 aa17.63■□□□□ 0.41
LSM5-204ENST00000409909 SCARF2Q96GP6 870 aaPredicted RBP17.63■□□□□ 0.41
LSM5-204ENST00000409909 TEKT5Q96M29 485 aa17.63■□□□□ 0.41
LSM5-204ENST00000409909 ADGRE3Q9BY15 652 aa17.63■□□□□ 0.41
LSM5-204ENST00000409909 LACRTQ9GZZ8 138 aa17.63■□□□□ 0.41
LSM5-204ENST00000409909 GLOD4Q9HC38 313 aa17.63■□□□□ 0.41
LSM5-204ENST00000409909 LUC7LQ9NQ29 371 aaKnown RBP17.63■□□□□ 0.41
LSM5-204ENST00000409909 SPATS2LQ9NUQ6 558 aaKnown RBP17.63■□□□□ 0.41
LSM5-204ENST00000409909 KIF26BQ2KJY2 2108 aa17.62■□□□□ 0.41
LSM5-204ENST00000409909 NTN3O00634 580 aaPredicted RBP17.62■□□□□ 0.41
LSM5-204ENST00000409909 MT-CYBP00156 380 aaPredicted RBP17.62■□□□□ 0.41
LSM5-204ENST00000409909 MPOP05164 745 aa17.62■□□□□ 0.41
LSM5-204ENST00000409909 CD68P34810 354 aaPredicted RBP17.62■□□□□ 0.41
LSM5-204ENST00000409909 SPINT3P49223 89 aa17.62■□□□□ 0.41
LSM5-204ENST00000409909 PDX1P52945 283 aa17.62■□□□□ 0.41
LSM5-204ENST00000409909 WASHC5Q12768 1159 aa17.62■□□□□ 0.41
LSM5-204ENST00000409909 DOK6Q6PKX4 331 aa17.62■□□□□ 0.41
LSM5-204ENST00000409909 RBM44Q6ZP01 1051 aaKnown RBP17.62■□□□□ 0.41
LSM5-204ENST00000409909 BZW1Q7L1Q6 419 aaKnown RBP17.62■□□□□ 0.41
LSM5-204ENST00000409909 RAVER1Q8IY67 606 aaKnown RBP17.62■□□□□ 0.41
LSM5-204ENST00000409909 ACRBPQ8NEB7 543 aa17.62■□□□□ 0.41
LSM5-204ENST00000409909 TFB1MQ8WVM0 346 aaKnown RBP17.62■□□□□ 0.41
LSM5-204ENST00000409909 HNRNPLLQ8WVV9 542 aaKnown RBP17.62■□□□□ 0.41
LSM5-204ENST00000409909 ATXN7L3BQ96GX2 97 aa17.62■□□□□ 0.41
LSM5-204ENST00000409909 COX14Q96I36 57 aa17.62■□□□□ 0.41
LSM5-204ENST00000409909 HIC2Q96JB3 615 aa17.62■□□□□ 0.41
LSM5-204ENST00000409909 HEMGNQ9BXL5 484 aa17.62■□□□□ 0.41
LSM5-204ENST00000409909 DPEP2Q9H4A9 486 aa17.62■□□□□ 0.41
LSM5-204ENST00000409909 TRNAU1APQ9NX07 287 aaKnown RBP17.62■□□□□ 0.41
LSM5-204ENST00000409909 CNOT6Q9ULM6 557 aaKnown RBP17.62■□□□□ 0.41
LSM5-204ENST00000409909 PLEKHM1Q9Y4G2 1056 aa17.62■□□□□ 0.41
LSM5-204ENST00000409909 ENTPD2Q9Y5L3 495 aa17.62■□□□□ 0.41
LSM5-204ENST00000409909 IGSF10Q6WRI0 2623 aa17.62■□□□□ 0.41
LSM5-204ENST00000409909 BPTFQ12830 3046 aa17.61■□□□□ 0.41
LSM5-204ENST00000409909 A0A087WV48 116 aa17.61■□□□□ 0.41
LSM5-204ENST00000409909 B4DGG1 531 aa17.61■□□□□ 0.41
LSM5-204ENST00000409909 INPP4BO15327 924 aa17.61■□□□□ 0.41
LSM5-204ENST00000409909 TCEA3O75764 348 aa17.61■□□□□ 0.41
LSM5-204ENST00000409909 FGF1P05230 155 aa17.61■□□□□ 0.41
LSM5-204ENST00000409909 IVLP07476 585 aa17.61■□□□□ 0.41
LSM5-204ENST00000409909 PIRTP0C851 137 aa17.61■□□□□ 0.41
LSM5-204ENST00000409909 AK4P27144 223 aaPredicted RBP17.61■□□□□ 0.41
LSM5-204ENST00000409909 ADCY8P40145 1251 aa17.61■□□□□ 0.41
LSM5-204ENST00000409909 CCL7P80098 99 aa17.61■□□□□ 0.41
LSM5-204ENST00000409909 CTBSQ01459 385 aa17.61■□□□□ 0.41
LSM5-204ENST00000409909 CDK18Q07002 472 aa17.61■□□□□ 0.41
LSM5-204ENST00000409909 HLTFQ14527 1009 aaKnown RBP eCLIP17.61■□□□□ 0.41
LSM5-204ENST00000409909 PCSK7Q16549 785 aa17.61■□□□□ 0.41
LSM5-204ENST00000409909 CERCAMQ5T4B2 595 aa17.61■□□□□ 0.41
LSM5-204ENST00000409909 LYSMD3Q7Z3D4 306 aa17.61■□□□□ 0.41
LSM5-204ENST00000409909 ZC3H18Q86VM9 953 aaKnown RBP17.61■□□□□ 0.41
LSM5-204ENST00000409909 TMEM139Q8IV31 216 aa17.61■□□□□ 0.41
LSM5-204ENST00000409909 CCDC50Q8IVM0 306 aa17.61■□□□□ 0.41
LSM5-204ENST00000409909 P3H4Q92791 437 aa17.61■□□□□ 0.41
LSM5-204ENST00000409909 HAUS1Q96CS2 278 aa17.61■□□□□ 0.41
LSM5-204ENST00000409909 HERPUD2Q9BSE4 406 aa17.61■□□□□ 0.41
LSM5-204ENST00000409909 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.61■□□□□ 0.41
LSM5-204ENST00000409909 RNF215Q9Y6U7 377 aa17.61■□□□□ 0.41
LSM5-204ENST00000409909 UNC13CQ8NB66 2214 aa17.61■□□□□ 0.41
LSM5-204ENST00000409909 A0A1W2PQM1 296 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms