RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 LILRA4P59901 499 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 NFE2Q16621 373 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 RFX4Q33E94 735 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 LSM12Q3MHD2 195 aaKnown RBP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 LCN8Q6JVE9 175 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 GADL1Q6ZQY3 521 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 GK5Q6ZS86 529 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 ATG16L2Q8NAA4 619 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 B3GALNT2Q8NCR0 500 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 FUBP3Q96I24 572 aaKnown RBP eCLIP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 SYTL2Q9HCH5 934 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 SLC13A4Q9UKG4 626 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 EVPLLA8MZ36 301 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 UGT1A9O60656 530 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 GOT1P17174 413 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 ATF4P18848 351 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-205ENST00000397611 UGT1A6P19224 532 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 TYMPP19971 482 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 UGT1A1P22309 533 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 UGT1A4P22310 534 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 ARRB2P32121 409 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 UGT1A3P35503 534 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 UGT1A5P35504 534 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 ENTPD1P49961 510 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 SERPINH1P50454 418 aaKnown RBP5.44□□□□□ -1.54
PTPRD-205ENST00000397611 SUOXP51687 545 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 EEFSECP57772 596 aaKnown RBP5.44□□□□□ -1.54
PTPRD-205ENST00000397611 FKBP1BP68106 108 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 CRADDP78560 199 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 KCTD8Q6ZWB6 473 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 PHTF2Q8N3S3 785 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 FSTL5Q8N475 847 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-205ENST00000397611 PROX1Q92786 737 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 PHF21BQ96EK2 531 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 C1QTNF1Q9BXJ1 281 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 HDHD2Q9H0R4 259 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 UGT1A7Q9HAW7 530 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 UGT1A10Q9HAW8 530 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 UGT1A8Q9HAW9 530 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 CCM2LQ9NUG4 571 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-205ENST00000397611 NDFIP2Q9NV92 336 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 IMPAD1Q9NX62 359 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 XPR1Q9UBH6 696 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 FBXW11Q9UKB1 542 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 SNX8Q9Y5X2 465 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 TSPAN4O14817 238 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 GRID2O43424 1007 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 IPO13O94829 963 aaKnown RBP5.44□□□□□ -1.54
PTPRD-205ENST00000397611 IGLV3-25P01717 112 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 CPB1P15086 417 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 ZNF37AP17032 561 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-205ENST00000397611 CES1P23141 567 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 POU1F1P28069 291 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 HOXA11P31270 313 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-205ENST00000397611 TAS2R39P59534 338 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 GNA12Q03113 381 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 CSTF3Q12996 717 aaKnown RBP5.44□□□□□ -1.54
PTPRD-205ENST00000397611 TRIP4Q15650 581 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-205ENST00000397611 MAVSQ7Z434 540 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 SCUBE3Q8IX30 993 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 OFCC1Q8IZS5 231 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 PELI3Q8N2H9 469 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 SLC2A14Q8TDB8 520 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 CATSPERBQ9H7T0 1116 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 NRP2O60462 931 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 KPNA6O60684 536 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 KATNA1O75449 491 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 MYO1DO94832 1006 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 MLLT6P55198 1093 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-205ENST00000397611 CDH15P55291 814 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 COX10Q12887 443 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 SMU1Q2TAY7 513 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 ZNF284Q2VY69 593 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 CES4AQ5XG92 561 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 NIPAL1Q6NVV3 410 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 CRTC3Q6UUV7 619 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 DSELQ8IZU8 1212 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 FBXO30Q8TB52 745 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 ITFG1Q8TB96 612 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 TBATAQ96M53 351 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 PIPSLA2A3N6 862 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 SNTNA6NMZ2 147 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 FXYD1O00168 92 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 FADS2O95864 444 aaKnown RBP5.44□□□□□ -1.54
PTPRD-205ENST00000397611 KRT6AP02538 564 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 KPNA1P52294 538 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-205ENST00000397611 ACAP2Q15057 778 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 LDLRAD1Q5T700 205 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 TTC23Q5W5X9 447 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 PTRH1Q86Y79 214 aaKnown RBP5.44□□□□□ -1.54
PTPRD-205ENST00000397611 HERC6Q8IVU3 1022 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 ATPAF2Q8N5M1 289 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 TRPV3Q8NET8 790 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 GAB3Q8WWW8 586 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 OLFM1Q99784 485 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 MLPHQ9BV36 600 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-205ENST00000397611 SP110Q9HB58 689 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 TREX1Q9NSU2 369 aa5.44□□□□□ -1.54
PTPRD-205ENST00000397611 ACTR3BQ9P1U1 418 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 536.4 ms