RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 RPS6KL1Q9Y6S9 549 aa11.85□□□□□ -0.51
SPTLC1P3-201ENST00000403408 SPTBP11277 2137 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 CCDC168Q8NDH2 2452 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 SEC16AO15027 2179 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 CCP110O43303 1012 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 GADD45BO75293 160 aaPredicted RBP11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 HEXIM1O94992 359 aaKnown RBP11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 SERPINA4P29622 427 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 DCTP40126 519 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 FASLGP48023 281 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 GPLD1P80108 840 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 ERV3-1Q14264 604 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 CA9Q16790 459 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 FHL5Q5TD97 284 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 DOK6Q6PKX4 331 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 CEACAM20Q6UY09 585 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 Q6ZVL8 140 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 SLFN11Q7Z7L1 901 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 TSPAN33Q86UF1 283 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 CCDC13Q8IYE1 715 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 SFRP1Q8N474 314 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 KIAA1143Q96AT1 154 aaPredicted RBP11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 DTD2Q96FN9 168 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 RUFY1Q96T51 708 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 AGAP2Q99490 1192 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 PRDM8Q9NQV8 689 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 PHPT1Q9NRX4 125 aaPredicted RBP11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 GPATCH2LQ9NWQ4 482 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 RWDD2AQ9UIY3 292 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 CROTQ9UKG9 612 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 KCTD3Q9Y597 815 aa11.84□□□□□ -0.51
SPTLC1P3-201ENST00000403408 ENO4A6NNW6 628 aa11.83□□□□□ -0.52
SPTLC1P3-201ENST00000403408 F8VZ95 297 aa11.83□□□□□ -0.52
SPTLC1P3-201ENST00000403408 HTRA2O43464 458 aaPredicted RBP11.83□□□□□ -0.52
SPTLC1P3-201ENST00000403408 OGDHQ02218 1023 aa11.83□□□□□ -0.52
SPTLC1P3-201ENST00000403408 BCL2L1Q07817 233 aa11.83□□□□□ -0.52
SPTLC1P3-201ENST00000403408 GRM3Q14832 879 aa11.83□□□□□ -0.52
SPTLC1P3-201ENST00000403408 NADK2Q4G0N4 442 aa11.83□□□□□ -0.52
SPTLC1P3-201ENST00000403408 PYCR3Q53H96 274 aa11.83□□□□□ -0.52
SPTLC1P3-201ENST00000403408 CFAP58Q5T655 872 aa11.83□□□□□ -0.52
SPTLC1P3-201ENST00000403408 DENND2CQ68D51 928 aa11.83□□□□□ -0.52
SPTLC1P3-201ENST00000403408 WDR74Q6RFH5 385 aaPredicted RBP11.83□□□□□ -0.52
SPTLC1P3-201ENST00000403408 KDELC2Q7Z4H8 507 aa11.83□□□□□ -0.52
SPTLC1P3-201ENST00000403408 TECPR1Q7Z6L1 1165 aa11.83□□□□□ -0.52
SPTLC1P3-201ENST00000403408 PGBD5Q8N414 524 aa11.83□□□□□ -0.52
SPTLC1P3-201ENST00000403408 NPWQ8N729 165 aa11.83□□□□□ -0.52
SPTLC1P3-201ENST00000403408 CPT1CQ8TCG5 803 aa11.83□□□□□ -0.52
SPTLC1P3-201ENST00000403408 NCSTNQ92542 709 aa11.83□□□□□ -0.52
SPTLC1P3-201ENST00000403408 DPYSL5Q9BPU6 564 aa11.83□□□□□ -0.52
SPTLC1P3-201ENST00000403408 OGFRQ9NZT2 677 aa11.83□□□□□ -0.52
SPTLC1P3-201ENST00000403408 KLHL3Q9UH77 587 aa11.83□□□□□ -0.52
SPTLC1P3-201ENST00000403408 MAP4K5Q9Y4K4 846 aa11.83□□□□□ -0.52
SPTLC1P3-201ENST00000403408 PCDHGC4Q9Y5F7 938 aa11.83□□□□□ -0.52
SPTLC1P3-201ENST00000403408 ATP6V1DQ9Y5K8 247 aa11.83□□□□□ -0.52
SPTLC1P3-201ENST00000403408 MDC1Q14676 2089 aaKnown RBP11.83□□□□□ -0.52
SPTLC1P3-201ENST00000403408 A6NCN8 305 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 NPIPB15A6NHN6 443 aaPredicted RBP11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 MKRN2OSH3BPM6 223 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 PDE2AO00408 941 aaPredicted RBP11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 SORBS2O94875 1100 aaKnown RBP11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 PEX11BO96011 259 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 UNGP13051 313 aaPredicted RBP11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 UCHL3P15374 230 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 GPD1P21695 349 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 VIPR1P32241 457 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 DLSTP36957 453 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 MTIF2P46199 727 aaKnown RBP11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 KLK7P49862 253 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 SCNN1BP51168 640 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 GFERP55789 205 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 RPL7AP62424 266 aaKnown RBP11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 SH3BP2P78314 561 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 MC1RQ01726 317 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 MRPL49Q13405 166 aaKnown RBP11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 NFATC2Q13469 925 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 SEPT6Q14141 434 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 IHHQ14623 411 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 HSP90AA4PQ58FG1 418 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 SCYL2Q6P3W7 929 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 MARK2Q7KZI7 788 aaKnown RBP11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 GALNT6Q8NCL4 622 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 SPOCK2Q92563 424 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 TCTN2Q96GX1 697 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 OR2M4Q96R27 311 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 SLC38A3Q99624 504 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 EFHD1Q9BUP0 239 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 TBC1D10AQ9BXI6 508 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 GANQ9H2C0 597 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 NDST4Q9H3R1 872 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 AKIRIN1Q9H9L7 192 aaPredicted RBP11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 TBC1D29Q9UFV1 150 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 CD84Q9UIB8 345 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 HOOK1Q9UJC3 728 aaKnown RBP11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 PRKAB1Q9Y478 270 aa11.82□□□□□ -0.52
SPTLC1P3-201ENST00000403408 CDC14CA4D256 554 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 GOLGA6L4A6NEF3 574 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 TTLL8A6PVC2 850 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 POLR1CO15160 346 aaPredicted RBP11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 EPHB6O15197 1021 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 VPS4BO75351 444 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms