RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 NAE1Q13564 534 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 PPP1R26Q5T8A7 1209 aaPredicted RBP7.18□□□□□ -1.26
UPF2-203ENST00000397053 WASH2PQ6VEQ5 465 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 SAPCD2Q86UD0 394 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 DNAAF5Q86Y56 855 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 RASGRP3Q8IV61 690 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 LRRC52Q8N7C0 313 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 PTCD2Q8WV60 388 aaKnown RBP7.18□□□□□ -1.26
UPF2-203ENST00000397053 MYDGFQ969H8 173 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 SLC35C1Q96A29 364 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 TSSK3Q96PN8 268 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 OSBPL2Q9H1P3 480 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 KCTD5Q9NXV2 234 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 OGDHLQ9ULD0 1010 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 CDC14AQ9UNH5 594 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 TPRP12270 2363 aaKnown RBP7.18□□□□□ -1.26
UPF2-203ENST00000397053 A0A087WXM4 84 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 A0A1W2PQ72 361 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 CCDC162PA2VCL2 907 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 ANKRD63C9JTQ0 380 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 H0YGN5 161 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 ZNF823P16415 610 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 FAUP35544 74 aaKnown RBP7.18□□□□□ -1.26
UPF2-203ENST00000397053 SELENOVP59797 346 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 DLG1Q12959 904 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 ITIH4Q14624 930 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 DUSP28Q4G0W2 176 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 APOBEC3HQ6NTF7 200 aaKnown RBP7.18□□□□□ -1.26
UPF2-203ENST00000397053 ZNF730Q6ZMV8 503 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 FAM183BPQ6ZVS7 135 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 TMC3Q7Z5M5 1100 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 TSEN15Q8WW01 171 aaKnown RBP7.18□□□□□ -1.26
UPF2-203ENST00000397053 OXNAD1Q96HP4 312 aaPredicted RBP7.18□□□□□ -1.26
UPF2-203ENST00000397053 APOLD1Q96LR9 279 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 SRMSQ9H3Y6 488 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 OAS3Q9Y6K5 1087 aaKnown RBP7.18□□□□□ -1.26
UPF2-203ENST00000397053 CLDN5O00501 218 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 FFAR2O15552 330 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 RIPK2O43353 540 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 MAFO75444 373 aaPredicted RBP7.18□□□□□ -1.26
UPF2-203ENST00000397053 TSPOAP1O95153 1857 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 TRBC1P01850 177 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 PROCP04070 461 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 C8AP07357 584 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 PRLRP16471 622 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 CAPGP40121 348 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 MC1RQ01726 317 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 SWI5Q1ZZU3 235 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 GFOD2Q3B7J2 385 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 MLIPQ5VWP3 458 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 CFAP206Q8IYR0 622 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 FBXO15Q8NCQ5 510 aaPredicted RBP7.18□□□□□ -1.26
UPF2-203ENST00000397053 C1orf50Q9BV19 199 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 LACRTQ9GZZ8 138 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 EPB41L1Q9H4G0 881 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 PADI3Q9ULW8 664 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 A0A1W2PRG6 482 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 RB1P06400 928 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 GJB1P08034 283 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 SNRPB2P08579 225 aaKnown RBP7.18□□□□□ -1.26
UPF2-203ENST00000397053 AHCYP23526 432 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 CLCN7P51798 805 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 GPM6BQ13491 265 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 KCNA10Q16322 511 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 GDF6Q6KF10 455 aaPredicted RBP7.18□□□□□ -1.26
UPF2-203ENST00000397053 KDM7AQ6ZMT4 941 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 MSANTD1Q6ZTZ1 278 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 CRYBG2Q8N1P7 616 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 LNX2Q8N448 690 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 KREMEN2Q8NCW0 462 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 OR4A15Q8NGL6 344 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 VANGL1Q8TAA9 524 aaPredicted RBP7.18□□□□□ -1.26
UPF2-203ENST00000397053 SEMA6AQ9H2E6 1030 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 GNEQ9Y223 722 aaKnown RBP7.18□□□□□ -1.26
UPF2-203ENST00000397053 GLTPD2A6NH11 291 aa7.17□□□□□ -1.26
UPF2-203ENST00000397053 EML1O00423 815 aa7.17□□□□□ -1.26
UPF2-203ENST00000397053 KPNA4O00629 521 aaPredicted RBP7.17□□□□□ -1.26
UPF2-203ENST00000397053 TPP1O14773 563 aa7.17□□□□□ -1.26
UPF2-203ENST00000397053 CYP3A4P08684 503 aa7.17□□□□□ -1.26
UPF2-203ENST00000397053 GRIA3P42263 894 aa7.17□□□□□ -1.26
UPF2-203ENST00000397053 MATKP42679 507 aa7.17□□□□□ -1.26
UPF2-203ENST00000397053 RFX5P48382 616 aaPredicted RBP7.17□□□□□ -1.26
UPF2-203ENST00000397053 TSPAN5P62079 268 aa7.17□□□□□ -1.26
UPF2-203ENST00000397053 MRPS5P82675 430 aaKnown RBP7.17□□□□□ -1.26
UPF2-203ENST00000397053 ENPEPQ07075 957 aa7.17□□□□□ -1.26
UPF2-203ENST00000397053 CYP4F3Q08477 520 aa7.17□□□□□ -1.26
UPF2-203ENST00000397053 PIK3R6Q5UE93 754 aa7.17□□□□□ -1.26
UPF2-203ENST00000397053 PYHIN1Q6K0P9 492 aa7.17□□□□□ -1.26
UPF2-203ENST00000397053 POTEHQ6S545 545 aa7.17□□□□□ -1.26
UPF2-203ENST00000397053 SLC22A15Q8IZD6 547 aa7.17□□□□□ -1.26
UPF2-203ENST00000397053 TOP6BLQ8N6T0 577 aa7.17□□□□□ -1.26
UPF2-203ENST00000397053 ETNPPLQ8TBG4 499 aa7.17□□□□□ -1.26
UPF2-203ENST00000397053 GDPD5Q8WTR4 605 aa7.17□□□□□ -1.26
UPF2-203ENST00000397053 EXOSC8Q96B26 276 aaKnown RBP7.17□□□□□ -1.26
UPF2-203ENST00000397053 CDH19Q9H159 772 aa7.17□□□□□ -1.26
UPF2-203ENST00000397053 DDX4Q9NQI0 724 aaKnown RBP7.17□□□□□ -1.26
UPF2-203ENST00000397053 APC2O95996 2303 aa7.17□□□□□ -1.26
UPF2-203ENST00000397053 NRKQ7Z2Y5 1582 aa7.17□□□□□ -1.26
UPF2-203ENST00000397053 BRWD1Q9NSI6 2320 aa7.17□□□□□ -1.26
UPF2-203ENST00000397053 ATP6AP2A0A1C7CYW4 349 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms