RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 EBF2Q9HAK2 575 aa15.04■□□□□ -0
GPC3-202ENST00000394299 DNMT3BQ9UBC3 853 aaKnown RBP15.04■□□□□ -0
GPC3-202ENST00000394299 INTS6Q9UL03 887 aaKnown RBP15.04■□□□□ -0
GPC3-202ENST00000394299 SH3BP1Q9Y3L3 701 aa15.04■□□□□ -0
GPC3-202ENST00000394299 KIAA0355O15063 1070 aa15.03■□□□□ -0
GPC3-202ENST00000394299 STX7O15400 261 aaKnown RBP15.03■□□□□ -0
GPC3-202ENST00000394299 BNIP3LO60238 219 aa15.03■□□□□ -0
GPC3-202ENST00000394299 MAGEC1O60732 1142 aa15.03■□□□□ -0
GPC3-202ENST00000394299 NIPSNAP2O75323 286 aa15.03■□□□□ -0
GPC3-202ENST00000394299 PDE5AO76074 875 aa15.03■□□□□ -0
GPC3-202ENST00000394299 GNAZP19086 355 aa15.03■□□□□ -0
GPC3-202ENST00000394299 OGNP20774 298 aaKnown RBP15.03■□□□□ -0
GPC3-202ENST00000394299 C1QTNF8P60827 252 aa15.03■□□□□ -0
GPC3-202ENST00000394299 LAMB3Q13751 1172 aa15.03■□□□□ -0
GPC3-202ENST00000394299 PPP1R3AQ16821 1122 aa15.03■□□□□ -0
GPC3-202ENST00000394299 INO80DQ53TQ3 878 aaPredicted RBP15.03■□□□□ -0
GPC3-202ENST00000394299 LYSMD3Q7Z3D4 306 aa15.03■□□□□ -0
GPC3-202ENST00000394299 CUZD1Q86UP6 607 aa15.03■□□□□ -0
GPC3-202ENST00000394299 CMTM8Q8IZV2 173 aa15.03■□□□□ -0
GPC3-202ENST00000394299 SNX31Q8N9S9 440 aa15.03■□□□□ -0
GPC3-202ENST00000394299 NSUN5Q96P11 429 aaKnown RBP15.03■□□□□ -0
GPC3-202ENST00000394299 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.03■□□□□ -0
GPC3-202ENST00000394299 TSR3Q9UJK0 312 aaKnown RBP15.03■□□□□ -0
GPC3-202ENST00000394299 CDYLQ9Y232 598 aa15.03■□□□□ -0
GPC3-202ENST00000394299 MYOFQ9NZM1 2061 aa15.03■□□□□ -0
GPC3-202ENST00000394299 TYW5A2RUC4 315 aaKnown RBP15.03■□□□□ -0
GPC3-202ENST00000394299 LEFTY2O00292 366 aa15.03■□□□□ -0
GPC3-202ENST00000394299 SDHDO14521 159 aa15.03■□□□□ -0
GPC3-202ENST00000394299 FZD6O60353 706 aa15.03■□□□□ -0
GPC3-202ENST00000394299 MTHFD2P13995 350 aa15.03■□□□□ -0
GPC3-202ENST00000394299 EZRP15311 586 aaKnown RBP15.03■□□□□ -0
GPC3-202ENST00000394299 PIK3R1P27986 724 aa15.03■□□□□ -0
GPC3-202ENST00000394299 PPM1AP35813 382 aa15.03■□□□□ -0
GPC3-202ENST00000394299 STK19P49842 368 aaPredicted RBP15.03■□□□□ -0
GPC3-202ENST00000394299 RAP1GDS1P52306 607 aa15.03■□□□□ -0
GPC3-202ENST00000394299 BTKQ06187 659 aa15.03■□□□□ -0
GPC3-202ENST00000394299 RCN1Q15293 331 aa15.03■□□□□ -0
GPC3-202ENST00000394299 PFKFB4Q16877 469 aa15.03■□□□□ -0
GPC3-202ENST00000394299 UNC50Q53HI1 259 aa15.03■□□□□ -0
GPC3-202ENST00000394299 PLPP4Q5VZY2 271 aa15.03■□□□□ -0
GPC3-202ENST00000394299 AFTPHQ6ULP2 937 aa15.03■□□□□ -0
GPC3-202ENST00000394299 TAS2R42Q7RTR8 314 aa15.03■□□□□ -0
GPC3-202ENST00000394299 TCF25Q9BQ70 676 aa15.03■□□□□ -0
GPC3-202ENST00000394299 NOP53Q9NZM5 478 aaKnown RBP15.03■□□□□ -0
GPC3-202ENST00000394299 RIMKLBQ9ULI2 386 aa15.03■□□□□ -0
GPC3-202ENST00000394299 PLXNA4Q9HCM2 1894 aa15.02■□□□□ -0
GPC3-202ENST00000394299 CDC7O00311 574 aa15.02■□□□□ -0
GPC3-202ENST00000394299 ITGAXP20702 1163 aa15.02■□□□□ -0
GPC3-202ENST00000394299 IMPDH1P20839 514 aa15.02■□□□□ -0
GPC3-202ENST00000394299 DGKKQ5KSL6 1271 aa15.02■□□□□ -0
GPC3-202ENST00000394299 ZNF678Q5SXM1 525 aa15.02■□□□□ -0
GPC3-202ENST00000394299 RIPOR1Q6ZS17 1223 aa15.02■□□□□ -0
GPC3-202ENST00000394299 DEFB107AQ8IZN7 70 aa15.02■□□□□ -0
GPC3-202ENST00000394299 PTGR2Q8N8N7 351 aaPredicted RBP15.02■□□□□ -0
GPC3-202ENST00000394299 SIDT2Q8NBJ9 832 aaKnown RBP15.02■□□□□ -0
GPC3-202ENST00000394299 PIH1D2Q8WWB5 315 aa15.02■□□□□ -0
GPC3-202ENST00000394299 CMTM5Q96DZ9 223 aa15.02■□□□□ -0
GPC3-202ENST00000394299 C1orf21Q9H246 121 aa15.02■□□□□ -0
GPC3-202ENST00000394299 MMADHCQ9H3L0 296 aaPredicted RBP15.02■□□□□ -0
GPC3-202ENST00000394299 LSM7Q9UK45 103 aaKnown RBP15.02■□□□□ -0
GPC3-202ENST00000394299 PTPRSQ13332 1948 aa15.02□□□□□ -0.01
GPC3-202ENST00000394299 CHD9Q3L8U1 2897 aa15.02□□□□□ -0.01
GPC3-202ENST00000394299 UNC80Q8N2C7 3258 aa15.02□□□□□ -0.01
GPC3-202ENST00000394299 A0A1B0GTL3 188 aa15.02□□□□□ -0.01
GPC3-202ENST00000394299 ATP6AP2A0A1C7CYW4 349 aa15.02□□□□□ -0.01
GPC3-202ENST00000394299 NCF1BA6NI72 391 aaPredicted RBP15.02□□□□□ -0.01
GPC3-202ENST00000394299 NCF1CA8MVU1 366 aaPredicted RBP15.02□□□□□ -0.01
GPC3-202ENST00000394299 AIM2O14862 343 aa15.02□□□□□ -0.01
GPC3-202ENST00000394299 ZNF821O75541 412 aaPredicted RBP15.02□□□□□ -0.01
GPC3-202ENST00000394299 ATP6AP2O75787 350 aa15.02□□□□□ -0.01
GPC3-202ENST00000394299 NCF1P14598 390 aaPredicted RBP15.02□□□□□ -0.01
GPC3-202ENST00000394299 CES1P23141 567 aa15.02□□□□□ -0.01
GPC3-202ENST00000394299 SUOXP51687 545 aa15.02□□□□□ -0.01
GPC3-202ENST00000394299 ASPHQ12797 758 aa15.02□□□□□ -0.01
GPC3-202ENST00000394299 CTSL3PQ5NE16 218 aa15.02□□□□□ -0.01
GPC3-202ENST00000394299 SWT1Q5T5J6 900 aaKnown RBP15.02□□□□□ -0.01
GPC3-202ENST00000394299 METTL21CQ5VZV1 264 aa15.02□□□□□ -0.01
GPC3-202ENST00000394299 ZNF783Q6ZMS7 281 aa15.02□□□□□ -0.01
GPC3-202ENST00000394299 ACAD11Q709F0 780 aa15.02□□□□□ -0.01
GPC3-202ENST00000394299 HTR3DQ70Z44 454 aa15.02□□□□□ -0.01
GPC3-202ENST00000394299 SNX32Q86XE0 403 aa15.02□□□□□ -0.01
GPC3-202ENST00000394299 DCAF4L2Q8NA75 395 aa15.02□□□□□ -0.01
GPC3-202ENST00000394299 ESAMQ96AP7 390 aa15.02□□□□□ -0.01
GPC3-202ENST00000394299 SARS2Q9NP81 518 aaKnown RBP15.02□□□□□ -0.01
GPC3-202ENST00000394299 VTI1BQ9UEU0 232 aa15.02□□□□□ -0.01
GPC3-202ENST00000394299 PSMG1O95456 288 aa15.01□□□□□ -0.01
GPC3-202ENST00000394299 XIAPP98170 497 aa15.01□□□□□ -0.01
GPC3-202ENST00000394299 TSNQ15631 228 aaKnown RBP15.01□□□□□ -0.01
GPC3-202ENST00000394299 DNAL1Q4LDG9 190 aa15.01□□□□□ -0.01
GPC3-202ENST00000394299 ZSWIM9Q86XI8 627 aa15.01□□□□□ -0.01
GPC3-202ENST00000394299 FAM217AQ8IXS0 508 aa15.01□□□□□ -0.01
GPC3-202ENST00000394299 PAF1Q8N7H5 531 aa15.01□□□□□ -0.01
GPC3-202ENST00000394299 ENDOVQ8N8Q3 282 aaKnown RBP15.01□□□□□ -0.01
GPC3-202ENST00000394299 CCDC124Q96CT7 223 aaKnown RBP15.01□□□□□ -0.01
GPC3-202ENST00000394299 GPR63Q9BZJ6 419 aa15.01□□□□□ -0.01
GPC3-202ENST00000394299 DCLRE1BQ9H816 532 aa15.01□□□□□ -0.01
GPC3-202ENST00000394299 IL23AQ9NPF7 189 aa15.01□□□□□ -0.01
GPC3-202ENST00000394299 INTS10Q9NVR2 710 aaKnown RBP15.01□□□□□ -0.01
GPC3-202ENST00000394299 IL17CQ9P0M4 197 aa15.01□□□□□ -0.01
GPC3-202ENST00000394299 C15orf41Q9Y2V0 281 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms