RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 CFAP73A6NFT4 308 aa14.91□□□□□ -0.02
CAPN3-207ENST00000397200 C1QTNF3-AMACRE9PGA6 284 aa14.91□□□□□ -0.02
CAPN3-207ENST00000397200 TRAFD1O14545 582 aaPredicted RBP14.91□□□□□ -0.02
CAPN3-207ENST00000397200 SNNO75324 88 aaPredicted RBP14.91□□□□□ -0.02
CAPN3-207ENST00000397200 SPRP35270 261 aaPredicted RBP14.91□□□□□ -0.02
CAPN3-207ENST00000397200 SERPINB8P50452 374 aa14.91□□□□□ -0.02
CAPN3-207ENST00000397200 PCID2Q5JVF3 399 aa14.91□□□□□ -0.02
CAPN3-207ENST00000397200 PDPK2PQ6A1A2 396 aa14.91□□□□□ -0.02
CAPN3-207ENST00000397200 KIAA1211LQ6NV74 962 aa14.91□□□□□ -0.02
CAPN3-207ENST00000397200 RANBP10Q6VN20 620 aa14.91□□□□□ -0.02
CAPN3-207ENST00000397200 KCNMB4Q86W47 210 aa14.91□□□□□ -0.02
CAPN3-207ENST00000397200 MMAAQ8IVH4 418 aaKnown RBP14.91□□□□□ -0.02
CAPN3-207ENST00000397200 OR2T3Q8NH03 318 aa14.91□□□□□ -0.02
CAPN3-207ENST00000397200 PIP4K2CQ8TBX8 421 aa14.91□□□□□ -0.02
CAPN3-207ENST00000397200 KLHL32Q96NJ5 620 aa14.91□□□□□ -0.02
CAPN3-207ENST00000397200 APOL2Q9BQE5 337 aa14.91□□□□□ -0.02
CAPN3-207ENST00000397200 ADGRE3Q9BY15 652 aa14.91□□□□□ -0.02
CAPN3-207ENST00000397200 SLC13A1Q9BZW2 595 aa14.91□□□□□ -0.02
CAPN3-207ENST00000397200 CHRAC1Q9NRG0 131 aa14.91□□□□□ -0.02
CAPN3-207ENST00000397200 DCDC2Q9UHG0 476 aa14.91□□□□□ -0.02
CAPN3-207ENST00000397200 PPM1HQ9ULR3 514 aa14.91□□□□□ -0.02
CAPN3-207ENST00000397200 PCDHB9Q9Y5E1 797 aa14.91□□□□□ -0.02
CAPN3-207ENST00000397200 NCOR1O75376 2440 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 LOC285095A0A1B0GVY8 99 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 KPNA3O00505 521 aaPredicted RBP14.9□□□□□ -0.02
CAPN3-207ENST00000397200 HTRA2O43464 458 aaPredicted RBP14.9□□□□□ -0.02
CAPN3-207ENST00000397200 PLIN3O60664 434 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 PGLSO95336 258 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 EPOP01588 193 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 PRKCGP05129 697 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 COL9A1P20849 921 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 NMBRP28336 390 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 ALDH3A1P30838 453 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 RPS9P46781 194 aaKnown RBP14.9□□□□□ -0.02
CAPN3-207ENST00000397200 PSMD8P48556 350 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 OCRLQ01968 901 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 TTC31Q49AM3 519 aaPredicted RBP14.9□□□□□ -0.02
CAPN3-207ENST00000397200 FAM46CQ5VWP2 391 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 ATG16L1Q676U5 607 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 ZNF776Q68DI1 518 aaPredicted RBP14.9□□□□□ -0.02
CAPN3-207ENST00000397200 PACS2Q86VP3 889 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 VOPP1Q96AW1 172 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 CLDN23Q96B33 292 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 PPP1R16AQ96I34 528 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 TRIB3Q96RU7 358 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 TRIM55Q9BYV6 548 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 RSPH9Q9H1X1 276 aaPredicted RBP14.9□□□□□ -0.02
CAPN3-207ENST00000397200 SLC40A1Q9NP59 571 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 NPHS2Q9NP85 383 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 IL1RAPL1Q9NZN1 696 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 TXNDC16Q9P2K2 825 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 GGT7Q9UJ14 662 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 TCAF1Q9Y4C2 921 aa14.9□□□□□ -0.02
CAPN3-207ENST00000397200 A0A1W2PQ67 120 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 H0YHG0 523 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 FZD6O60353 706 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 NDST3O95803 873 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 PDHA1P08559 390 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 HLA-DPA1P20036 260 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 COPAP53621 1224 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 EPHB1P54762 984 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 SATB1Q01826 763 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 BST1Q10588 318 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 GALNT3Q14435 633 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 CRY1Q16526 586 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 POM121L1PQ3SYA9 428 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 ZNF805Q5CZA5 627 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 CES4AQ5XG92 561 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 BRAT1Q6PJG6 821 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 TMEM92Q6UXU6 159 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 ASRGL1Q7L266 308 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 SYT13Q7L8C5 426 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 NLRP9Q7RTR0 991 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 STRA8Q7Z7C7 330 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 CLEC14AQ86T13 490 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 DCLK2Q8N568 766 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 SLC25A41Q8N5S1 370 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 LPCAT1Q8NF37 534 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 RFWD2Q8NHY2 731 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 RMDN1Q96DB5 314 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 RANBP9Q96S59 729 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 MECRQ9BV79 373 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 MYLK2Q9H1R3 596 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 CHRDQ9H2X0 955 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 KCNK13Q9HB14 408 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 POLMQ9NP87 494 aaPredicted RBP14.89□□□□□ -0.03
CAPN3-207ENST00000397200 DYRK4Q9NR20 520 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 SNX15Q9NRS6 342 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 SARDHQ9UL12 918 aa14.89□□□□□ -0.03
CAPN3-207ENST00000397200 TCRBV21S2A2A0A5A6 115 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 DNAJC6O75061 913 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 UNC5CO95185 931 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 TOP3BO95985 862 aaKnown RBP14.88□□□□□ -0.03
CAPN3-207ENST00000397200 ADH1BP00325 375 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 PDGFBP01127 241 aaPredicted RBP14.88□□□□□ -0.03
CAPN3-207ENST00000397200 PRLP01236 227 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 PROCP04070 461 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 FGF1P05230 155 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 DCNP07585 359 aaKnown RBP14.88□□□□□ -0.03
CAPN3-207ENST00000397200 ATXN1LP0C7T5 689 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms