RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 ATOH8Q96SQ7 321 aa25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 CCDC68Q9H2F9 335 aa25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 TAS2R13Q9NYV9 303 aa25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 LTBP2Q14767 1821 aa25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 CCDC189A1A4V9 331 aa25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 SPATA31D3P0C874 917 aa25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 MTHFD2P13995 350 aa25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 LAG3P18627 525 aa25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 INHBCP55103 352 aa25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 EML3Q32P44 896 aa25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 INO80DQ53TQ3 878 aaPredicted RBP25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 CLEC6AQ6EIG7 209 aa25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 SPATA31D4Q6ZUB0 917 aa25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 PIANPQ8IYJ0 282 aa25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 PPFIBP2Q8ND30 876 aa25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 WFDC5Q8TCV5 224 aa25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 DIS3LQ8TF46 1054 aaKnown RBP25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 TMA16Q96EY4 203 aaKnown RBP25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 SYTL2Q9HCH5 934 aa25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 BPIFA1Q9NP55 256 aa25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 NDE1Q9NXR1 346 aa25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 VPS51Q9UID3 782 aa25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 PRPF19Q9UMS4 504 aaKnown RBP25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 FCF1Q9Y324 198 aaKnown RBP25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 CPQQ9Y646 472 aa25.53■■□□□ 1.68
SMARCD3-203ENST00000392811 ABHD14A-ACY1A0A1B0GW23 586 aa25.52■■□□□ 1.68
SMARCD3-203ENST00000392811 GFRA2O00451 464 aa25.52■■□□□ 1.68
SMARCD3-203ENST00000392811 BAG2O95816 211 aa25.52■■□□□ 1.68
SMARCD3-203ENST00000392811 HDCP19113 662 aa25.52■■□□□ 1.68
SMARCD3-203ENST00000392811 MC4RP32245 332 aa25.52■■□□□ 1.68
SMARCD3-203ENST00000392811 CSKP41240 450 aa25.52■■□□□ 1.68
SMARCD3-203ENST00000392811 PSAPL1Q6NUJ1 521 aa25.52■■□□□ 1.68
SMARCD3-203ENST00000392811 Q6ZNB5 142 aa25.52■■□□□ 1.68
SMARCD3-203ENST00000392811 TTC30BQ8N4P2 665 aa25.52■■□□□ 1.68
SMARCD3-203ENST00000392811 PYDC1Q8WXC3 89 aa25.52■■□□□ 1.68
SMARCD3-203ENST00000392811 OBSL1O75147 1896 aa25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 A0A0U1RQS6 177 aa25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 SIX3O95343 332 aaPredicted RBP25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 OLFM2O95897 454 aa25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 CDH13P55290 713 aa25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 RHOAP61586 193 aa25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 PPP1R3AQ16821 1122 aa25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 PTPRNQ16849 979 aa25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 PFKFB4Q16877 469 aa25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 TTC16Q8NEE8 873 aa25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 SLC26A7Q8TE54 656 aa25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 JADE3Q92613 823 aa25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 BHMTQ93088 406 aa25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 ALG14Q96F25 216 aa25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 MRPL17Q9NRX2 175 aaKnown RBP25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 LRRC14BA6NHZ5 514 aa25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 STX7O15400 261 aaKnown RBP25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 TEX28O15482 410 aa25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 MAP3K7O43318 606 aa25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 CDH18Q13634 790 aa25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 ATXN7L2Q5T6C5 722 aaPredicted RBP25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 C1orf53Q5VUE5 145 aa25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 KIAA1191Q96A73 305 aa25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 BIRC8Q96P09 236 aa25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 GPR21Q99679 349 aa25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 DERL2Q9GZP9 239 aa25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 PACSIN3Q9UKS6 424 aa25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 IKZF3Q9UKT9 509 aa25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 FNDC3AQ9Y2H6 1198 aaKnown RBP25.51■■□□□ 1.67
SMARCD3-203ENST00000392811 GBF1Q92538 1859 aa25.5■■□□□ 1.67
SMARCD3-203ENST00000392811 TYW5A2RUC4 315 aaKnown RBP25.5■■□□□ 1.67
SMARCD3-203ENST00000392811 RFC2P35250 354 aa25.5■■□□□ 1.67
SMARCD3-203ENST00000392811 CYHR1Q6ZMK1 362 aa25.5■■□□□ 1.67
SMARCD3-203ENST00000392811 RAB44Q7Z6P3 723 aaPredicted RBP25.5■■□□□ 1.67
SMARCD3-203ENST00000392811 ITIH5Q86UX2 942 aa25.5■■□□□ 1.67
SMARCD3-203ENST00000392811 KIRREL3Q8IZU9 778 aa25.5■■□□□ 1.67
SMARCD3-203ENST00000392811 EFCAB1Q9HAE3 211 aa25.5■■□□□ 1.67
SMARCD3-203ENST00000392811 GALPQ9UBC7 116 aa25.5■■□□□ 1.67
SMARCD3-203ENST00000392811 OAS3Q9Y6K5 1087 aaKnown RBP25.5■■□□□ 1.67
SMARCD3-203ENST00000392811 LCHNA4D1U4 455 aa25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 KERAO60938 352 aa25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 MT-CO1P00395 513 aa25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 HSPA1AP0DMV8 641 aaKnown RBP25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 HSPA1BP0DMV9 641 aaKnown RBP25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 RAD51Q06609 339 aa25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 PABPC1LQ4VXU2 614 aaKnown RBP25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 BNC2Q6ZN30 1099 aaPredicted RBP25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 GK5Q6ZS86 529 aa25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 KBTBD2Q8IY47 623 aa25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 CMTR2Q8IYT2 770 aaKnown RBP25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 HIPK4Q8NE63 616 aa25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 DNMT3BQ9UBC3 853 aaKnown RBP25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 VPS9D1Q9Y2B5 631 aa25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 PCDHB9Q9Y5E1 797 aa25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 UBDO15205 165 aa25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 FZD6O60353 706 aa25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 OR1I1O60431 355 aa25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 TTPAP49638 278 aa25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 SH3BP2P78314 561 aa25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 ZRANB3Q5FWF4 1079 aa25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 ADGRG6Q86SQ4 1221 aa25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 PGAM4Q8N0Y7 254 aa25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 HMGCLL1Q8TB92 370 aa25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 STAG3L4Q8TBR4 150 aa25.49■■□□□ 1.67
SMARCD3-203ENST00000392811 CDRT15Q96T59 188 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms