RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 BCL2L1Q07817 233 aa16.07■□□□□ 0.16
CUX2-202ENST00000397643 CDC20Q12834 499 aa16.07■□□□□ 0.16
CUX2-202ENST00000397643 TBX2Q13207 712 aaPredicted RBP16.07■□□□□ 0.16
CUX2-202ENST00000397643 ACOX1Q15067 660 aa16.07■□□□□ 0.16
CUX2-202ENST00000397643 ASIC2Q16515 512 aa16.07■□□□□ 0.16
CUX2-202ENST00000397643 TRIM72Q6ZMU5 477 aa16.07■□□□□ 0.16
CUX2-202ENST00000397643 ARHGAP36Q6ZRI8 547 aa16.07■□□□□ 0.16
CUX2-202ENST00000397643 MON1BQ7L1V2 547 aa16.07■□□□□ 0.16
CUX2-202ENST00000397643 PHF13Q86YI8 300 aaPredicted RBP16.07■□□□□ 0.16
CUX2-202ENST00000397643 CNGA4Q8IV77 575 aa16.07■□□□□ 0.16
CUX2-202ENST00000397643 CBARPQ8N350 705 aaPredicted RBP16.07■□□□□ 0.16
CUX2-202ENST00000397643 RTP4Q96DX8 246 aa16.07■□□□□ 0.16
CUX2-202ENST00000397643 SELENOOQ9BVL4 669 aa16.07■□□□□ 0.16
CUX2-202ENST00000397643 ASPSCR1Q9BZE9 553 aa16.07■□□□□ 0.16
CUX2-202ENST00000397643 PHPT1Q9NRX4 125 aaPredicted RBP16.07■□□□□ 0.16
CUX2-202ENST00000397643 IMPACTQ9P2X3 320 aa16.07■□□□□ 0.16
CUX2-202ENST00000397643 SLC17A4Q9Y2C5 497 aa16.07■□□□□ 0.16
CUX2-202ENST00000397643 LOC101059948A0A1B0GTJ6 334 aa16.06■□□□□ 0.16
CUX2-202ENST00000397643 CAPN5O15484 640 aaPredicted RBP16.06■□□□□ 0.16
CUX2-202ENST00000397643 ZW10O43264 779 aa16.06■□□□□ 0.16
CUX2-202ENST00000397643 PALMO75781 387 aa16.06■□□□□ 0.16
CUX2-202ENST00000397643 PRKAR1AP10644 381 aa16.06■□□□□ 0.16
CUX2-202ENST00000397643 LHCGRP22888 699 aa16.06■□□□□ 0.16
CUX2-202ENST00000397643 HTR7P34969 479 aa16.06■□□□□ 0.16
CUX2-202ENST00000397643 ADCY8P40145 1251 aa16.06■□□□□ 0.16
CUX2-202ENST00000397643 NSFP46459 744 aaKnown RBP16.06■□□□□ 0.16
CUX2-202ENST00000397643 POLD2P49005 469 aa16.06■□□□□ 0.16
CUX2-202ENST00000397643 RAB15P59190 212 aa16.06■□□□□ 0.16
CUX2-202ENST00000397643 TPI1P60174 286 aa16.06■□□□□ 0.16
CUX2-202ENST00000397643 RPL7AP62424 266 aaKnown RBP16.06■□□□□ 0.16
CUX2-202ENST00000397643 POLR2LP62875 67 aaKnown RBP16.06■□□□□ 0.16
CUX2-202ENST00000397643 NSUN2Q08J23 767 aaKnown RBP eCLIP16.06■□□□□ 0.162e-15■■■■■ 66.2
CUX2-202ENST00000397643 CLEC16AQ2KHT3 1053 aa16.06■□□□□ 0.16
CUX2-202ENST00000397643 PPP1R15BQ5SWA1 713 aa16.06■□□□□ 0.16
CUX2-202ENST00000397643 DCAF12Q5T6F0 453 aa16.06■□□□□ 0.16
CUX2-202ENST00000397643 TMEM71Q6P5X7 295 aa16.06■□□□□ 0.16
CUX2-202ENST00000397643 TIPARPQ7Z3E1 657 aaKnown RBP16.06■□□□□ 0.16
CUX2-202ENST00000397643 FAM129CQ86XR2 697 aa16.06■□□□□ 0.16
CUX2-202ENST00000397643 NPWQ8N729 165 aa16.06■□□□□ 0.16
CUX2-202ENST00000397643 OR8K1Q8NGG5 319 aa16.06■□□□□ 0.16
CUX2-202ENST00000397643 SYN2Q92777 582 aaPredicted RBP16.06■□□□□ 0.16
CUX2-202ENST00000397643 MIB2Q96AX9 1013 aa16.06■□□□□ 0.16
CUX2-202ENST00000397643 DTD2Q96FN9 168 aa16.06■□□□□ 0.16
CUX2-202ENST00000397643 SCARF2Q96GP6 870 aaPredicted RBP16.06■□□□□ 0.16
CUX2-202ENST00000397643 ABHD17AQ96GS6 310 aa16.06■□□□□ 0.16
CUX2-202ENST00000397643 MCEEQ96PE7 176 aa16.06■□□□□ 0.16
CUX2-202ENST00000397643 CINPQ9BW66 212 aaPredicted RBP16.06■□□□□ 0.16
CUX2-202ENST00000397643 ZNHIT6Q9NWK9 470 aaKnown RBP16.06■□□□□ 0.16
CUX2-202ENST00000397643 GPATCH2LQ9NWQ4 482 aa16.06■□□□□ 0.16
CUX2-202ENST00000397643 AIPL1Q9NZN9 384 aa16.06■□□□□ 0.16
CUX2-202ENST00000397643 PLEKHM1Q9Y4G2 1056 aa16.06■□□□□ 0.16
CUX2-202ENST00000397643 HTRA2O43464 458 aaPredicted RBP16.05■□□□□ 0.16
CUX2-202ENST00000397643 MFAP3LO75121 409 aa16.05■□□□□ 0.16
CUX2-202ENST00000397643 HEXIM1O94992 359 aaKnown RBP16.05■□□□□ 0.16
CUX2-202ENST00000397643 SOD1P00441 154 aa16.05■□□□□ 0.16
CUX2-202ENST00000397643 IVLP07476 585 aa16.05■□□□□ 0.16
CUX2-202ENST00000397643 ETV3P41162 512 aa16.05■□□□□ 0.16
CUX2-202ENST00000397643 FASLGP48023 281 aa16.05■□□□□ 0.16
CUX2-202ENST00000397643 CD97P48960 835 aa16.05■□□□□ 0.16
CUX2-202ENST00000397643 AP1S1P61966 158 aa16.05■□□□□ 0.16
CUX2-202ENST00000397643 GPLD1P80108 840 aa16.05■□□□□ 0.16
CUX2-202ENST00000397643 OGDHQ02218 1023 aa16.05■□□□□ 0.16
CUX2-202ENST00000397643 CA9Q16790 459 aa16.05■□□□□ 0.16
CUX2-202ENST00000397643 HSD11B1LQ7Z5J1 315 aa16.05■□□□□ 0.16
CUX2-202ENST00000397643 ZNF761Q86XN6 746 aaPredicted RBP16.05■□□□□ 0.16
CUX2-202ENST00000397643 UNC5BQ8IZJ1 945 aa16.05■□□□□ 0.16
CUX2-202ENST00000397643 NLGN4XQ8N0W4 816 aa16.05■□□□□ 0.16
CUX2-202ENST00000397643 SPC24Q8NBT2 197 aa16.05■□□□□ 0.16
CUX2-202ENST00000397643 NLGN4YQ8NFZ3 816 aaPredicted RBP16.05■□□□□ 0.16
CUX2-202ENST00000397643 TEFMQ96QE5 360 aaKnown RBP16.05■□□□□ 0.16
CUX2-202ENST00000397643 DPYSL5Q9BPU6 564 aa16.05■□□□□ 0.16
CUX2-202ENST00000397643 CNPY3Q9BT09 278 aa16.05■□□□□ 0.16
CUX2-202ENST00000397643 GPN2Q9H9Y4 310 aaPredicted RBP16.05■□□□□ 0.16
CUX2-202ENST00000397643 KCNK4Q9NYG8 393 aa16.05■□□□□ 0.16
CUX2-202ENST00000397643 BLACEA4D250 179 aa16.04■□□□□ 0.16
CUX2-202ENST00000397643 ARHGAP42A6NI28 874 aa16.04■□□□□ 0.16
CUX2-202ENST00000397643 CALB1P05937 261 aa16.04■□□□□ 0.16
CUX2-202ENST00000397643 TEAD1P28347 426 aa16.04■□□□□ 0.16
CUX2-202ENST00000397643 ACTR1BP42025 376 aa16.04■□□□□ 0.16
CUX2-202ENST00000397643 SCNN1BP51168 640 aa16.04■□□□□ 0.16
CUX2-202ENST00000397643 ACTR1AP61163 376 aa16.04■□□□□ 0.16
CUX2-202ENST00000397643 RFTN1Q14699 578 aaPredicted RBP16.04■□□□□ 0.16
CUX2-202ENST00000397643 ATP1A1-AS1Q5TC04 95 aa16.04■□□□□ 0.16
CUX2-202ENST00000397643 APOBEC4Q8WW27 367 aaKnown RBP16.04■□□□□ 0.16
CUX2-202ENST00000397643 PSKH2Q96QS6 385 aa16.04■□□□□ 0.16
CUX2-202ENST00000397643 CTRCQ99895 268 aa16.04■□□□□ 0.16
CUX2-202ENST00000397643 SP110Q9HB58 689 aa16.04■□□□□ 0.16
CUX2-202ENST00000397643 TMEM184BQ9Y519 407 aaPredicted RBP16.04■□□□□ 0.16
CUX2-202ENST00000397643 TTC24A2A3L6 582 aaPredicted RBP16.03■□□□□ 0.16
CUX2-202ENST00000397643 PRR19A6NJB7 356 aa16.03■□□□□ 0.16
CUX2-202ENST00000397643 MAP4P27816 1152 aaKnown RBP16.03■□□□□ 0.16
CUX2-202ENST00000397643 VIPR1P32241 457 aa16.03■□□□□ 0.16
CUX2-202ENST00000397643 MC2RQ01718 297 aa16.03■□□□□ 0.16
CUX2-202ENST00000397643 IL10RBQ08334 325 aa16.03■□□□□ 0.16
CUX2-202ENST00000397643 KLHL30Q0D2K2 578 aa16.03■□□□□ 0.16
CUX2-202ENST00000397643 BIRC2Q13490 618 aa16.03■□□□□ 0.16
CUX2-202ENST00000397643 DEFB109BQ30KR1 87 aa16.03■□□□□ 0.16
CUX2-202ENST00000397643 LACTB2Q53H82 288 aaPredicted RBP16.03■□□□□ 0.16
CUX2-202ENST00000397643 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.03■□□□□ 0.16
CUX2-202ENST00000397643 DNAJC24Q6P3W2 148 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms