RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 UNC5CO95185 931 aa20.3■□□□□ 0.84
PRKCD-202ENST00000394729 PAPSS2O95340 614 aaPredicted RBP20.3■□□□□ 0.84
PRKCD-202ENST00000394729 ARHGAP8P85298 464 aa20.3■□□□□ 0.84
PRKCD-202ENST00000394729 FRG1Q14331 258 aaKnown RBP20.3■□□□□ 0.84
PRKCD-202ENST00000394729 C12orf40Q86WS4 652 aa20.3■□□□□ 0.84
PRKCD-202ENST00000394729 ADGRG2Q8IZP9 1017 aa20.3■□□□□ 0.84
PRKCD-202ENST00000394729 ZNF707Q96C28 371 aaPredicted RBP20.3■□□□□ 0.84
PRKCD-202ENST00000394729 ASIC4Q96FT7 647 aa20.3■□□□□ 0.84
PRKCD-202ENST00000394729 MRPL46Q9H2W6 279 aaKnown RBP20.3■□□□□ 0.84
PRKCD-202ENST00000394729 BAIAP2L1Q9UHR4 511 aa20.3■□□□□ 0.84
PRKCD-202ENST00000394729 COL6A3P12111 3177 aa20.29■□□□□ 0.84
PRKCD-202ENST00000394729 PRAMEF1O95521 474 aa20.29■□□□□ 0.84
PRKCD-202ENST00000394729 PABPC1P11940 636 aaKnown RBP20.29■□□□□ 0.84
PRKCD-202ENST00000394729 CRABP2P29373 138 aa20.29■□□□□ 0.84
PRKCD-202ENST00000394729 CLCN5P51795 746 aa20.29■□□□□ 0.84
PRKCD-202ENST00000394729 UBXN8O00124 270 aa20.29■□□□□ 0.84
PRKCD-202ENST00000394729 MTX2O75431 263 aa20.29■□□□□ 0.84
PRKCD-202ENST00000394729 PGLSO95336 258 aa20.29■□□□□ 0.84
PRKCD-202ENST00000394729 LTA4HP09960 611 aaKnown RBP20.29■□□□□ 0.84
PRKCD-202ENST00000394729 OR2AP1Q8NGE2 309 aa20.29■□□□□ 0.84
PRKCD-202ENST00000394729 PIH1D2Q8WWB5 315 aa20.29■□□□□ 0.84
PRKCD-202ENST00000394729 NKX2-4Q9H2Z4 354 aa20.29■□□□□ 0.84
PRKCD-202ENST00000394729 ZFYVE1Q9HBF4 777 aa20.29■□□□□ 0.84
PRKCD-202ENST00000394729 TNFRSF12AQ9NP84 129 aa20.29■□□□□ 0.84
PRKCD-202ENST00000394729 IKZF3Q9UKT9 509 aa20.29■□□□□ 0.84
PRKCD-202ENST00000394729 TRIOBPQ9H2D6 2365 aa20.28■□□□□ 0.84
PRKCD-202ENST00000394729 TIAL1Q01085 375 aaKnown RBP eCLIP20.28■□□□□ 0.84
PRKCD-202ENST00000394729 PFKFB4Q16877 469 aa20.28■□□□□ 0.84
PRKCD-202ENST00000394729 LIPMQ5VYY2 423 aa20.28■□□□□ 0.84
PRKCD-202ENST00000394729 TMEM198Q66K66 360 aa20.28■□□□□ 0.84
PRKCD-202ENST00000394729 ZYG11AQ6WRX3 759 aa20.28■□□□□ 0.84
PRKCD-202ENST00000394729 FAM43BQ6ZT52 329 aaPredicted RBP20.28■□□□□ 0.84
PRKCD-202ENST00000394729 TRIM67Q6ZTA4 783 aa20.28■□□□□ 0.84
PRKCD-202ENST00000394729 KIAA0408Q6ZU52 694 aa20.28■□□□□ 0.84
PRKCD-202ENST00000394729 ACDQ96AP0 544 aa20.28■□□□□ 0.84
PRKCD-202ENST00000394729 PLCD4Q9BRC7 762 aa20.28■□□□□ 0.84
PRKCD-202ENST00000394729 NCKIPSDQ9NZQ3 722 aa20.28■□□□□ 0.84
PRKCD-202ENST00000394729 SLC30A1Q9Y6M5 507 aa20.28■□□□□ 0.84
PRKCD-202ENST00000394729 SUPT7LO94864 414 aa20.28■□□□□ 0.84
PRKCD-202ENST00000394729 IGSF6O95976 241 aa20.28■□□□□ 0.84
PRKCD-202ENST00000394729 HLA-EP13747 358 aa20.28■□□□□ 0.84
PRKCD-202ENST00000394729 OR52B2Q96RD2 323 aa20.28■□□□□ 0.84
PRKCD-202ENST00000394729 DENND4CQ5VZ89 1909 aa20.28■□□□□ 0.84
PRKCD-202ENST00000394729 ATP6AP2A0A1C7CYW4 349 aa20.27■□□□□ 0.84
PRKCD-202ENST00000394729 E5RI56 91 aa20.27■□□□□ 0.84
PRKCD-202ENST00000394729 ATP6AP2O75787 350 aa20.27■□□□□ 0.84
PRKCD-202ENST00000394729 SH2D4BQ5SQS7 431 aa20.27■□□□□ 0.84
PRKCD-202ENST00000394729 AGAP9Q5VTM2 703 aa20.27■□□□□ 0.84
PRKCD-202ENST00000394729 C22orf39Q6P5X5 142 aa20.27■□□□□ 0.84
PRKCD-202ENST00000394729 DET1Q7L5Y6 550 aa20.27■□□□□ 0.84
PRKCD-202ENST00000394729 VN1R2Q8NFZ6 395 aa20.27■□□□□ 0.84
PRKCD-202ENST00000394729 SKA1Q96BD8 255 aa20.27■□□□□ 0.84
PRKCD-202ENST00000394729 ASB8Q9H765 288 aa20.27■□□□□ 0.84
PRKCD-202ENST00000394729 ARIH1Q9Y4X5 557 aaPredicted RBP20.27■□□□□ 0.84
PRKCD-202ENST00000394729 GON4LQ3T8J9 2241 aa20.27■□□□□ 0.84
PRKCD-202ENST00000394729 WASH3PC4AMC7 463 aa20.27■□□□□ 0.84
PRKCD-202ENST00000394729 CDC7O00311 574 aa20.27■□□□□ 0.84
PRKCD-202ENST00000394729 GSTA1P08263 222 aa20.27■□□□□ 0.84
PRKCD-202ENST00000394729 ARL1P40616 181 aaPredicted RBP20.27■□□□□ 0.84
PRKCD-202ENST00000394729 ECT2LQ008S8 904 aa20.27■□□□□ 0.84
PRKCD-202ENST00000394729 CLEC6AQ6EIG7 209 aa20.27■□□□□ 0.84
PRKCD-202ENST00000394729 KLC3Q6P597 504 aa20.27■□□□□ 0.84
PRKCD-202ENST00000394729 GBP7Q8N8V2 638 aaPredicted RBP20.27■□□□□ 0.84
PRKCD-202ENST00000394729 GABPB2Q8TAK5 448 aaPredicted RBP20.27■□□□□ 0.84
PRKCD-202ENST00000394729 KLHL32Q96NJ5 620 aa20.27■□□□□ 0.84
PRKCD-202ENST00000394729 WWP1Q9H0M0 922 aa20.27■□□□□ 0.84
PRKCD-202ENST00000394729 ATP13A3Q9H7F0 1226 aa20.27■□□□□ 0.84
PRKCD-202ENST00000394729 COMMD10Q9Y6G5 202 aa20.27■□□□□ 0.84
PRKCD-202ENST00000394729 KNL1Q8NG31 2342 aa20.27■□□□□ 0.83
PRKCD-202ENST00000394729 LINC01565O15544 149 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 DCXO43602 365 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 SIN3BO75182 1162 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 TRIM16O95361 564 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 GRK2P25098 689 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 IDH3AP50213 366 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 METAP1P53582 386 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 MXRA7P84157 204 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 OR4D1Q15615 310 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 CTC1Q2NKJ3 1217 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 PPP2R2DQ66LE6 453 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 AFTPHQ6ULP2 937 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 FAM217AQ8IXS0 508 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 CPNE9Q8IYJ1 553 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 PHOSPHO2Q8TCD6 241 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 NSUN5Q96P11 429 aaKnown RBP20.26■□□□□ 0.83
PRKCD-202ENST00000394729 DUS2Q9NX74 493 aaKnown RBP20.26■□□□□ 0.83
PRKCD-202ENST00000394729 LZTS1Q9Y250 596 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 A8MT66 165 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 PLK4O00444 970 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 TGDSO95455 350 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 SLC6A11P48066 632 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 TSNQ15631 228 aaKnown RBP20.26■□□□□ 0.83
PRKCD-202ENST00000394729 CYB5D1Q6P9G0 228 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 CPXM2Q8N436 756 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 TTC30BQ8N4P2 665 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 EFCAB3Q8N7B9 438 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 SREK1Q8WXA9 508 aaKnown RBP20.26■□□□□ 0.83
PRKCD-202ENST00000394729 KCNK4Q9NYG8 393 aa20.26■□□□□ 0.83
PRKCD-202ENST00000394729 APOBEC2Q9Y235 224 aaKnown RBP20.26■□□□□ 0.83
PRKCD-202ENST00000394729 ANKRD6Q9Y2G4 727 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms