RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 MERTKQ12866 999 aa16.1■□□□□ 0.17
PCDH1-203ENST00000394536 PRKG2Q13237 762 aa16.1■□□□□ 0.17
PCDH1-203ENST00000394536 GLYATQ6IB77 296 aa16.1■□□□□ 0.17
PCDH1-203ENST00000394536 CDK15Q96Q40 435 aa16.1■□□□□ 0.17
PCDH1-203ENST00000394536 TMEM209Q96SK2 561 aa16.1■□□□□ 0.17
PCDH1-203ENST00000394536 ADAMTS10Q9H324 1103 aa16.1■□□□□ 0.17
PCDH1-203ENST00000394536 SMPD4Q9NXE4 827 aa16.1■□□□□ 0.17
PCDH1-203ENST00000394536 SUCOQ9UBS9 1254 aaKnown RBP16.1■□□□□ 0.17
PCDH1-203ENST00000394536 NPEPPSL1A6NEC2 478 aa16.1■□□□□ 0.17
PCDH1-203ENST00000394536 OXCT1P55809 520 aa16.1■□□□□ 0.17
PCDH1-203ENST00000394536 BRMS1LQ5PSV4 323 aa16.1■□□□□ 0.17
PCDH1-203ENST00000394536 PAQR3Q6TCH7 311 aa16.1■□□□□ 0.17
PCDH1-203ENST00000394536 MICU2Q8IYU8 434 aa16.1■□□□□ 0.17
PCDH1-203ENST00000394536 CENPNQ96H22 339 aaPredicted RBP16.1■□□□□ 0.17
PCDH1-203ENST00000394536 DGKBQ9Y6T7 804 aa16.1■□□□□ 0.17
PCDH1-203ENST00000394536 ZNF195O14628 629 aa16.1■□□□□ 0.17
PCDH1-203ENST00000394536 ENPP3O14638 875 aa16.1■□□□□ 0.17
PCDH1-203ENST00000394536 SH3BGRLO75368 114 aa16.1■□□□□ 0.17
PCDH1-203ENST00000394536 AKT1P31749 480 aa16.1■□□□□ 0.17
PCDH1-203ENST00000394536 IL2P60568 153 aa16.1■□□□□ 0.17
PCDH1-203ENST00000394536 GRB7Q14451 532 aa16.1■□□□□ 0.17
PCDH1-203ENST00000394536 ATG14Q6ZNE5 492 aa16.1■□□□□ 0.17
PCDH1-203ENST00000394536 C16orf59Q7L2K0 433 aa16.1■□□□□ 0.17
PCDH1-203ENST00000394536 LEF1Q9UJU2 399 aaPredicted RBP16.1■□□□□ 0.17
PCDH1-203ENST00000394536 A0A1W2PPW3 197 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 TYW5A2RUC4 315 aaKnown RBP16.09■□□□□ 0.17
PCDH1-203ENST00000394536 CCDC162PA2VCL2 907 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 IDO1P14902 403 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 RPS9P46781 194 aaKnown RBP16.09■□□□□ 0.17
PCDH1-203ENST00000394536 BNIP3Q12983 259 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 ARHGEF7Q14155 803 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 MARCH8Q5T0T0 291 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 EFL1Q7Z2Z2 1120 aaKnown RBP16.09■□□□□ 0.17
PCDH1-203ENST00000394536 CLHC1Q8NHS4 586 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 SLC2A13Q96QE2 648 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 TMEM165Q9HC07 324 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 ATP13A1Q9HD20 1204 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 SCUBE2Q9NQ36 999 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 COMMD8Q9NX08 183 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 RIMS3Q9UJD0 308 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 SLC22A2O15244 555 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 DPP6P42658 865 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 HCAR3P49019 387 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 ARSDP51689 593 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 MTPNP58546 118 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 MRPS6P82932 125 aaKnown RBP16.09■□□□□ 0.17
PCDH1-203ENST00000394536 FAM171A1Q5VUB5 890 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 GCNT7Q6ZNI0 430 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 TMEM26Q6ZUK4 368 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 KCTD8Q6ZWB6 473 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 UTS2BQ765I0 119 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 IFNLR1Q8IU57 520 aaPredicted RBP16.09■□□□□ 0.17
PCDH1-203ENST00000394536 SFRP1Q8N474 314 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 RTL3Q8N8U3 475 aaKnown RBP16.09■□□□□ 0.17
PCDH1-203ENST00000394536 DRAXINQ8NBI3 349 aaPredicted RBP16.09■□□□□ 0.17
PCDH1-203ENST00000394536 ARMC7Q9H6L4 198 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 MARCH4Q9P2E8 410 aaPredicted RBP16.09■□□□□ 0.17
PCDH1-203ENST00000394536 GALPQ9UBC7 116 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 PCDHGA7Q9Y5G6 932 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 TRPV2Q9Y5S1 764 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 C7orf72A4D263 438 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 SEC22BO75396 215 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 CNTN5O94779 1100 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 BNIP2Q12982 314 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 CHID1Q9BWS9 393 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 DPY30Q9C005 99 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 SMPD3Q9NY59 655 aaPredicted RBP16.09■□□□□ 0.17
PCDH1-203ENST00000394536 CDC14AQ9UNH5 594 aa16.09■□□□□ 0.17
PCDH1-203ENST00000394536 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.08■□□□□ 0.17
PCDH1-203ENST00000394536 J3QRK9 145 aa16.08■□□□□ 0.17
PCDH1-203ENST00000394536 SOCS2O14508 198 aa16.08■□□□□ 0.17
PCDH1-203ENST00000394536 CELF2O95319 508 aaKnown RBP16.08■□□□□ 0.17
PCDH1-203ENST00000394536 KCNE1P15382 129 aa16.08■□□□□ 0.17
PCDH1-203ENST00000394536 PSMB9P28065 219 aa16.08■□□□□ 0.17
PCDH1-203ENST00000394536 ZNF177Q13360 481 aaPredicted RBP16.08■□□□□ 0.17
PCDH1-203ENST00000394536 PGS1Q32NB8 556 aa16.08■□□□□ 0.17
PCDH1-203ENST00000394536 PAQR9Q6ZVX9 377 aa16.08■□□□□ 0.17
PCDH1-203ENST00000394536 LSMEM2Q8N112 164 aa16.08■□□□□ 0.17
PCDH1-203ENST00000394536 FBXL8Q96CD0 374 aa16.08■□□□□ 0.17
PCDH1-203ENST00000394536 LRRC58Q96CX6 371 aa16.08■□□□□ 0.17
PCDH1-203ENST00000394536 ASB2Q96Q27 587 aa16.08■□□□□ 0.17
PCDH1-203ENST00000394536 GMIPQ9P107 970 aa16.08■□□□□ 0.17
PCDH1-203ENST00000394536 KLQ9UEF7 1012 aa16.08■□□□□ 0.17
PCDH1-203ENST00000394536 POLG2Q9UHN1 485 aa16.08■□□□□ 0.17
PCDH1-203ENST00000394536 EIF3LQ9Y262 564 aaKnown RBP16.08■□□□□ 0.17
PCDH1-203ENST00000394536 PCDHGC4Q9Y5F7 938 aa16.08■□□□□ 0.17
PCDH1-203ENST00000394536 DNAJC25-GNG10A0A024R161 153 aa16.08■□□□□ 0.16
PCDH1-203ENST00000394536 OR4F21O95013 312 aa16.08■□□□□ 0.16
PCDH1-203ENST00000394536 GNAO1P09471 354 aa16.08■□□□□ 0.16
PCDH1-203ENST00000394536 NR1D2Q14995 579 aa16.08■□□□□ 0.16
PCDH1-203ENST00000394536 NFE2Q16621 373 aaPredicted RBP16.08■□□□□ 0.16
PCDH1-203ENST00000394536 LRRC8DQ7L1W4 858 aa16.08■□□□□ 0.16
PCDH1-203ENST00000394536 LINGO1Q96FE5 620 aa16.08■□□□□ 0.16
PCDH1-203ENST00000394536 TTC36A6NLP5 189 aa16.08■□□□□ 0.16
PCDH1-203ENST00000394536 PTGESO14684 152 aa16.08■□□□□ 0.16
PCDH1-203ENST00000394536 ARPC2O15144 300 aa16.08■□□□□ 0.16
PCDH1-203ENST00000394536 SNAP91O60641 907 aa16.08■□□□□ 0.16
PCDH1-203ENST00000394536 TNK2Q07912 1038 aa16.08■□□□□ 0.16
PCDH1-203ENST00000394536 GPRIN3Q6ZVF9 776 aa16.08■□□□□ 0.16
PCDH1-203ENST00000394536 C2CD4AQ8NCU7 369 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms