RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 ACOT12Q8WYK0 555 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 CHID1Q9BWS9 393 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 LMAN2LQ9H0V9 348 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 DSN1Q9H410 356 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 DNAJC11Q9NVH1 559 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 THUMPD1Q9NXG2 353 aaKnown RBP8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 GALNT8Q9NY28 637 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 FNIP2Q9P278 1114 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 DNAJB4Q9UDY4 337 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 FBXO5Q9UKT4 447 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 COQ6Q9Y2Z9 468 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 KPNA3O00505 521 aaPredicted RBP8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 ATG13O75143 517 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 AP2A1O95782 977 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 MT-CO1P00395 513 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 CHRNGP07510 517 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 VGLL4Q14135 290 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 AADACL2Q6P093 401 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 SPESP1Q6UW49 350 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 ALYREFQ86V81 257 aaKnown RBP8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 DENND1CQ8IV53 801 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 TMEM192Q8IY95 271 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 TRPV3Q8NET8 790 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 KCTD15Q96SI1 283 aaPredicted RBP8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 EHD1Q9H4M9 534 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 INTS10Q9NVR2 710 aaKnown RBP8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 CMTM6Q9NX76 183 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 PLK2Q9NYY3 685 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 SUCOQ9UBS9 1254 aaKnown RBP8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 CDH22Q9UJ99 828 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 BTN3A3O00478 584 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 SRPRAP08240 638 aaKnown RBP8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 SLC35G4P0C7Q5 338 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 SNHG28P0DPA3 235 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 VEGFAP15692 232 aaPredicted RBP8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 CDH4P55283 916 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 YBEYP58557 167 aaPredicted RBP8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 TAS2R40P59535 323 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 GMFBP60983 142 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 PRR23BQ6ZRT6 265 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 RAVER1Q8IY67 606 aaKnown RBP8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 OR2T12Q8NG77 320 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 FERD3LQ96RJ6 166 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 COPS8Q99627 209 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 SDCBP2Q9H190 292 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 PRDM12Q9H4Q4 367 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 CIDEBQ9UHD4 219 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 TLL2Q9Y6L7 1015 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 CACNB4O00305 520 aaPredicted RBP8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 OR10H3O60404 316 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 C4BPAP04003 597 aaKnown RBP8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 ASLP04424 464 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 SPAM1P38567 509 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 BNIP1Q12981 228 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 NDUFA9Q16795 377 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 TEX44Q53QW1 395 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 UBE2R2Q712K3 238 aaPredicted RBP8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 SMYD1Q8NB12 490 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 TRPV1Q8NER1 839 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 VMP1Q96GC9 406 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 CLPTM1LQ96KA5 538 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 GAD1Q99259 594 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 PDGFDQ9GZP0 370 aaPredicted RBP8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 CRISPLD1Q9H336 500 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 MTRRQ9UBK8 725 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 CKLFQ9UBR5 152 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 HMGXB4Q9UGU5 601 aa8.35□□□□□ -1.07
SPTLC3-201ENST00000399002 SYN3O14994 580 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 GSC2O15499 205 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 SLC28A2O43868 658 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 C8GP07360 202 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 FAM163BP0C2L3 166 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 LINC00032P0C843 101 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 LAG3P18627 525 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 TYSND1Q2T9J0 566 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 ABHD15Q6UXT9 468 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 DNAJC14Q6Y2X3 702 aaPredicted RBP8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 ARHGAP36Q6ZRI8 547 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 DEFB128Q7Z7B8 93 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 MPP5Q8N3R9 675 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 EFCAB3Q8N7B9 438 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 POC5Q8NA72 575 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 GLB1L3Q8NCI6 653 aaPredicted RBP8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 TRAPPC12Q8WVT3 735 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 PIH1D2Q8WWB5 315 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 ZNF347Q96SE7 839 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 PCDH12Q9NPG4 1184 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 NDOR1Q9UHB4 597 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 HEBP2Q9Y5Z4 205 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 AFDNP55196 1824 aaKnown RBP8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 NPEPPSL1A6NEC2 478 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 GJB6O95452 261 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 CDH3P22223 829 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 GNPDA1P46926 289 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 CXCR3P49682 368 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 LIMK2P53671 638 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 KCNJ2P63252 427 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 PFKPQ01813 784 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 RFTN1Q14699 578 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms