RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 SLC39A8Q9C0K1 460 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 LIN28AQ9H9Z2 209 aaKnown RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 KLHL11Q9NVR0 708 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 SPG21Q9NZD8 308 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 SELENONQ9NZV5 590 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 ZC3H7BQ9UGR2 993 aaKnown RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 RIMS3Q9UJD0 308 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 MID2Q9UJV3 735 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 APPL1Q9UKG1 709 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 CNOT11Q9UKZ1 510 aaKnown RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 TCAF1Q9Y4C2 921 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 A0A087X1B8 175 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 SERTM1A2A2V5 107 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 NPIPB8E9PQR5 432 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 ACSL4O60488 711 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 BANF1O75531 89 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 TRPA1O75762 1119 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 FUCA1P04066 466 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 SSTR1P30872 391 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 ALDH18A1P54886 795 aaKnown RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 AQP5P55064 265 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 BST1Q10588 318 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 C16orf72Q14CZ0 275 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 ZNF829Q3KNS6 432 aaPredicted RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 SPATS1Q496A3 300 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 METTL21CQ5VZV1 264 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 KAZNQ674X7 775 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 ATG16L1Q676U5 607 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 NIPAL1Q6NVV3 410 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 ARID3BQ8IVW6 561 aaPredicted RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 CBARPQ8N350 705 aaPredicted RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 POU5F2Q8N7G0 328 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 ADCY4Q8NFM4 1077 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 GABPB2Q8TAK5 448 aaPredicted RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 CHPT1Q8WUD6 406 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 CNBD2Q96M20 576 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 ZNF558Q96NG5 402 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 HEPHQ9BQS7 1158 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 HAUS8Q9BT25 410 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 C20orf27Q9GZN8 174 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 CRISPLD1Q9H336 500 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 RHOJQ9H4E5 214 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 ZNF385DQ9H6B1 395 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 C12orf49Q9H741 205 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 INTS10Q9NVR2 710 aaKnown RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 UTP6Q9NYH9 597 aaKnown RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 TRIM64BA6NI03 449 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 TRIM64CA6NLI5 447 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 I3L4J1 428 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 IFRD1O00458 451 aaPredicted RBP5.36□□□□□ -1.55
VPS41-203ENST00000395969 ZBTB24O43167 697 aaPredicted RBP5.36□□□□□ -1.55
VPS41-203ENST00000395969 MT-ND3P03897 115 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 PROCP04070 461 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 FGF1P05230 155 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 CTSHP09668 335 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 HSPA8P11142 646 aaKnown RBP5.36□□□□□ -1.55
VPS41-203ENST00000395969 ITGAXP20702 1163 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 RPS3P23396 243 aaKnown RBP eCLIP5.36□□□□□ -1.55
VPS41-203ENST00000395969 TMED10P49755 219 aaKnown RBP5.36□□□□□ -1.55
VPS41-203ENST00000395969 CLCN4P51793 760 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 TUBA4AP68366 448 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 TXNL4AP83876 142 aaKnown RBP5.36□□□□□ -1.55
VPS41-203ENST00000395969 CDKL1Q00532 357 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 PPIGQ13427 754 aaKnown RBP eCLIP5.36□□□□□ -1.558e-9■□□□□ 9.9
VPS41-203ENST00000395969 ADGRE1Q14246 886 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 IYDQ6PHW0 289 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 CDHR3Q6ZTQ4 885 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 LPCAT2Q7L5N7 544 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 AMIGO2Q86SJ2 522 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 ANKMY2Q8IV38 441 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 HERC6Q8IVU3 1022 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 CHERPQ8IWX8 916 aaKnown RBP5.36□□□□□ -1.55
VPS41-203ENST00000395969 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.36□□□□□ -1.55
VPS41-203ENST00000395969 CALML6Q8TD86 181 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 CDKL2Q92772 493 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 BORCS5Q969J3 196 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 FAM131CQ96AQ9 280 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 TMIGD2Q96BF3 282 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 CNDP1Q96KN2 507 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 UBXN10Q96LJ8 280 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 GPR78Q96P69 363 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 FAM193BQ96PV7 902 aaPredicted RBP5.36□□□□□ -1.55
VPS41-203ENST00000395969 TBL1YQ9BQ87 522 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 EBF4Q9BQW3 602 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 APOL6Q9BWW8 343 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 PALMDQ9NP74 551 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 TBC1D23Q9NUY8 699 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 DNAJC28Q9NX36 388 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 GMIPQ9P107 970 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 SAE1Q9UBE0 346 aaPredicted RBP5.36□□□□□ -1.55
VPS41-203ENST00000395969 EMCNQ9ULC0 261 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 VANGL2Q9ULK5 521 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 ARHGAP26Q9UNA1 814 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 NOD1Q9Y239 953 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 TRIM17Q9Y577 477 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 GPC6Q9Y625 555 aaPredicted RBP5.36□□□□□ -1.55
VPS41-203ENST00000395969 TRBV5-4A0A0C4DH59 114 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 HEATR9A2RTY3 570 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 H0YJX3 145 aa5.36□□□□□ -1.55
VPS41-203ENST00000395969 GOLGA8TH3BQL2 631 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms