RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 DDHD1Q8NEL9 900 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 IL26Q9NPH9 171 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 VPS18Q9P253 973 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 PKP3Q9Y446 797 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 KLHL33A6NCF5 533 aa13.21□□□□□ -0.29
USP44-202ENST00000393091 PRR19A6NJB7 356 aa13.21□□□□□ -0.29
USP44-202ENST00000393091 VILLO15195 856 aa13.21□□□□□ -0.29
USP44-202ENST00000393091 MMP20O60882 483 aa13.21□□□□□ -0.29
USP44-202ENST00000393091 USP12O75317 370 aa13.21□□□□□ -0.29
USP44-202ENST00000393091 SLC7A5Q01650 507 aa13.21□□□□□ -0.29
USP44-202ENST00000393091 DHX9Q08211 1270 aaKnown RBP13.21□□□□□ -0.29
USP44-202ENST00000393091 SYCP2LQ5T4T6 812 aa13.21□□□□□ -0.29
USP44-202ENST00000393091 SEL1L3Q68CR1 1132 aa13.21□□□□□ -0.29
USP44-202ENST00000393091 AFTPHQ6ULP2 937 aa13.21□□□□□ -0.29
USP44-202ENST00000393091 PGBD3Q8N328 593 aa13.21□□□□□ -0.29
USP44-202ENST00000393091 MREGQ8N565 214 aa13.21□□□□□ -0.29
USP44-202ENST00000393091 CAVIN3Q969G5 261 aa13.21□□□□□ -0.29
USP44-202ENST00000393091 STAMBPL1Q96FJ0 436 aa13.21□□□□□ -0.29
USP44-202ENST00000393091 CDKN2AIPNLQ96HQ2 116 aa13.21□□□□□ -0.29
USP44-202ENST00000393091 TTC25Q96NG3 672 aa13.21□□□□□ -0.29
USP44-202ENST00000393091 TCF12Q99081 682 aa13.21□□□□□ -0.29
USP44-202ENST00000393091 GPR174Q9BXC1 333 aa13.21□□□□□ -0.29
USP44-202ENST00000393091 RMI1Q9H9A7 625 aa13.21□□□□□ -0.29
USP44-202ENST00000393091 ARL5AQ9Y689 179 aa13.21□□□□□ -0.29
USP44-202ENST00000393091 OGNP20774 298 aaKnown RBP13.21□□□□□ -0.3
USP44-202ENST00000393091 FOXN2P32314 431 aa13.21□□□□□ -0.3
USP44-202ENST00000393091 IGFALSP35858 605 aa13.21□□□□□ -0.3
USP44-202ENST00000393091 CLCNKAP51800 687 aa13.21□□□□□ -0.3
USP44-202ENST00000393091 ITGA9Q13797 1035 aa13.21□□□□□ -0.3
USP44-202ENST00000393091 SLMAPQ14BN4 828 aa13.21□□□□□ -0.3
USP44-202ENST00000393091 LRRC14Q15048 493 aa13.21□□□□□ -0.3
USP44-202ENST00000393091 ANKRD20A4Q4UJ75 823 aa13.21□□□□□ -0.3
USP44-202ENST00000393091 SNX20Q7Z614 316 aa13.21□□□□□ -0.3
USP44-202ENST00000393091 GPR63Q9BZJ6 419 aa13.21□□□□□ -0.3
USP44-202ENST00000393091 FAM83DQ9H4H8 585 aa13.21□□□□□ -0.3
USP44-202ENST00000393091 MTRF1LQ9UGC7 380 aaKnown RBP13.21□□□□□ -0.3
USP44-202ENST00000393091 SUSD2Q9UGT4 822 aa13.21□□□□□ -0.3
USP44-202ENST00000393091 RABIFP47224 123 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 RPL6Q02878 288 aaKnown RBP13.2□□□□□ -0.3
USP44-202ENST00000393091 CACNG1Q06432 222 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 IRF4Q15306 451 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 TRADDQ15628 312 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 SLC23A3Q6PIS1 610 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 DNAAF3Q8N9W5 541 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 PDCD6IPQ8WUM4 868 aaKnown RBP13.2□□□□□ -0.3
USP44-202ENST00000393091 BMFQ96LC9 184 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 TMEM131Q92545 1883 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 TBC1D3DA0A087WVF3 549 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 TBC1D3IA0A087WXS9 549 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 TBC1D3EA0A087X179 549 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 TBC1D3KA0A087X1G2 549 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 TBC1D3FA6NER0 549 aaPredicted RBP13.2□□□□□ -0.3
USP44-202ENST00000393091 A6NNZ2 444 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 TBC1D3LB9A6J9 549 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 MAGEC1O60732 1142 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 POLBP06746 335 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 TBC1D3HP0C7X1 549 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 RPS3P23396 243 aaKnown RBP eCLIP13.2□□□□□ -0.3
USP44-202ENST00000393091 VPS41P49754 854 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 ITIH4Q14624 930 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 ZNF658BQ4V348 819 aaPredicted RBP13.2□□□□□ -0.3
USP44-202ENST00000393091 TBC1D3GQ6DHY5 549 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 TBC1D3CQ6IPX1 549 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 CERS6Q6ZMG9 384 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 TRMT10CQ7L0Y3 403 aaKnown RBP13.2□□□□□ -0.3
USP44-202ENST00000393091 TBC1D3Q8IZP1 549 aaPredicted RBP13.2□□□□□ -0.3
USP44-202ENST00000393091 AENQ8WTP8 325 aaKnown RBP13.2□□□□□ -0.3
USP44-202ENST00000393091 SMIM14Q96QK8 99 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 TMPRSS11EQ9UL52 423 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 DNMT3AQ9Y6K1 912 aaPredicted RBP13.2□□□□□ -0.3
USP44-202ENST00000393091 PAMP19021 973 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 ETV3P41162 512 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 CARSP49589 748 aaKnown RBP13.2□□□□□ -0.3
USP44-202ENST00000393091 ELF2Q15723 593 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 FAM182AQ5T1J6 154 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 KIAA0408Q6ZU52 694 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 FRMD1Q8N878 549 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 BLOC1S5Q8TDH9 187 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 FCRL3Q96P31 734 aaPredicted RBP13.2□□□□□ -0.3
USP44-202ENST00000393091 DPH5Q9H2P9 285 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 LATS2Q9NRM7 1088 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 SLC17A4Q9Y2C5 497 aa13.2□□□□□ -0.3
USP44-202ENST00000393091 CACNA1IQ9P0X4 2223 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 DOCK9Q9BZ29 2069 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 AVILO75366 819 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 MYCLP1P12525 358 aaPredicted RBP13.19□□□□□ -0.3
USP44-202ENST00000393091 SGCGQ13326 291 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 PTPRRQ15256 657 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 LDLRAP1Q5SW96 308 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 LYSMD4Q5XG99 296 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 SLC26A11Q86WA9 606 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 LRRC6Q86X45 466 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 SYT12Q8IV01 421 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 IGDCC3Q8IVU1 814 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 SDR16C5Q8N3Y7 309 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 OR4K2Q8NGD2 314 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 BTN2A2Q8WVV5 523 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 LINC00615Q96LM1 132 aaPredicted RBP13.19□□□□□ -0.3
USP44-202ENST00000393091 FMO2Q99518 471 aa13.19□□□□□ -0.3
USP44-202ENST00000393091 APOL2Q9BQE5 337 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms