RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 CYP11B1P15538 503 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 GM2AP17900 193 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 SDC4P31431 198 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 PTPN9P43378 593 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 CSNK1DP48730 415 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 PER3P56645 1201 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 NOMO3P69849 1222 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 MC2RQ01718 297 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 CDK18Q07002 472 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 ILF3Q12906 894 aaKnown RBP eCLIP9.4□□□□□ -0.9
NEDD9-203ENST00000397378 CHAF1BQ13112 559 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 PEX6Q13608 980 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 RAPGEF1Q13905 1077 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 CDO1Q16878 200 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 C15orf59Q2T9L4 293 aaPredicted RBP9.4□□□□□ -0.9
NEDD9-203ENST00000397378 PARP15Q460N3 678 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 CCDC14Q49A88 953 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 CFAP58Q5T655 872 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 AFMIDQ63HM1 303 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 SLC6A19Q695T7 634 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 PNCKQ6P2M8 343 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 TMEM71Q6P5X7 295 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 NAGSQ8N159 534 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 EMC1Q8N766 993 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 CENPIQ92674 756 aaPredicted RBP9.4□□□□□ -0.9
NEDD9-203ENST00000397378 NTAN1Q96AB6 310 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 ECHDC3Q96DC8 303 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 SNRNP40Q96DI7 357 aaKnown RBP9.4□□□□□ -0.9
NEDD9-203ENST00000397378 EXOC2Q96KP1 924 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 CARS2Q9HA77 564 aaKnown RBP9.4□□□□□ -0.9
NEDD9-203ENST00000397378 ACSS2Q9NR19 701 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 METTL5Q9NRN9 209 aaKnown RBP9.4□□□□□ -0.9
NEDD9-203ENST00000397378 ASF1BQ9NVP2 202 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 UBA2Q9UBT2 640 aaPredicted RBP9.4□□□□□ -0.9
NEDD9-203ENST00000397378 MOSPD1Q9UJG1 213 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 PCDHGA9Q9Y5G4 932 aaKnown RBP9.4□□□□□ -0.9
NEDD9-203ENST00000397378 C2CD4BA6NLJ0 364 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 WASH4PA8MWX3 477 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 RASA4BC9J798 803 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 POLR1CO15160 346 aaPredicted RBP9.39□□□□□ -0.91
NEDD9-203ENST00000397378 PPM1DO15297 605 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 RASA4O43374 803 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 CREG1O75629 220 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 NADKO95544 446 aaPredicted RBP9.39□□□□□ -0.91
NEDD9-203ENST00000397378 FUCA1P04066 466 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 EPHB2P29323 1055 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 SERPINA4P29622 427 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 CASP14P31944 242 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 CCL11P51671 97 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 HDAC4P56524 1084 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 GPLD1P80108 840 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 MAP7Q14244 749 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 TESK1Q15569 626 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 ZRSR2Q15696 482 aaKnown RBP9.39□□□□□ -0.91
NEDD9-203ENST00000397378 CHRNA6Q15825 494 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 CPZQ66K79 652 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 DPY19L2P1Q6NXN4 242 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 DPPA4Q7L190 304 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 CAMK1DQ8IU85 385 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 UMODL1-AS1Q8N2C9 162 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 PELI3Q8N2H9 469 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 CCDC185Q8N715 623 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 PATE1Q8WXA2 126 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 RXFP2Q8WXD0 754 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 CPA5Q8WXQ8 436 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 AHCYL2Q96HN2 611 aaKnown RBP9.39□□□□□ -0.91
NEDD9-203ENST00000397378 TEX101Q9BY14 249 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 FRMD8Q9BZ67 464 aaPredicted RBP9.39□□□□□ -0.91
NEDD9-203ENST00000397378 ULBP3Q9BZM4 244 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 ATP13A3Q9H7F0 1226 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 SUDS3Q9H7L9 328 aaPredicted RBP9.39□□□□□ -0.91
NEDD9-203ENST00000397378 PDFQ9HBH1 243 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 FBXO8Q9NRD0 319 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 PHPT1Q9NRX4 125 aaPredicted RBP9.39□□□□□ -0.91
NEDD9-203ENST00000397378 KCTD5Q9NXV2 234 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 ZNF451Q9Y4E5 1061 aa9.39□□□□□ -0.91
NEDD9-203ENST00000397378 BIN1O00499 593 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 TEX33O43247 280 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 LRRTM2O43300 516 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 ZG16O60844 167 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 CEACAM5P06731 702 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 SNRPB2P08579 225 aaKnown RBP9.38□□□□□ -0.91
NEDD9-203ENST00000397378 NFKBIAP25963 317 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 AK4P27144 223 aaPredicted RBP9.38□□□□□ -0.91
NEDD9-203ENST00000397378 ERCC5P28715 1186 aaPredicted RBP9.38□□□□□ -0.91
NEDD9-203ENST00000397378 PTGER4P35408 488 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 FASLGP48023 281 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 POLR2LP62875 67 aaKnown RBP9.38□□□□□ -0.91
NEDD9-203ENST00000397378 TAF3Q5VWG9 929 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 NAA35Q5VZE5 725 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 SLC30A9Q6PML9 568 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 ARHGAP22Q7Z5H3 698 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 SLFN11Q7Z7L1 901 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 SRLQ86TD4 932 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 CREBRFQ8IUR6 639 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 IQCKQ8N0W5 287 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 GPT2Q8TD30 523 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 SPOCK2Q92563 424 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 PNPLA2Q96AD5 504 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 STAMBPL1Q96FJ0 436 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms