RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 LINGO4Q6UY18 593 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 CERS6Q6ZMG9 384 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 CYP4V2Q6ZWL3 525 aaPredicted RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 ZNF534Q76KX8 674 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 AMIGO2Q86SJ2 522 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 C2CD4AQ8NCU7 369 aaPredicted RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 C3orf58Q8NDZ4 430 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 SPDYE1Q8NFV5 336 aaPredicted RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 OR13C4Q8NGS5 318 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 CD99L2Q8TCZ2 262 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 MZB1Q8WU39 189 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 TWIST2Q8WVJ9 160 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 RMND5BQ96G75 393 aaPredicted RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 CDKN2AIPNLQ96HQ2 116 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 WDR83Q9BRX9 315 aaKnown RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 HIPK3Q9H422 1215 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 CCSER2Q9H7U1 834 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 TLE6Q9H808 572 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 KCNK13Q9HB14 408 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 CACYBPQ9HB71 228 aaKnown RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 TMLHEQ9NVH6 421 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 COMMD8Q9NX08 183 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 GNPTGQ9UJJ9 305 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 PPM1HQ9ULR3 514 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 AP4B1Q9Y6B7 739 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 COL4A5P29400 1685 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 LTBP1Q14766 1721 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 OTCP00480 354 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 EPOP01588 193 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 OR56A5P0C7T3 313 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 RPL17P18621 184 aaKnown RBP6.54□□□□□ -1.36
BDNF-203ENST00000395978 PEX2P28328 305 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 SLC26A3P40879 764 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 HALP42357 657 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 MAGEA3P43357 314 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 KCNQ1P51787 676 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 SNRPD1P62314 119 aaKnown RBP6.54□□□□□ -1.36
BDNF-203ENST00000395978 POLR2LP62875 67 aaKnown RBP6.54□□□□□ -1.36
BDNF-203ENST00000395978 CDC16Q13042 620 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 GTF2H3Q13889 308 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 TRIM25Q14258 630 aaKnown RBP6.54□□□□□ -1.36
BDNF-203ENST00000395978 ALFQ53S48 1182 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 RBFAQ8N0V3 343 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 MCOLN3Q8TDD5 553 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 NT5C3BQ969T7 300 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 VPS33AQ96AX1 596 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 SH3KBP1Q96B97 665 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 FAM120BQ96EK7 910 aaKnown RBP6.54□□□□□ -1.36
BDNF-203ENST00000395978 RNF145Q96MT1 663 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 INTS10Q9NVR2 710 aaKnown RBP6.54□□□□□ -1.36
BDNF-203ENST00000395978 ARL15Q9NXU5 204 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 KIF17Q9P2E2 1029 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 KLQ9UEF7 1012 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 ANAPC2Q9UJX6 822 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 MYRFQ9Y2G1 1151 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 TBC1D30Q9Y2I9 924 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 ARL5AQ9Y689 179 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 EVPLQ92817 2033 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 ARFGEF1Q9Y6D6 1849 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 TMEM233B4DJY2 109 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 M0QZQ0 153 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 ULK1O75385 1050 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 ANXA5P08758 320 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 SLC35E2BP0CK96 405 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 FGFR3P22607 806 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 SP100P23497 879 aaPredicted RBP6.54□□□□□ -1.36
BDNF-203ENST00000395978 RPL5P46777 297 aaKnown RBP6.54□□□□□ -1.36
BDNF-203ENST00000395978 RALGDSQ12967 914 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 KRT33BQ14525 404 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 RFTN1Q14699 578 aaPredicted RBP6.54□□□□□ -1.36
BDNF-203ENST00000395978 TSNQ15631 228 aaKnown RBP6.54□□□□□ -1.36
BDNF-203ENST00000395978 CRY1Q16526 586 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 RAB41Q5JT25 222 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 OTUD3Q5T2D3 398 aaPredicted RBP6.54□□□□□ -1.36
BDNF-203ENST00000395978 FAM91A1Q658Y4 838 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 USP45Q70EL2 814 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 SPATA19Q7Z5L4 167 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 METTL3Q86U44 580 aaKnown RBP6.54□□□□□ -1.36
BDNF-203ENST00000395978 CILP2Q8IUL8 1156 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 CENPLQ8N0S6 344 aaPredicted RBP6.54□□□□□ -1.36
BDNF-203ENST00000395978 GANCQ8TET4 914 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 UTP4Q969X6 686 aaKnown RBP6.54□□□□□ -1.36
BDNF-203ENST00000395978 IMP4Q96G21 291 aaKnown RBP6.54□□□□□ -1.36
BDNF-203ENST00000395978 MRGPRX2Q96LB1 330 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 PPP3R2Q96LZ3 170 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 BTBD9Q96Q07 612 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 CIPCQ9C0C6 399 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 TFB2MQ9H5Q4 396 aaKnown RBP6.54□□□□□ -1.36
BDNF-203ENST00000395978 CSNK1G1Q9HCP0 422 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.54□□□□□ -1.36
BDNF-203ENST00000395978 SRRDQ9UH36 339 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 TIMM22Q9Y584 194 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 KCTD3Q9Y597 815 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 PCDHB1Q9Y5F3 818 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 COPG1Q9Y678 874 aaKnown RBP6.54□□□□□ -1.36
BDNF-203ENST00000395978 DHRS12A0PJE2 317 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 TMEM247A6NEH6 219 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 SLC22A3O75751 556 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 OAZ2O95190 189 aa6.54□□□□□ -1.36
BDNF-203ENST00000395978 EPB42P16452 691 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms