RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 PCBP4P57723 403 aaKnown RBP14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 GABREP78334 506 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 DSC2Q02487 901 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 LRP8Q14114 963 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 DSG2Q14126 1118 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 COL28A1Q2UY09 1125 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 C14orf28Q4W4Y0 310 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 PERM1Q5SV97 790 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 CERCAMQ5T4B2 595 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 RAET1GQ6H3X3 334 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 CCDC70Q6NSX1 233 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 NT5DC3Q86UY8 548 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 RCOR2Q8IZ40 523 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 HIC2Q96JB3 615 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 TMEM74Q96NL1 305 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 GFM1Q96RP9 751 aaKnown RBP14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 LGMNQ99538 433 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 ABCG8Q9H221 673 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 DPEP2Q9H4A9 486 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 CAAP1Q9H8G2 361 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 CARS2Q9HA77 564 aaKnown RBP14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 MOSPD1Q9UJG1 213 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 CHKBQ9Y259 395 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 TTLL3Q9Y4R7 772 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 PCDHB1Q9Y5F3 818 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 ENTPD2Q9Y5L3 495 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 ITPR1Q14643 2758 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 NBEAQ8NFP9 2946 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 ZRANB2O95218 330 aaKnown RBP eCLIP14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 HLA-DQB2P05538 268 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 CELA2BP08218 269 aaPredicted RBP14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 CTPS1P17812 591 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 COMTP21964 271 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 NOP2P46087 812 aaKnown RBP14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 STC1P52823 247 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 NIPAL4Q0D2K0 466 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 AP1B1Q10567 949 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 HLTFQ14527 1009 aaKnown RBP eCLIP14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 TAZQ16635 292 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 TEX44Q53QW1 395 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 C19orf48Q6RUI8 117 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 TSPAN33Q86UF1 283 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 PDZD3Q86UT5 571 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 C17orf82Q86X59 251 aaPredicted RBP14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 CPNE8Q86YQ8 564 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 TC2NQ8N9U0 490 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 KYQ8NBH2 561 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 LIN37Q96GY3 246 aaPredicted RBP14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 MRFAP1L1Q96HT8 127 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 OLFM3Q96PB7 478 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 PANX2Q96RD6 677 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 VAT1Q99536 393 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 SLC25A51Q9H1U9 297 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 LRRN3Q9H3W5 708 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 RMI1Q9H9A7 625 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 MAGEE1Q9HCI5 957 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 MRPL40Q9NQ50 206 aaKnown RBP14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 PKD2L2Q9NZM6 624 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 SIRPGQ9P1W8 387 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 VPS18Q9P253 973 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 LRIT1Q9P2V4 623 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 ALG6Q9Y672 507 aa14.48□□□□□ -0.09
NIF3L1-205ENST00000409588 ADAMTS20P59510 1910 aa14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 CCDC187A0A096LP49 1063 aa14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 GOLGA6CA6NDK9 693 aa14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 GOLGA6BA6NDN3 693 aa14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 KCNK1O00180 336 aa14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 TLX3O43711 291 aaPredicted RBP14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 NOBOXO60393 691 aa14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 IPO7O95373 1038 aaKnown RBP14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 KRT1P04264 644 aa14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 MPOP05164 745 aa14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 GOLGA6DP0CG33 693 aa14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 CCKBRP32239 447 aa14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 CD86P42081 329 aa14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 GPR3P46089 330 aa14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 RFX6Q8HWS3 928 aa14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 TMTC1Q8IUR5 882 aa14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 CNTD1Q8N815 330 aa14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 LSM14AQ8ND56 463 aaKnown RBP14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 CCDC74AQ96AQ1 378 aa14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 IMP4Q96G21 291 aaKnown RBP14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 ATXN7L3BQ96GX2 97 aa14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 COX14Q96I36 57 aa14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 FAM83DQ9H4H8 585 aa14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 GOLGA6AQ9NYA3 693 aa14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 SUFUQ9UMX1 484 aa14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 PCDHA13Q9Y5I0 950 aa14.47□□□□□ -0.09
NIF3L1-205ENST00000409588 ASXL3Q9C0F0 2248 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 C1orf232A0A0U1RR37 186 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 GPR89AB7ZAQ6 455 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 MAP3K6O95382 1288 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 CLDN7O95471 211 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 EPOP01588 193 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 FGF1P05230 155 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 MMP2P08253 660 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 GPR89BP0CG08 455 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 ADCY8P40145 1251 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 CDKN2BP42772 138 aa14.46□□□□□ -0.09
NIF3L1-205ENST00000409588 SPINT3P49223 89 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms