RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 METTL18O95568 372 aa25.28■■□□□ 1.64
TSPAN4-207ENST00000397411 SRP54P61011 504 aaKnown RBP25.28■■□□□ 1.64
TSPAN4-207ENST00000397411 SPARCL1Q14515 664 aa25.28■■□□□ 1.64
TSPAN4-207ENST00000397411 SIX1Q15475 284 aaPredicted RBP25.28■■□□□ 1.64
TSPAN4-207ENST00000397411 TMC3Q7Z5M5 1100 aa25.28■■□□□ 1.64
TSPAN4-207ENST00000397411 OR56A4Q8NGH8 313 aa25.28■■□□□ 1.64
TSPAN4-207ENST00000397411 MS4A14Q96JA4 679 aa25.28■■□□□ 1.64
TSPAN4-207ENST00000397411 OSBPL9Q96SU4 736 aa25.28■■□□□ 1.64
TSPAN4-207ENST00000397411 TBL1YQ9BQ87 522 aa25.28■■□□□ 1.64
TSPAN4-207ENST00000397411 GORASP1Q9BQQ3 440 aa25.28■■□□□ 1.64
TSPAN4-207ENST00000397411 FTSJ1Q9UET6 329 aa25.28■■□□□ 1.64
TSPAN4-207ENST00000397411 APOBEC3BQ9UH17 382 aaKnown RBP25.28■■□□□ 1.64
TSPAN4-207ENST00000397411 SPO11Q9Y5K1 396 aa25.28■■□□□ 1.64
TSPAN4-207ENST00000397411 SPAARA0A1B0GVQ0 90 aa25.27■■□□□ 1.64
TSPAN4-207ENST00000397411 FFAR2O15552 330 aa25.27■■□□□ 1.64
TSPAN4-207ENST00000397411 LDOC1O95751 146 aaPredicted RBP25.27■■□□□ 1.64
TSPAN4-207ENST00000397411 ALPPL2P10696 532 aa25.27■■□□□ 1.64
TSPAN4-207ENST00000397411 MYCLP1P12525 358 aaPredicted RBP25.27■■□□□ 1.64
TSPAN4-207ENST00000397411 TEAD1P28347 426 aa25.27■■□□□ 1.64
TSPAN4-207ENST00000397411 SIM1P81133 766 aaPredicted RBP25.27■■□□□ 1.64
TSPAN4-207ENST00000397411 ALS2CLQ60I27 953 aa25.27■■□□□ 1.64
TSPAN4-207ENST00000397411 RTP4Q96DX8 246 aa25.27■■□□□ 1.64
TSPAN4-207ENST00000397411 LGR4Q9BXB1 951 aa25.27■■□□□ 1.64
TSPAN4-207ENST00000397411 SPATA16Q9BXB7 569 aa25.27■■□□□ 1.64
TSPAN4-207ENST00000397411 TEX101Q9BY14 249 aa25.27■■□□□ 1.64
TSPAN4-207ENST00000397411 UCKL1Q9NWZ5 548 aa25.27■■□□□ 1.64
TSPAN4-207ENST00000397411 KLF15Q9UIH9 416 aa25.27■■□□□ 1.64
TSPAN4-207ENST00000397411 CNOT1A5YKK6 2376 aaKnown RBP25.26■■□□□ 1.63
TSPAN4-207ENST00000397411 TMEM202A6NGA9 273 aa25.26■■□□□ 1.63
TSPAN4-207ENST00000397411 E7EVH7 732 aa25.26■■□□□ 1.63
TSPAN4-207ENST00000397411 FDFT1P37268 417 aa25.26■■□□□ 1.63
TSPAN4-207ENST00000397411 CDK3Q00526 305 aa25.26■■□□□ 1.63
TSPAN4-207ENST00000397411 ALG11Q2TAA5 492 aa25.26■■□□□ 1.63
TSPAN4-207ENST00000397411 PRRT3Q5FWE3 981 aa25.26■■□□□ 1.63
TSPAN4-207ENST00000397411 DRICH1Q6PGQ1 229 aaPredicted RBP25.26■■□□□ 1.63
TSPAN4-207ENST00000397411 ADAMTSL4Q6UY14 1074 aa25.26■■□□□ 1.63
TSPAN4-207ENST00000397411 RANBP10Q6VN20 620 aa25.26■■□□□ 1.63
TSPAN4-207ENST00000397411 ERMP1Q7Z2K6 904 aa25.26■■□□□ 1.63
TSPAN4-207ENST00000397411 GLT6D1Q7Z4J2 308 aa25.26■■□□□ 1.63
TSPAN4-207ENST00000397411 RBFAQ8N0V3 343 aa25.26■■□□□ 1.63
TSPAN4-207ENST00000397411 SLC25A45Q8N413 288 aa25.26■■□□□ 1.63
TSPAN4-207ENST00000397411 RASGEF1CQ8N431 466 aa25.26■■□□□ 1.63
TSPAN4-207ENST00000397411 HIC2Q96JB3 615 aa25.26■■□□□ 1.63
TSPAN4-207ENST00000397411 CDH19Q9H159 772 aa25.26■■□□□ 1.63
TSPAN4-207ENST00000397411 LRRC40Q9H9A6 602 aa25.26■■□□□ 1.63
TSPAN4-207ENST00000397411 BPIFA1Q9NP55 256 aa25.26■■□□□ 1.63
TSPAN4-207ENST00000397411 PAK5Q9P286 719 aa25.26■■□□□ 1.63
TSPAN4-207ENST00000397411 SNX12Q9UMY4 172 aa25.26■■□□□ 1.63
TSPAN4-207ENST00000397411 DOLKQ9UPQ8 538 aa25.26■■□□□ 1.63
TSPAN4-207ENST00000397411 PGRMC1O00264 195 aaKnown RBP25.25■■□□□ 1.63
TSPAN4-207ENST00000397411 AURKAO14965 403 aa25.25■■□□□ 1.63
TSPAN4-207ENST00000397411 INPP4BO15327 924 aa25.25■■□□□ 1.63
TSPAN4-207ENST00000397411 AQP9O43315 295 aa25.25■■□□□ 1.63
TSPAN4-207ENST00000397411 USP12O75317 370 aa25.25■■□□□ 1.63
TSPAN4-207ENST00000397411 ETS1P14921 441 aa25.25■■□□□ 1.63
TSPAN4-207ENST00000397411 ADRA1AP35348 466 aa25.25■■□□□ 1.63
TSPAN4-207ENST00000397411 KCNJ1P48048 391 aa25.25■■□□□ 1.63
TSPAN4-207ENST00000397411 HK3P52790 923 aa25.25■■□□□ 1.63
TSPAN4-207ENST00000397411 C1orf61Q13536 156 aa25.25■■□□□ 1.63
TSPAN4-207ENST00000397411 DOK6Q6PKX4 331 aa25.25■■□□□ 1.63
TSPAN4-207ENST00000397411 PDCD7Q8N8D1 485 aaKnown RBP25.25■■□□□ 1.63
TSPAN4-207ENST00000397411 CNDP2Q96KP4 475 aaKnown RBP25.25■■□□□ 1.63
TSPAN4-207ENST00000397411 AGAP2Q99490 1192 aa25.25■■□□□ 1.63
TSPAN4-207ENST00000397411 AP1M1Q9BXS5 423 aa25.25■■□□□ 1.63
TSPAN4-207ENST00000397411 TCEAL2Q9H3H9 227 aaPredicted RBP25.25■■□□□ 1.63
TSPAN4-207ENST00000397411 SUDS3Q9H7L9 328 aaPredicted RBP25.25■■□□□ 1.63
TSPAN4-207ENST00000397411 CAAP1Q9H8G2 361 aa25.25■■□□□ 1.63
TSPAN4-207ENST00000397411 CYP4F12Q9HCS2 524 aa25.25■■□□□ 1.63
TSPAN4-207ENST00000397411 FEZ2Q9UHY8 353 aaPredicted RBP25.25■■□□□ 1.63
TSPAN4-207ENST00000397411 PKP3Q9Y446 797 aa25.25■■□□□ 1.63
TSPAN4-207ENST00000397411 DMXL1Q9Y485 3027 aa25.24■■□□□ 1.63
TSPAN4-207ENST00000397411 C2orf81A6NN90 581 aa25.24■■□□□ 1.63
TSPAN4-207ENST00000397411 TNFRSF10CO14798 259 aa25.24■■□□□ 1.63
TSPAN4-207ENST00000397411 SCAMP1O15126 338 aa25.24■■□□□ 1.63
TSPAN4-207ENST00000397411 CBFA2T3O75081 653 aa25.24■■□□□ 1.63
TSPAN4-207ENST00000397411 ASMTLO95671 621 aa25.24■■□□□ 1.63
TSPAN4-207ENST00000397411 TCP1P17987 556 aaKnown RBP25.24■■□□□ 1.63
TSPAN4-207ENST00000397411 OLIG2Q13516 323 aa25.24■■□□□ 1.63
TSPAN4-207ENST00000397411 C4orf22Q6V702 233 aa25.24■■□□□ 1.63
TSPAN4-207ENST00000397411 ZNF548Q8NEK5 533 aaPredicted RBP25.24■■□□□ 1.63
TSPAN4-207ENST00000397411 COG1Q8WTW3 980 aa25.24■■□□□ 1.63
TSPAN4-207ENST00000397411 MAGOHBQ96A72 148 aaKnown RBP25.24■■□□□ 1.63
TSPAN4-207ENST00000397411 EID2BQ96D98 161 aa25.24■■□□□ 1.63
TSPAN4-207ENST00000397411 ETNK1Q9HBU6 452 aa25.24■■□□□ 1.63
TSPAN4-207ENST00000397411 TTC7AQ9ULT0 858 aaPredicted RBP25.24■■□□□ 1.63
TSPAN4-207ENST00000397411 CSNK1G3Q9Y6M4 447 aa25.24■■□□□ 1.63
TSPAN4-207ENST00000397411 STX7O15400 261 aaKnown RBP25.23■■□□□ 1.63
TSPAN4-207ENST00000397411 ANXA6P08133 673 aa25.23■■□□□ 1.63
TSPAN4-207ENST00000397411 HMGCLP35914 325 aa25.23■■□□□ 1.63
TSPAN4-207ENST00000397411 ELOCQ15369 112 aa25.23■■□□□ 1.63
TSPAN4-207ENST00000397411 CCDC157Q569K6 752 aa25.23■■□□□ 1.63
TSPAN4-207ENST00000397411 KANSL1Q7Z3B3 1105 aa25.23■■□□□ 1.63
TSPAN4-207ENST00000397411 PRUNE1Q86TP1 453 aa25.23■■□□□ 1.63
TSPAN4-207ENST00000397411 LINC00523Q86TU6 105 aa25.23■■□□□ 1.63
TSPAN4-207ENST00000397411 FSTL5Q8N475 847 aaPredicted RBP25.23■■□□□ 1.63
TSPAN4-207ENST00000397411 PRELID2Q8N945 189 aa25.23■■□□□ 1.63
TSPAN4-207ENST00000397411 GPR26Q8NDV2 337 aa25.23■■□□□ 1.63
TSPAN4-207ENST00000397411 SCG3Q8WXD2 468 aaKnown RBP25.23■■□□□ 1.63
TSPAN4-207ENST00000397411 OR1E3Q8WZA6 343 aa25.23■■□□□ 1.63
TSPAN4-207ENST00000397411 NAPGQ99747 312 aaPredicted RBP25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms