RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 TCAIMQ8N3R3 496 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 OR4K2Q8NGD2 314 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 STK32AQ8WU08 396 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 PTCD3Q96EY7 689 aaKnown RBP10.38□□□□□ -0.75
COL4A6-203ENST00000394872 PRKAB1Q9Y478 270 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 BAZ2BQ9UIF8 2168 aaKnown RBP10.38□□□□□ -0.75
COL4A6-203ENST00000394872 IL12RB1P42701 662 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 LGALS3BPQ08380 585 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 POMZP3Q6PJE2 187 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 ISLR2Q6UXK2 745 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 ARHGAP36Q6ZRI8 547 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 ARCQ7LC44 396 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 XYLT1Q86Y38 959 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 MYDGFQ969H8 173 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 PCDHB1Q9Y5F3 818 aa10.38□□□□□ -0.75
COL4A6-203ENST00000394872 IQCMA0A1B0GVH7 501 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 ARL5CA6NH57 179 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 FFAR2O15552 330 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 PIAS1O75925 651 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 INHAP05111 366 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 IDO1P14902 403 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 STAT5AP42229 794 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 TEAD4Q15561 434 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 BMT2Q1RMZ1 405 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 SPESP1Q6UW49 350 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 TMC5Q6UXY8 1006 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 PTF1AQ7RTS3 328 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 DEPDC4Q8N2C3 294 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 MSL3Q8N5Y2 521 aaKnown RBP10.37□□□□□ -0.75
COL4A6-203ENST00000394872 SLC47A1Q96FL8 570 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 MAML3Q96JK9 1138 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 FAM84AQ96KN4 292 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 SLC9A7Q96T83 725 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 EXD2Q9NVH0 621 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 OSER1Q9NX31 292 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 ELOVL2Q9NXB9 296 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 ZNF490Q9ULM2 529 aaPredicted RBP10.37□□□□□ -0.75
COL4A6-203ENST00000394872 EPHB6O15197 1021 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 UGT1A5P35504 534 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 GABRB2P47870 512 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 SRP54P61011 504 aaKnown RBP10.37□□□□□ -0.75
COL4A6-203ENST00000394872 CCNYL2Q5T2Q4 361 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 FAM129CQ86XR2 697 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 MCEMP1Q8IX19 187 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 AP2M1Q96CW1 435 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 PWWP2AQ96N64 755 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 COQ7Q99807 217 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 TRIM38O00635 465 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 CDH5P33151 784 aaPredicted RBP10.37□□□□□ -0.75
COL4A6-203ENST00000394872 PPP2R2DQ66LE6 453 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 NAIF1Q69YI7 327 aaPredicted RBP10.37□□□□□ -0.75
COL4A6-203ENST00000394872 NEK7Q8TDX7 302 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 FEM1CQ96JP0 617 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 GGA2Q9UJY4 613 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 RBM7Q9Y580 266 aaKnown RBP10.37□□□□□ -0.75
COL4A6-203ENST00000394872 RHPN2P1A8MT19 583 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 CDK14O94921 469 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 MATN4O95460 622 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 TNFRSF8P28908 595 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 ZNF132P52740 706 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 CYP4F3Q08477 520 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 PRKG2Q13237 762 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 LCLAT1Q6UWP7 414 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 KCNN2Q9H2S1 579 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 CRISPLD1Q9H336 500 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 PRDM8Q9NQV8 689 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 ERVW-1Q9UQF0 538 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 MRPS17Q9Y2R5 130 aaKnown RBP10.37□□□□□ -0.75
COL4A6-203ENST00000394872 SAMHD1Q9Y3Z3 626 aaKnown RBP10.37□□□□□ -0.75
COL4A6-203ENST00000394872 COL3A1P02461 1466 aaPredicted RBP10.37□□□□□ -0.75
COL4A6-203ENST00000394872 ATP6AP2A0A1C7CYW4 349 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 SYN3O14994 580 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 BIRC5O15392 142 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 LGR5O75473 907 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 ATP6AP2O75787 350 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 CPTPQ5TA50 214 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 PRELID2Q8N945 189 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 INPP4AQ96PE3 977 aaPredicted RBP10.37□□□□□ -0.75
COL4A6-203ENST00000394872 EPB41L1Q9H4G0 881 aa10.37□□□□□ -0.75
COL4A6-203ENST00000394872 NOL6Q9H6R4 1146 aaKnown RBP10.37□□□□□ -0.75
COL4A6-203ENST00000394872 TGFB1I1O43294 461 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 LYPLA2O95372 231 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 SMPD1P17405 629 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 NT5EP21589 574 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 ADRA1BP35368 520 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 CACNG1Q06432 222 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 BNIP2Q12982 314 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 TTMPQ5BVD1 217 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 HECTD2Q5U5R9 776 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 MZT2BQ6NZ67 158 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 ADCY4Q8NFM4 1077 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 IRGQQ8WZA9 623 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 EMID1Q96A84 441 aaPredicted RBP10.36□□□□□ -0.75
COL4A6-203ENST00000394872 ZNF184Q99676 751 aaPredicted RBP10.36□□□□□ -0.75
COL4A6-203ENST00000394872 CMTM6Q9NX76 183 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 PACSIN3Q9UKS6 424 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 ARHGEF28Q8N1W1 1705 aaKnown RBP10.36□□□□□ -0.75
COL4A6-203ENST00000394872 KHDRBS3O75525 346 aaKnown RBP10.36□□□□□ -0.75
COL4A6-203ENST00000394872 TRBC1P01850 177 aa10.36□□□□□ -0.75
COL4A6-203ENST00000394872 CYP3A5P20815 502 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms