RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 FUBP1Q96AE4 644 aaKnown RBP14.55□□□□□ -0.08
SEC13-208ENST00000397109 AGAP3Q96P47 875 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 LYSMD1Q96S90 227 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 LRRC61Q9BV99 259 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 SLC25A51Q9H1U9 297 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 CARD9Q9H257 536 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 TCEAL2Q9H3H9 227 aaPredicted RBP14.55□□□□□ -0.08
SEC13-208ENST00000397109 PHPT1Q9NRX4 125 aaPredicted RBP14.55□□□□□ -0.08
SEC13-208ENST00000397109 DOLKQ9UPQ8 538 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 EFR3BQ9Y2G0 817 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 DGKBQ9Y6T7 804 aa14.55□□□□□ -0.08
SEC13-208ENST00000397109 PLXNB3Q9ULL4 1909 aa14.54□□□□□ -0.08
SEC13-208ENST00000397109 CAPN8A6NHC0 703 aa14.54□□□□□ -0.08
SEC13-208ENST00000397109 HACD1B0YJ81 288 aa14.54□□□□□ -0.08
SEC13-208ENST00000397109 ANKRD66B4E2M5 251 aa14.54□□□□□ -0.08
SEC13-208ENST00000397109 GCATO75600 419 aa14.54□□□□□ -0.08
SEC13-208ENST00000397109 PYGLP06737 847 aa14.54□□□□□ -0.08
SEC13-208ENST00000397109 MMP2P08253 660 aa14.54□□□□□ -0.08
SEC13-208ENST00000397109 JUPP14923 745 aa14.54□□□□□ -0.08
SEC13-208ENST00000397109 ETV3P41162 512 aa14.54□□□□□ -0.08
SEC13-208ENST00000397109 C1orf61Q13536 156 aa14.54□□□□□ -0.08
SEC13-208ENST00000397109 LLGL1Q15334 1064 aa14.54□□□□□ -0.08
SEC13-208ENST00000397109 ST3GAL2Q16842 350 aa14.54□□□□□ -0.08
SEC13-208ENST00000397109 DEFB133Q30KQ1 61 aa14.54□□□□□ -0.08
SEC13-208ENST00000397109 LRRC66Q68CR7 880 aa14.54□□□□□ -0.08
SEC13-208ENST00000397109 Q6ZVL8 140 aa14.54□□□□□ -0.08
SEC13-208ENST00000397109 BBS12Q6ZW61 710 aa14.54□□□□□ -0.08
SEC13-208ENST00000397109 ZNF765Q7L2R6 523 aa14.54□□□□□ -0.08
SEC13-208ENST00000397109 TECPR1Q7Z6L1 1165 aa14.54□□□□□ -0.08
SEC13-208ENST00000397109 NRSN1Q8IZ57 195 aa14.54□□□□□ -0.08
SEC13-208ENST00000397109 CACTIN-AS1Q8N1I8 211 aa14.54□□□□□ -0.08
SEC13-208ENST00000397109 KDF1Q8NAX2 398 aaPredicted RBP14.54□□□□□ -0.08
SEC13-208ENST00000397109 LPCAT1Q8NF37 534 aa14.54□□□□□ -0.08
SEC13-208ENST00000397109 ACTRT1Q8TDG2 376 aa14.54□□□□□ -0.08
SEC13-208ENST00000397109 IMP4Q96G21 291 aaKnown RBP14.54□□□□□ -0.08
SEC13-208ENST00000397109 MLPHQ9BV36 600 aaPredicted RBP14.54□□□□□ -0.08
SEC13-208ENST00000397109 CAAP1Q9H8G2 361 aa14.54□□□□□ -0.08
SEC13-208ENST00000397109 SAE1Q9UBE0 346 aaPredicted RBP14.54□□□□□ -0.08
SEC13-208ENST00000397109 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.54□□□□□ -0.08
SEC13-208ENST00000397109 PNMA8BQ9ULN7 279 aaPredicted RBP14.54□□□□□ -0.08
SEC13-208ENST00000397109 V9GYY5 206 aaPredicted RBP14.54□□□□□ -0.08
SEC13-208ENST00000397109 CACNA1BQ00975 2339 aa14.53□□□□□ -0.08
SEC13-208ENST00000397109 RRP9O43818 475 aaKnown RBP14.53□□□□□ -0.08
SEC13-208ENST00000397109 ERLIN1O75477 346 aa14.53□□□□□ -0.08
SEC13-208ENST00000397109 GP1BAP07359 652 aa14.53□□□□□ -0.08
SEC13-208ENST00000397109 MYCLP1P12525 358 aaPredicted RBP14.53□□□□□ -0.08
SEC13-208ENST00000397109 PECAM1P16284 738 aaPredicted RBP14.53□□□□□ -0.08
SEC13-208ENST00000397109 STC1P52823 247 aa14.53□□□□□ -0.08
SEC13-208ENST00000397109 PTSQ03393 145 aa14.53□□□□□ -0.08
SEC13-208ENST00000397109 XRCC4Q13426 336 aa14.53□□□□□ -0.08
SEC13-208ENST00000397109 PTPRRQ15256 657 aa14.53□□□□□ -0.08
SEC13-208ENST00000397109 QPCTQ16769 361 aa14.53□□□□□ -0.08
SEC13-208ENST00000397109 C6orf132Q5T0Z8 1188 aa14.53□□□□□ -0.08
SEC13-208ENST00000397109 RAET1GQ6H3X3 334 aa14.53□□□□□ -0.08
SEC13-208ENST00000397109 RD3Q7Z3Z2 195 aa14.53□□□□□ -0.08
SEC13-208ENST00000397109 GKN2Q86XP6 184 aa14.53□□□□□ -0.08
SEC13-208ENST00000397109 SPATA4Q8NEY3 305 aa14.53□□□□□ -0.08
SEC13-208ENST00000397109 TEKT5Q96M29 485 aa14.53□□□□□ -0.08
SEC13-208ENST00000397109 RBM15Q96T37 977 aaKnown RBP eCLIP14.53□□□□□ -0.088e-6■■□□□ 12.8
SEC13-208ENST00000397109 VAT1Q99536 393 aa14.53□□□□□ -0.08
SEC13-208ENST00000397109 FERMT1Q9BQL6 677 aa14.53□□□□□ -0.08
SEC13-208ENST00000397109 BOCQ9BWV1 1114 aa14.53□□□□□ -0.08
SEC13-208ENST00000397109 TEX101Q9BY14 249 aa14.53□□□□□ -0.08
SEC13-208ENST00000397109 PARD6BQ9BYG5 372 aa14.53□□□□□ -0.08
SEC13-208ENST00000397109 CEP41Q9BYV8 373 aa14.53□□□□□ -0.08
SEC13-208ENST00000397109 CLPBQ9H078 707 aa14.53□□□□□ -0.08
SEC13-208ENST00000397109 GLOD4Q9HC38 313 aa14.53□□□□□ -0.08
SEC13-208ENST00000397109 TTC7AQ9ULT0 858 aaPredicted RBP14.53□□□□□ -0.08
SEC13-208ENST00000397109 ASXL3Q9C0F0 2248 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 GOLGA6CA6NDK9 693 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 GOLGA6BA6NDN3 693 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 TMEM202A6NGA9 273 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 APOC4-APOC2K7ER74 178 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 YY2O15391 372 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 APOC2P02655 101 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 GOLGA6DP0CG33 693 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 PYGMP11217 842 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 PTPN3P26045 913 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 GPR1P46091 355 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 ADCY2Q08462 1091 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 NR0B2Q15466 257 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 FBXO38Q6PIJ6 1188 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 HEATR4Q86WZ0 1026 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 CCHCR1Q8TD31 782 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 OR1E3Q8WZA6 343 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 TADA1Q96BN2 335 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 AP2M1Q96CW1 435 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 SRPK1Q96SB4 655 aaKnown RBP14.52□□□□□ -0.08
SEC13-208ENST00000397109 LGR4Q9BXB1 951 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 HEMGNQ9BXL5 484 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 OSBPL8Q9BZF1 889 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 ABCG8Q9H221 673 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 GOLGA6AQ9NYA3 693 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 IGF2RP11717 2491 aa14.52□□□□□ -0.08
SEC13-208ENST00000397109 LY6G6EA0A0G2JKS1 128 aa14.51□□□□□ -0.09
SEC13-208ENST00000397109 C1orf232A0A0U1RR37 186 aa14.51□□□□□ -0.09
SEC13-208ENST00000397109 EME2A4GXA9 379 aaPredicted RBP14.51□□□□□ -0.09
SEC13-208ENST00000397109 RGSL1A5PLK6 1076 aa14.51□□□□□ -0.09
SEC13-208ENST00000397109 CLDN7O95471 211 aa14.51□□□□□ -0.09
SEC13-208ENST00000397109 CDK3Q00526 305 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms