RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 RACK1P63244 317 aaKnown RBP20.55■□□□□ 0.88
C4orf48-202ENST00000409860 TMPRSS15P98073 1019 aa20.55■□□□□ 0.88
C4orf48-202ENST00000409860 DPTQ07507 201 aa20.55■□□□□ 0.88
C4orf48-202ENST00000409860 PTPRCAPQ14761 206 aa20.55■□□□□ 0.88
C4orf48-202ENST00000409860 RAET1GQ6H3X3 334 aa20.55■□□□□ 0.88
C4orf48-202ENST00000409860 ESRP1Q6NXG1 681 aaKnown RBP20.55■□□□□ 0.88
C4orf48-202ENST00000409860 TMEM145Q8NBT3 493 aa20.55■□□□□ 0.88
C4orf48-202ENST00000409860 GPR26Q8NDV2 337 aa20.55■□□□□ 0.88
C4orf48-202ENST00000409860 UBXN4Q92575 508 aa20.55■□□□□ 0.88
C4orf48-202ENST00000409860 SCAMP4Q969E2 229 aa20.55■□□□□ 0.88
C4orf48-202ENST00000409860 LRRC39Q96DD0 335 aa20.55■□□□□ 0.88
C4orf48-202ENST00000409860 SIGLEC10Q96LC7 697 aa20.55■□□□□ 0.88
C4orf48-202ENST00000409860 SLC6A18Q96N87 628 aa20.55■□□□□ 0.88
C4orf48-202ENST00000409860 RIOK2Q9BVS4 552 aaKnown RBP20.55■□□□□ 0.88
C4orf48-202ENST00000409860 SEMA4AQ9H3S1 761 aa20.55■□□□□ 0.88
C4orf48-202ENST00000409860 MBNL1Q9NR56 388 aaKnown RBP20.55■□□□□ 0.88
C4orf48-202ENST00000409860 CHRAC1Q9NRG0 131 aa20.55■□□□□ 0.88
C4orf48-202ENST00000409860 FKBPLQ9UIM3 349 aa20.55■□□□□ 0.88
C4orf48-202ENST00000409860 HS3ST3A1Q9Y663 406 aa20.55■□□□□ 0.88
C4orf48-202ENST00000409860 TRPM6Q9BX84 2022 aa20.54■□□□□ 0.88
C4orf48-202ENST00000409860 ABCA7Q8IZY2 2146 aa20.54■□□□□ 0.88
C4orf48-202ENST00000409860 GLYATL1P3A0A0U1RQE8 302 aa20.54■□□□□ 0.88
C4orf48-202ENST00000409860 EIF3HO15372 352 aaKnown RBP eCLIP20.54■□□□□ 0.88
C4orf48-202ENST00000409860 TSHRP16473 764 aa20.54■□□□□ 0.88
C4orf48-202ENST00000409860 IGFALSP35858 605 aa20.54■□□□□ 0.88
C4orf48-202ENST00000409860 GPR1P46091 355 aa20.54■□□□□ 0.88
C4orf48-202ENST00000409860 PDIA2Q13087 525 aaKnown RBP20.54■□□□□ 0.88
C4orf48-202ENST00000409860 MSS51Q4VC12 460 aa20.54■□□□□ 0.88
C4orf48-202ENST00000409860 HENMT1Q5T8I9 393 aaKnown RBP20.54■□□□□ 0.88
C4orf48-202ENST00000409860 CEP128Q6ZU80 1094 aa20.54■□□□□ 0.88
C4orf48-202ENST00000409860 SYT12Q8IV01 421 aa20.54■□□□□ 0.88
C4orf48-202ENST00000409860 TRAM1L1Q8N609 369 aa20.54■□□□□ 0.88
C4orf48-202ENST00000409860 FAM174AQ8TBP5 190 aa20.54■□□□□ 0.88
C4orf48-202ENST00000409860 RUBCNQ92622 972 aa20.54■□□□□ 0.88
C4orf48-202ENST00000409860 PIGKQ92643 395 aa20.54■□□□□ 0.88
C4orf48-202ENST00000409860 NAT9Q9BTE0 207 aa20.54■□□□□ 0.88
C4orf48-202ENST00000409860 ZSCAN5AQ9BUG6 496 aa20.54■□□□□ 0.88
C4orf48-202ENST00000409860 SPATA16Q9BXB7 569 aa20.54■□□□□ 0.88
C4orf48-202ENST00000409860 PHACTR1Q9C0D0 580 aa20.54■□□□□ 0.88
C4orf48-202ENST00000409860 IL26Q9NPH9 171 aa20.54■□□□□ 0.88
C4orf48-202ENST00000409860 ZDHHC18Q9NUE0 388 aa20.54■□□□□ 0.88
C4orf48-202ENST00000409860 APPL1Q9UKG1 709 aa20.54■□□□□ 0.88
C4orf48-202ENST00000409860 ATXN2Q99700 1313 aaKnown RBP20.53■□□□□ 0.88
C4orf48-202ENST00000409860 FAM237BA0A1B0GVD1 139 aa20.53■□□□□ 0.88
C4orf48-202ENST00000409860 A6NNZ2 444 aa20.53■□□□□ 0.88
C4orf48-202ENST00000409860 PRR5-ARHGAP8B1AHC4 643 aa20.53■□□□□ 0.88
C4orf48-202ENST00000409860 E7ESA3 106 aa20.53■□□□□ 0.88
C4orf48-202ENST00000409860 BCAT2O15382 392 aaPredicted RBP20.53■□□□□ 0.88
C4orf48-202ENST00000409860 BANF1O75531 89 aa20.53■□□□□ 0.88
C4orf48-202ENST00000409860 PGAM1P18669 254 aa20.53■□□□□ 0.88
C4orf48-202ENST00000409860 PSMA3P25788 255 aa20.53■□□□□ 0.88
C4orf48-202ENST00000409860 TEAD1P28347 426 aa20.53■□□□□ 0.88
C4orf48-202ENST00000409860 HOXD12P35452 270 aa20.53■□□□□ 0.88
C4orf48-202ENST00000409860 CARSP49589 748 aaKnown RBP20.53■□□□□ 0.88
C4orf48-202ENST00000409860 CLDN2P57739 230 aa20.53■□□□□ 0.88
C4orf48-202ENST00000409860 LAIR1Q6GTX8 287 aa20.53■□□□□ 0.88
C4orf48-202ENST00000409860 PNCKQ6P2M8 343 aa20.53■□□□□ 0.88
C4orf48-202ENST00000409860 FAM151BQ6UXP7 276 aa20.53■□□□□ 0.88
C4orf48-202ENST00000409860 KYAT3Q6YP21 454 aaKnown RBP20.53■□□□□ 0.88
C4orf48-202ENST00000409860 GCNT7Q6ZNI0 430 aa20.53■□□□□ 0.88
C4orf48-202ENST00000409860 RABEPKQ7Z6M1 372 aa20.53■□□□□ 0.88
C4orf48-202ENST00000409860 CCNJLQ8IV13 435 aa20.53■□□□□ 0.88
C4orf48-202ENST00000409860 AGGF1Q8N302 714 aaeCLIP20.53■□□□□ 0.88
C4orf48-202ENST00000409860 OR13J1Q8NGT2 312 aa20.53■□□□□ 0.88
C4orf48-202ENST00000409860 DTX3LQ8TDB6 740 aa20.53■□□□□ 0.88
C4orf48-202ENST00000409860 EBNA1BP2Q99848 306 aaKnown RBP20.53■□□□□ 0.88
C4orf48-202ENST00000409860 TM9SF3Q9HD45 589 aa20.53■□□□□ 0.88
C4orf48-202ENST00000409860 FAM86C1Q9NVL1 165 aa20.53■□□□□ 0.88
C4orf48-202ENST00000409860 SLC2A6Q9UGQ3 507 aa20.53■□□□□ 0.88
C4orf48-202ENST00000409860 PILRBQ9UKJ0 227 aa20.53■□□□□ 0.88
C4orf48-202ENST00000409860 CA5BQ9Y2D0 317 aa20.53■□□□□ 0.88
C4orf48-202ENST00000409860 A0A1B0GTW7 788 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 H7C0S8 307 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 TOR1BO14657 336 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 EPN2O95208 641 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 PRAMEF1O95521 474 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 PAMP19021 973 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 NMBRP28336 390 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 NBL1P41271 181 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 ELK3P41970 407 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 PRAMEP78395 509 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 ACVR1Q04771 509 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 CBLBQ13191 982 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 ITGA9Q13797 1035 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 INPP5AQ14642 412 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 TEAD4Q15561 434 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 PDPK2PQ6A1A2 396 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 PTAR1Q7Z6K3 402 aaPredicted RBP20.52■□□□□ 0.88
C4orf48-202ENST00000409860 ABI3BPQ7Z7G0 1075 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 CCDC25Q86WR0 208 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 PLA2G15Q8NCC3 412 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 C1orf216Q8TAB5 229 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 SKA1Q96BD8 255 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 ZNF669Q96BR6 464 aaPredicted RBP20.52■□□□□ 0.88
C4orf48-202ENST00000409860 CDKN2AIPNLQ96HQ2 116 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 ZNF778Q96MU6 729 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 FMO2Q99518 471 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 TSPYL1Q9H0U9 437 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 WDR26Q9H7D7 661 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 SAYSD1Q9NPB0 183 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms