RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 ZIK1Q3SY52 487 aaPredicted RBP9.96□□□□□ -0.82
PSEN1-204ENST00000394164 TMEM126BQ8IUX1 230 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 TRUB1Q8WWH5 349 aaKnown RBP9.96□□□□□ -0.82
PSEN1-204ENST00000394164 HTRA1Q92743 480 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 NANOGQ9H9S0 305 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 NMRAL1Q9HBL8 299 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 CHST12Q9NRB3 414 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 CCDC167Q9P0B6 97 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 ZDHHC2Q9UIJ5 367 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 ZNF229Q9UJW7 825 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 FNDC3AQ9Y2H6 1198 aaKnown RBP9.96□□□□□ -0.82
PSEN1-204ENST00000394164 COPG1Q9Y678 874 aaKnown RBP9.96□□□□□ -0.82
PSEN1-204ENST00000394164 NOTOA8MTQ0 251 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 SCAMP3O14828 347 aaKnown RBP9.96□□□□□ -0.82
PSEN1-204ENST00000394164 KRT75O95678 551 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 CHEK2O96017 543 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 AHSGP02765 367 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 PIRTP0C851 137 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 TSPAN8P19075 237 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 ELK4P28324 431 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 ARL1P40616 181 aaPredicted RBP9.96□□□□□ -0.82
PSEN1-204ENST00000394164 LIMK2P53671 638 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 FPGSQ05932 587 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 SELENBP1Q13228 472 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 PCBP1Q15365 356 aaKnown RBP eCLIP9.96□□□□□ -0.82
PSEN1-204ENST00000394164 INTS6LQ5JSJ4 861 aaKnown RBP9.96□□□□□ -0.82
PSEN1-204ENST00000394164 GRTP1Q5TC63 336 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 IL12RB2Q99665 862 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 DGCR6LQ9BY27 220 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 ILKAPQ9H0C8 392 aaPredicted RBP9.96□□□□□ -0.82
PSEN1-204ENST00000394164 FAM96AQ9H5X1 160 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 RIC8BQ9NVN3 520 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 OSER1Q9NX31 292 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.96□□□□□ -0.82
PSEN1-204ENST00000394164 HCSTQ9UBK5 93 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 ERVK-11Q9UQG0 969 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 TCAF2A6NFQ2 919 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 C9JVG2 144 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 AP3B1O00203 1094 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 XYLBO75191 536 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 IFITM3Q01628 133 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 GALNT2Q10471 571 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 MERTKQ12866 999 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 PRPSAP1Q14558 356 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 PTPRCAPQ14761 206 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 ZNF789Q5FWF6 425 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 ARL13AQ5H913 290 aaPredicted RBP9.95□□□□□ -0.82
PSEN1-204ENST00000394164 RAB41Q5JT25 222 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 FAM209AQ5JX71 171 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 TIFABQ6ZNK6 161 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 HEATR4Q86WZ0 1026 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 RASAL3Q86YV0 1011 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 CEP97Q8IW35 865 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 TMEM86AQ8N2M4 240 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 ATAD1Q8NBU5 361 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 EXT2Q93063 718 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 GLT1D1Q96MS3 346 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 CASS4Q9NQ75 786 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 EIF2B3Q9NR50 452 aaKnown RBP9.95□□□□□ -0.82
PSEN1-204ENST00000394164 CDYLQ9Y232 598 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 TRAF6Q9Y4K3 522 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 G3V2L1 256 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 GPR182O15218 404 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 SNAP91O60641 907 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 CLPXO76031 633 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 HLA-DQB2P05538 268 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 HNRNPLP14866 589 aaKnown RBP eCLIP9.95□□□□□ -0.82
PSEN1-204ENST00000394164 CNTFP26441 200 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 RAB15P59190 212 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 RHDQ02161 417 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 KCNC4Q03721 635 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 EFEMP1Q12805 493 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 CDH17Q12864 832 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 TBCELQ5QJ74 424 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 PPP2R2DQ66LE6 453 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 ZNF470Q6ECI4 717 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 C17orf99Q6UX52 265 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 BNIPLQ7Z465 357 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 TMEM135Q86UB9 458 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 PSD4Q8NDX1 1056 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 MAGEE2Q8TD90 523 aaPredicted RBP9.95□□□□□ -0.82
PSEN1-204ENST00000394164 NXNL1Q96CM4 212 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 ASB9Q96DX5 294 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 ELMO2Q96JJ3 720 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 FEM1CQ96JP0 617 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 CSF3RQ99062 836 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 NAT9Q9BTE0 207 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 ACE2Q9BYF1 805 aaPredicted RBP9.95□□□□□ -0.82
PSEN1-204ENST00000394164 MIR1-1HGQ9H1L0 117 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 NT5MQ9NPB1 228 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 CNOT11Q9UKZ1 510 aaKnown RBP9.95□□□□□ -0.82
PSEN1-204ENST00000394164 PCDHGA7Q9Y5G6 932 aa9.95□□□□□ -0.82
PSEN1-204ENST00000394164 PRRC2BQ5JSZ5 2229 aaKnown RBP9.94□□□□□ -0.82
PSEN1-204ENST00000394164 OR51F1A6NGY5 319 aa9.94□□□□□ -0.82
PSEN1-204ENST00000394164 NT5C1B-RDH14C9J2C7 533 aa9.94□□□□□ -0.82
PSEN1-204ENST00000394164 J3KR12 359 aa9.94□□□□□ -0.82
PSEN1-204ENST00000394164 DUSP11O75319 330 aaKnown RBP9.94□□□□□ -0.82
PSEN1-204ENST00000394164 CNTN5O94779 1100 aa9.94□□□□□ -0.82
PSEN1-204ENST00000394164 TOMM70O94826 608 aa9.94□□□□□ -0.82
PSEN1-204ENST00000394164 F9P00740 461 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms