RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 ECT2LQ008S8 904 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 CLCQ05315 142 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 RAB39AQ14964 217 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 PGS1Q32NB8 556 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 TRIM60Q495X7 471 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 TSTD2Q5T7W7 516 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 KIAA0930Q6ICG6 404 aaPredicted RBP11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 RBM12BQ8IXT5 1001 aaKnown RBP11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 CENPSQ8N2Z9 138 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 TOP6BLQ8N6T0 577 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 BHMTQ93088 406 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 TAMM41Q96BW9 452 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 EXOC2Q96KP1 924 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 CPA4Q9UI42 421 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 PNMA8BQ9ULN7 279 aaPredicted RBP11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 NOBOXO60393 691 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 SEC22BO75396 215 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 SNAP29O95721 258 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 IMPDH1P20839 514 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 POLD2P49005 469 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 RGS4P49798 205 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 ST13P50502 369 aaKnown RBP11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 POLR2JP52435 117 aaKnown RBP11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 INHBEP58166 350 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 MTPNP58546 118 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 C1QTNF8P60827 252 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 ZNF846Q147U1 533 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 SYTL1Q8IYJ3 562 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 NPWQ8N729 165 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 LPCAT1Q8NF37 534 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 SEPT5Q99719 369 aaPredicted RBP11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 KIFC1Q9BW19 673 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 VTA1Q9NP79 307 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 IPPQ9Y573 584 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 NHSQ6T4R5 1651 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 MATN3O15232 486 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 ALOX15P16050 662 aaPredicted RBP11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 SCNN1AP37088 669 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 PIK3CGP48736 1102 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 DMPKQ09013 629 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 SIM2Q14190 667 aaPredicted RBP11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 MAPRE1Q15691 268 aaKnown RBP11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 MAPKAPK3Q16644 382 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 FGD3Q5JSP0 725 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 PRAMEF19Q5SWL8 479 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 PPP4R4Q6NUP7 873 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 DEFB132Q7Z7B7 95 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 OSTM1Q86WC4 334 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 NDEL1Q9GZM8 345 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 FAM124BQ9H5Z6 455 aaPredicted RBP11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 CD320Q9NPF0 282 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 ABCC13Q9NSE7 274 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 GMPR2Q9P2T1 348 aaKnown RBP11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 CLDN25C9JDP6 229 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 HLA-DQB2P05538 268 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 DARSP14868 501 aaKnown RBP11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 ALOX12P18054 663 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 CYP2C18P33260 490 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 RPL38P63173 70 aaKnown RBP11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 DDX39BQ13838 428 aaKnown RBP11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 RAP1GAP2Q684P5 730 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 GPRIN3Q6ZVF9 776 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 CYP4V2Q6ZWL3 525 aaPredicted RBP11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 GLT6D1Q7Z4J2 308 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 GALNT5Q7Z7M9 940 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 ZC3H7AQ8IWR0 971 aaKnown RBP11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 ADHFE1Q8IWW8 467 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 CAPSLQ8WWF8 208 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 NCSTNQ92542 709 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 HTRA1Q92743 480 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 GLT1D1Q96MS3 346 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 AGO3Q9H9G7 860 aaKnown RBP11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 ADGRE2Q9UHX3 823 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 TPRKBQ9Y3C4 175 aa11.09□□□□□ -0.63
CSGALNACT1-202ENST00000397998 CITO14578 2027 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 C17orf102A2RUQ5 167 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 AURKAO14965 403 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 DCLK1O15075 740 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CNOT3O75175 753 aaKnown RBP11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CYBBP04839 570 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 MSH3P20585 1137 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 BRCC3P46736 316 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 DEFA1P59665 94 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 DEFA3P59666 94 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 IL2P60568 153 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 POC5Q8NA72 575 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 OR2T12Q8NG77 320 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 NTAN1Q96AB6 310 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 MTFMTQ96DP5 389 aaKnown RBP11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 FCRL5Q96RD9 977 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 SH3GL1Q99961 368 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 PARVBQ9HBI1 364 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ACTR3BQ9P1U1 418 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 KLQ9UEF7 1012 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 NRCAMQ92823 1304 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 STRCP1A6NGW2 1772 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 IGKV6-21A0A0C4DH24 114 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 MFN2O95140 757 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 FTH1P02794 183 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 SMIM10L2AP0DMW4 78 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms