RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 ATP6V1E2Q96A05 226 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 LRRC59Q96AG4 307 aaKnown RBP4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 TMCO6Q96DC7 493 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 METTL2AQ96IZ6 378 aaKnown RBP4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 DGAT2Q96PD7 388 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 RAB3IPQ96QF0 476 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 SIGLEC11Q96RL6 698 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 SRSF8Q9BRL6 282 aaKnown RBP4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 PCGF1Q9BSM1 259 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 TKTL2Q9H0I9 626 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 RSPH9Q9H1X1 276 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 KLHL31Q9H511 634 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 PFDN4Q9NQP4 134 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 CYSLTR2Q9NS75 346 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 AMACRQ9UHK6 382 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 R3HDM2Q9Y2K5 976 aaKnown RBP4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 HS3ST3A1Q9Y663 406 aa4.84□□□□□ -1.63
HMGB3P18-201ENST00000406327 ITSN2Q9NZM3 1697 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 SHROOM2Q13796 1616 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 ARHGEF5Q12774 1597 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 ABCC2Q92887 1545 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 CCDC141Q6ZP82 1450 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 CCDC7Q96M83 1385 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 KANSL1LA0AUZ9 987 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 STMND1H3BQB6 276 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 PPP6CO00743 305 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 CLGNO14967 610 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 PAPSS1O43252 624 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 TLX3O43711 291 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 TBX10O75333 385 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 CLDN7O95471 211 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 CCDC175P0C221 793 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 VDRP11473 427 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 CLCN3P51790 818 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 DPTQ07507 201 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 SNTB1Q13884 538 aaKnown RBP4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 CDONQ4KMG0 1287 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 DAB2IPQ5VWQ8 1189 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 GGNBP1Q5YKI7 109 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 TSPAN33Q86UF1 283 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 NOXA1Q86UR1 476 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 ANKRD13BQ86YJ7 626 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 THNSL1Q8IYQ7 743 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 TEX45Q8NA69 505 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 TDRD5Q8NAT2 981 aaKnown RBP4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 KDM1BQ8NB78 822 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 AGBL3Q8NEM8 1001 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 OR14L1PQ8NHC6 308 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 TRPC4APQ8TEL6 797 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 EME1Q96AY2 570 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 RMDN1Q96DB5 314 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 GFM1Q96RP9 751 aaKnown RBP4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 PAFAH2Q99487 392 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 SH3GL2Q99962 352 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 DENND2DQ9H6A0 471 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 ARGLU1Q9NWB6 273 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 WSB2Q9NYS7 404 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 CISD1Q9NZ45 108 aaKnown RBP4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 ANAPC2Q9UJX6 822 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 NFE2L3Q9Y4A8 694 aa4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 SRPRBQ9Y5M8 271 aaKnown RBP4.83□□□□□ -1.64
HMGB3P18-201ENST00000406327 ERCC6L2Q5T890 1561 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 PLEKHH2Q8IVE3 1493 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 UHRF1BP1Q6BDS2 1440 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 KIF7Q2M1P5 1343 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 TRBC2A0A5B9 178 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 IFNL4K9M1U5 179 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 MDM4O15151 490 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 IPO8O15397 1037 aaKnown RBP4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 C1QL1O75973 258 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 RGS11O94810 467 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 TUBBP07437 444 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 TRIM21P19474 475 aaKnown RBP4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 ANXA7P20073 488 aaKnown RBP4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 UBA1P22314 1058 aaKnown RBP4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 ATP5F1P24539 256 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 CXCR3P49682 368 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 GPR143P51810 404 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 ZNF41P51814 821 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 NHLH1Q02575 133 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 ZNF91Q05481 1191 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 TFCP2Q12800 502 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 GRAPQ13588 217 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 ALCAMQ13740 583 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 SCARB2Q14108 478 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 COG2Q14746 738 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 CRY2Q49AN0 593 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 PAPD7Q5XG87 772 aaKnown RBP4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 SIGIRRQ6IA17 410 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 PQLC2Q6ZP29 291 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 ZNF788Q6ZQV5 615 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 DPPA4Q7L190 304 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 TRAPPC11Q7Z392 1133 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 GALNTL5Q7Z4T8 443 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 HJURPQ8NCD3 748 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 SLC16A11Q8NCK7 471 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 TSPAN14Q8NG11 270 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 CEP295NLQ96MC4 621 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 CFAP57Q96MR6 1250 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 AGAP2Q99490 1192 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms