RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 ARSDP51689 593 aa15.89■□□□□ 0.13
HMGA1-204ENST00000401473 TMPRSS15P98073 1019 aa15.89■□□□□ 0.13
HMGA1-204ENST00000401473 HENMT1Q5T8I9 393 aaKnown RBP15.89■□□□□ 0.13
HMGA1-204ENST00000401473 LYSMD4Q5XG99 296 aa15.89■□□□□ 0.13
HMGA1-204ENST00000401473 ESRP1Q6NXG1 681 aaKnown RBP15.89■□□□□ 0.13
HMGA1-204ENST00000401473 OR13J1Q8NGT2 312 aa15.89■□□□□ 0.13
HMGA1-204ENST00000401473 IFT81Q8WYA0 676 aa15.89■□□□□ 0.13
HMGA1-204ENST00000401473 NUS1Q96E22 293 aa15.89■□□□□ 0.13
HMGA1-204ENST00000401473 MFSD3Q96ES6 412 aa15.89■□□□□ 0.13
HMGA1-204ENST00000401473 DNAJC1Q96KC8 554 aaKnown RBP15.89■□□□□ 0.13
HMGA1-204ENST00000401473 RIOK2Q9BVS4 552 aaKnown RBP15.89■□□□□ 0.13
HMGA1-204ENST00000401473 KIFC1Q9BW19 673 aa15.89■□□□□ 0.13
HMGA1-204ENST00000401473 MIR1-1HGQ9H1L0 117 aa15.89■□□□□ 0.13
HMGA1-204ENST00000401473 FAM83DQ9H4H8 585 aa15.89■□□□□ 0.13
HMGA1-204ENST00000401473 SUDS3Q9H7L9 328 aaPredicted RBP15.89■□□□□ 0.13
HMGA1-204ENST00000401473 HEATR9A2RTY3 570 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 PRAMEF26H0Y7S4 382 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 STX7O15400 261 aaKnown RBP15.88■□□□□ 0.13
HMGA1-204ENST00000401473 SOD1P00441 154 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 PSMA3P25788 255 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 NMBRP28336 390 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 DPTQ07507 201 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 INPP5AQ14642 412 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 FASTKD3Q14CZ7 662 aaKnown RBP15.88■□□□□ 0.13
HMGA1-204ENST00000401473 IRF4Q15306 451 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 HIF1AQ16665 826 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 RAVER1Q8IY67 606 aaKnown RBP15.88■□□□□ 0.13
HMGA1-204ENST00000401473 NRSN1Q8IZ57 195 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 PDIK1LQ8N165 341 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 ZCCHC9Q8N567 271 aaKnown RBP15.88■□□□□ 0.13
HMGA1-204ENST00000401473 STYXQ8WUJ0 223 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 AP2M1Q96CW1 435 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 SLC6A18Q96N87 628 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 ANKZF1Q9H8Y5 726 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 PKD2L2Q9NZM6 624 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.88■□□□□ 0.13
HMGA1-204ENST00000401473 PILRBQ9UKJ0 227 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 DMTF1Q9Y222 760 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 FNDC3AQ9Y2H6 1198 aaKnown RBP15.88■□□□□ 0.13
HMGA1-204ENST00000401473 PKP3Q9Y446 797 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 V9GYY5 206 aaPredicted RBP15.88■□□□□ 0.13
HMGA1-204ENST00000401473 ATXN2Q99700 1313 aaKnown RBP15.88■□□□□ 0.13
HMGA1-204ENST00000401473 PIEZO1Q92508 2521 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 FAM186AA6NE01 2351 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 RGSL1A5PLK6 1076 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 PROB1E7EW31 1015 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 GPR39O43194 453 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 PPFIA2O75334 1257 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 CA5AP35218 305 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 IGFALSP35858 605 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 XIAPP98170 497 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 PDE1BQ01064 536 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 CBLBQ13191 982 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 BBS9Q3SYG4 887 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 TSTD2Q5T7W7 516 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 ALS2CLQ60I27 953 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 PNCKQ6P2M8 343 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 CASC4Q6P4E1 433 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 LAYNQ6UX15 382 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 GCNT7Q6ZNI0 430 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 CDKN2AIPNLQ96HQ2 116 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 TBATAQ96M53 351 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 FCRL3Q96P31 734 aaPredicted RBP15.88■□□□□ 0.13
HMGA1-204ENST00000401473 FRMD8Q9BZ67 464 aaPredicted RBP15.88■□□□□ 0.13
HMGA1-204ENST00000401473 PLAC1Q9HBJ0 212 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 TM9SF3Q9HD45 589 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 FAM114A2Q9NRY5 505 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 TREX1Q9NSU2 369 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 NLE1Q9NVX2 485 aaPredicted RBP15.88■□□□□ 0.13
HMGA1-204ENST00000401473 FKBPLQ9UIM3 349 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 SOX13Q9UN79 622 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 TEX264Q9Y6I9 313 aa15.88■□□□□ 0.13
HMGA1-204ENST00000401473 TDRD6O60522 2096 aaKnown RBP15.88■□□□□ 0.13
HMGA1-204ENST00000401473 E7ESA3 106 aa15.87■□□□□ 0.13
HMGA1-204ENST00000401473 LMNAP02545 664 aaKnown RBP15.87■□□□□ 0.13
HMGA1-204ENST00000401473 WNT1P04628 370 aa15.87■□□□□ 0.13
HMGA1-204ENST00000401473 TRIM23P36406 574 aa15.87■□□□□ 0.13
HMGA1-204ENST00000401473 CAV1Q03135 178 aa15.87■□□□□ 0.13
HMGA1-204ENST00000401473 PEX6Q13608 980 aa15.87■□□□□ 0.13
HMGA1-204ENST00000401473 WDR45BQ5MNZ6 344 aa15.87■□□□□ 0.13
HMGA1-204ENST00000401473 TMEM135Q86UB9 458 aa15.87■□□□□ 0.13
HMGA1-204ENST00000401473 NLRP8Q86W28 1048 aa15.87■□□□□ 0.13
HMGA1-204ENST00000401473 LGR4Q9BXB1 951 aa15.87■□□□□ 0.13
HMGA1-204ENST00000401473 SEMA4AQ9H3S1 761 aa15.87■□□□□ 0.13
HMGA1-204ENST00000401473 HS3ST3A1Q9Y663 406 aa15.87■□□□□ 0.13
HMGA1-204ENST00000401473 MAD1L1Q9Y6D9 718 aa15.87■□□□□ 0.13
HMGA1-204ENST00000401473 FADS2P1A8MWK0 482 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 UGT1A9O60656 530 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 PCCBP05166 539 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 UGT1A6P19224 532 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 UGT1A1P22309 533 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 UGT1A4P22310 534 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 AKT2P31751 481 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 UGT1A3P35503 534 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 UGT1A5P35504 534 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 NUDT1P36639 197 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 ELK3P41970 407 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 ARL4CP56559 192 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 DCDC1P59894 354 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 RACK1P63244 317 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms