RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 TWF1Q12792 350 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 BLMHQ13867 455 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 GSTA3Q16772 222 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 UNC50Q53HI1 259 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 IRGCQ6NXR0 463 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 HACD2Q6Y1H2 254 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 Q6ZNB5 142 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 KBTBD6Q86V97 674 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 CPXM2Q8N436 756 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 MDGA1Q8NFP4 955 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 NRG4Q8WWG1 115 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 DLG3Q92796 817 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 PTERQ96BW5 349 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 PHF21BQ96EK2 531 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 TTC1Q99614 292 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 C2orf49Q9BVC5 232 aaPredicted RBP17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 POLR3BQ9NW08 1133 aaPredicted RBP17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 OR51B4Q9Y5P0 310 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 C2orf78A6NCI8 922 aa17.66■□□□□ 0.42
HLA-DQB1-204ENST00000399084 CCL22O00626 93 aa17.66■□□□□ 0.42
HLA-DQB1-204ENST00000399084 KLK8O60259 260 aa17.66■□□□□ 0.42
HLA-DQB1-204ENST00000399084 FZD6O60353 706 aa17.66■□□□□ 0.42
HLA-DQB1-204ENST00000399084 PKMP14618 531 aaKnown RBP17.66■□□□□ 0.42
HLA-DQB1-204ENST00000399084 SESN3P58005 492 aa17.66■□□□□ 0.42
HLA-DQB1-204ENST00000399084 SEMA3AQ14563 771 aa17.66■□□□□ 0.42
HLA-DQB1-204ENST00000399084 LPCAT1Q8NF37 534 aa17.66■□□□□ 0.42
HLA-DQB1-204ENST00000399084 KCNJ9Q92806 393 aa17.66■□□□□ 0.42
HLA-DQB1-204ENST00000399084 PDLIM5Q96HC4 596 aaKnown RBP17.66■□□□□ 0.42
HLA-DQB1-204ENST00000399084 ZFRQ96KR1 1074 aaKnown RBP17.66■□□□□ 0.42
HLA-DQB1-204ENST00000399084 CATSPER2Q96P56 530 aa17.66■□□□□ 0.42
HLA-DQB1-204ENST00000399084 SLC25A23Q9BV35 468 aa17.66■□□□□ 0.42
HLA-DQB1-204ENST00000399084 OSBPL1AQ9BXW6 950 aa17.66■□□□□ 0.42
HLA-DQB1-204ENST00000399084 CRISPLD2Q9H0B8 497 aa17.66■□□□□ 0.42
HLA-DQB1-204ENST00000399084 RC3H2Q9HBD1 1191 aaKnown RBP17.66■□□□□ 0.42
HLA-DQB1-204ENST00000399084 TMEM45AQ9NWC5 275 aa17.66■□□□□ 0.42
HLA-DQB1-204ENST00000399084 PKP3Q9Y446 797 aa17.66■□□□□ 0.42
HLA-DQB1-204ENST00000399084 PCDHB1Q9Y5F3 818 aa17.66■□□□□ 0.42
HLA-DQB1-204ENST00000399084 PEX1O43933 1283 aa17.65■□□□□ 0.42
HLA-DQB1-204ENST00000399084 TBL1XO60907 577 aa17.65■□□□□ 0.42
HLA-DQB1-204ENST00000399084 GJB3O75712 270 aa17.65■□□□□ 0.42
HLA-DQB1-204ENST00000399084 CD160O95971 181 aa17.65■□□□□ 0.42
HLA-DQB1-204ENST00000399084 HDCP19113 662 aa17.65■□□□□ 0.42
HLA-DQB1-204ENST00000399084 HMGCLP35914 325 aa17.65■□□□□ 0.42
HLA-DQB1-204ENST00000399084 KCNC1P48547 511 aa17.65■□□□□ 0.42
HLA-DQB1-204ENST00000399084 PTPN5P54829 565 aa17.65■□□□□ 0.42
HLA-DQB1-204ENST00000399084 KLC1Q07866 573 aa17.65■□□□□ 0.42
HLA-DQB1-204ENST00000399084 GRIK2Q13002 908 aa17.65■□□□□ 0.42
HLA-DQB1-204ENST00000399084 PIGGQ5H8A4 983 aa17.65■□□□□ 0.42
HLA-DQB1-204ENST00000399084 LARP4Q71RC2 724 aaKnown RBP eCLIP17.65■□□□□ 0.42
HLA-DQB1-204ENST00000399084 DHDDSQ86SQ9 333 aa17.65■□□□□ 0.42
HLA-DQB1-204ENST00000399084 TTC30BQ8N4P2 665 aa17.65■□□□□ 0.42
HLA-DQB1-204ENST00000399084 SHCBP1LQ9BZQ2 653 aa17.65■□□□□ 0.42
HLA-DQB1-204ENST00000399084 C6orf203Q9P0P8 240 aaPredicted RBP17.65■□□□□ 0.42
HLA-DQB1-204ENST00000399084 LHX3Q9UBR4 397 aa17.65■□□□□ 0.42
HLA-DQB1-204ENST00000399084 ANKRD36A6QL64 1941 aa17.65■□□□□ 0.42
HLA-DQB1-204ENST00000399084 UBA6A0AVT1 1052 aaPredicted RBP17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 PSMD12O00232 456 aaPredicted RBP17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 TSPAN3O60637 253 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 SLC4A1P02730 911 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 MTHFD2P13995 350 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 ME2P23368 584 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 SGSHP51688 502 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 RHOAP61586 193 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 SLC7A9P82251 487 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 CACNG1Q06432 222 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 CCNIQ14094 377 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 PTK2BQ14289 1009 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 UGT3A2Q3SY77 523 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 LYPLAL1Q5VWZ2 237 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 ANKS6Q68DC2 871 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 HTR3DQ70Z44 454 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 TMEM150AQ86TG1 271 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 PIM3Q86V86 326 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 PTGR2Q8N8N7 351 aaPredicted RBP17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 RIN3Q8TB24 985 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 SLC26A7Q8TE54 656 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 TSPEARQ8WU66 669 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 MOCOSQ96EN8 888 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 NR1H4Q96RI1 486 aaPredicted RBP17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 MYCBPQ99417 103 aaPredicted RBP17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 UNKQ9C0B0 810 aaKnown RBP17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 WDR41Q9HAD4 459 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 ZDHHC7Q9NXF8 308 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 SARDHQ9UL12 918 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 PCDHGC4Q9Y5F7 938 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 BBIP1A8MTZ0 92 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 CASQ2O14958 399 aaPredicted RBP17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 BUD23O43709 281 aaKnown RBP17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 GREM1O60565 184 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 SOCS5O75159 536 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 MLYCDO95822 493 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 JUNP05412 331 aaKnown RBP17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 PDHA1P08559 390 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 PIRTP0C851 137 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 IRF1P10914 325 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 ATN1P54259 1190 aaPredicted RBP17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 IL2P60568 153 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 STX1BP61266 288 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 LCP2Q13094 533 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms