RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 LYSMD1Q96S90 227 aa22.12■■□□□ 1.13
HMGA2-203ENST00000393578 TUBB6Q9BUF5 446 aa22.12■■□□□ 1.13
HMGA2-203ENST00000393578 DNAJC28Q9NX36 388 aa22.12■■□□□ 1.13
HMGA2-203ENST00000393578 SLCO3A1Q9UIG8 710 aa22.12■■□□□ 1.13
HMGA2-203ENST00000393578 FNDC3AQ9Y2H6 1198 aaKnown RBP22.12■■□□□ 1.13
HMGA2-203ENST00000393578 FCHO1O14526 889 aa22.11■■□□□ 1.13
HMGA2-203ENST00000393578 CCDC22O60826 627 aa22.11■■□□□ 1.13
HMGA2-203ENST00000393578 TARSP26639 723 aaKnown RBP22.11■■□□□ 1.13
HMGA2-203ENST00000393578 PBX2P40425 430 aa22.11■■□□□ 1.13
HMGA2-203ENST00000393578 CCNHP51946 323 aaPredicted RBP22.11■■□□□ 1.13
HMGA2-203ENST00000393578 ADARP55265 1226 aaKnown RBP22.11■■□□□ 1.13
HMGA2-203ENST00000393578 RAD51Q06609 339 aa22.11■■□□□ 1.13
HMGA2-203ENST00000393578 CDKN3Q16667 212 aa22.11■■□□□ 1.13
HMGA2-203ENST00000393578 ISCA2Q86U28 154 aa22.11■■□□□ 1.13
HMGA2-203ENST00000393578 ZNF781Q8N8C0 355 aa22.11■■□□□ 1.13
HMGA2-203ENST00000393578 SGF29Q96ES7 293 aa22.11■■□□□ 1.13
HMGA2-203ENST00000393578 ZNF641Q96N77 438 aaPredicted RBP22.11■■□□□ 1.13
HMGA2-203ENST00000393578 RILPQ96NA2 401 aa22.11■■□□□ 1.13
HMGA2-203ENST00000393578 LRRC3BQ96PB8 259 aa22.11■■□□□ 1.13
HMGA2-203ENST00000393578 EBF4Q9BQW3 602 aa22.11■■□□□ 1.13
HMGA2-203ENST00000393578 LMAN2LQ9H0V9 348 aa22.11■■□□□ 1.13
HMGA2-203ENST00000393578 CDH19Q9H159 772 aa22.11■■□□□ 1.13
HMGA2-203ENST00000393578 SUV39H2Q9H5I1 410 aa22.11■■□□□ 1.13
HMGA2-203ENST00000393578 RAP2CQ9Y3L5 183 aa22.11■■□□□ 1.13
HMGA2-203ENST00000393578 SLC30A1Q9Y6M5 507 aa22.11■■□□□ 1.13
HMGA2-203ENST00000393578 ZNF195O14628 629 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 RHOBTB1O94844 696 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 SNUPNO95149 360 aaKnown RBP22.1■■□□□ 1.13
HMGA2-203ENST00000393578 POLR2EP19388 210 aaKnown RBP22.1■■□□□ 1.13
HMGA2-203ENST00000393578 TFEBP19484 476 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 PTPRNQ16849 979 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 DPY19L3Q6ZPD9 716 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 PIWIL4Q7Z3Z4 852 aaKnown RBP22.1■■□□□ 1.13
HMGA2-203ENST00000393578 ZSWIM9Q86XI8 627 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 PLPP6Q8IY26 295 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 NMUR2Q9GZQ4 415 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 POMKQ9H5K3 350 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 SFXN1Q9H9B4 322 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 SYTL2Q9HCH5 934 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 DUS2Q9NX74 493 aaKnown RBP22.1■■□□□ 1.13
HMGA2-203ENST00000393578 NCKIPSDQ9NZQ3 722 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 HAO1Q9UJM8 370 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 FBXO10Q9UK96 956 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 MED16Q9Y2X0 877 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 PPIL1Q9Y3C6 166 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 NUP210Q8TEM1 1887 aaPredicted RBP22.1■■□□□ 1.13
HMGA2-203ENST00000393578 NPHS1O60500 1241 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 HNRNPCL1O60812 293 aaKnown RBP22.1■■□□□ 1.13
HMGA2-203ENST00000393578 CD1DP15813 335 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 CD9P21926 228 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 SERPINB5P36952 375 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 PTGER3P43115 390 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 RASSF2P50749 326 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 HK2P52789 917 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 KRT72Q14CN4 511 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 DHCR24Q15392 516 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 ARL13AQ5H913 290 aaPredicted RBP22.1■■□□□ 1.13
HMGA2-203ENST00000393578 TMEM215Q68D42 235 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 CERS6Q6ZMG9 384 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 MAVSQ7Z434 540 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 SPNS2Q8IVW8 549 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 STK40Q8N2I9 435 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 NAT16Q8N8M0 369 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 OSCP1Q8WVF1 389 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.1■■□□□ 1.13
HMGA2-203ENST00000393578 RASSF4Q9H2L5 321 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 MTF2Q9Y483 593 aaPredicted RBP22.1■■□□□ 1.13
HMGA2-203ENST00000393578 COMMD10Q9Y6G5 202 aa22.1■■□□□ 1.13
HMGA2-203ENST00000393578 BNIP3LO60238 219 aa22.09■■□□□ 1.13
HMGA2-203ENST00000393578 IPO13O94829 963 aaKnown RBP22.09■■□□□ 1.13
HMGA2-203ENST00000393578 CBX6O95503 412 aa22.09■■□□□ 1.13
HMGA2-203ENST00000393578 CHRNGP07510 517 aa22.09■■□□□ 1.13
HMGA2-203ENST00000393578 BMP1P13497 986 aa22.09■■□□□ 1.13
HMGA2-203ENST00000393578 PKMP14618 531 aaKnown RBP22.09■■□□□ 1.13
HMGA2-203ENST00000393578 PRKAA1Q13131 559 aa22.09■■□□□ 1.13
HMGA2-203ENST00000393578 KCNC3Q14003 757 aa22.09■■□□□ 1.13
HMGA2-203ENST00000393578 TRIM67Q6ZTA4 783 aa22.09■■□□□ 1.13
HMGA2-203ENST00000393578 TAS2R42Q7RTR8 314 aa22.09■■□□□ 1.13
HMGA2-203ENST00000393578 TTC7BQ86TV6 843 aa22.09■■□□□ 1.13
HMGA2-203ENST00000393578 SLC22A9Q8IVM8 553 aa22.09■■□□□ 1.13
HMGA2-203ENST00000393578 SCRN2Q96FV2 425 aa22.09■■□□□ 1.13
HMGA2-203ENST00000393578 ALG9Q9H6U8 611 aa22.09■■□□□ 1.13
HMGA2-203ENST00000393578 ARHGEF3Q9NR81 526 aa22.09■■□□□ 1.13
HMGA2-203ENST00000393578 APPL1Q9UKG1 709 aa22.09■■□□□ 1.13
HMGA2-203ENST00000393578 ERVW-1Q9UQF0 538 aa22.09■■□□□ 1.13
HMGA2-203ENST00000393578 APOBEC2Q9Y235 224 aaKnown RBP22.09■■□□□ 1.13
HMGA2-203ENST00000393578 TRANK1O15050 2925 aa22.09■■□□□ 1.13
HMGA2-203ENST00000393578 F8W8V4 182 aa22.08■■□□□ 1.13
HMGA2-203ENST00000393578 CLDN7O95471 211 aa22.08■■□□□ 1.13
HMGA2-203ENST00000393578 CYP17A1P05093 508 aa22.08■■□□□ 1.13
HMGA2-203ENST00000393578 PYGLP06737 847 aa22.08■■□□□ 1.13
HMGA2-203ENST00000393578 SERPINA6P08185 405 aa22.08■■□□□ 1.13
HMGA2-203ENST00000393578 IDH3AP50213 366 aa22.08■■□□□ 1.13
HMGA2-203ENST00000393578 CCNYL1Q8N7R7 359 aa22.08■■□□□ 1.13
HMGA2-203ENST00000393578 MOCOSQ96EN8 888 aa22.08■■□□□ 1.13
HMGA2-203ENST00000393578 LRMDAQ9H2I8 198 aa22.08■■□□□ 1.13
HMGA2-203ENST00000393578 ZDHHC6Q9H6R6 413 aa22.08■■□□□ 1.13
HMGA2-203ENST00000393578 SLC40A1Q9NP59 571 aa22.08■■□□□ 1.13
HMGA2-203ENST00000393578 FAM50BQ9Y247 325 aa22.08■■□□□ 1.13
HMGA2-203ENST00000393578 OAS3Q9Y6K5 1087 aaKnown RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms