RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 ICAM3P32942 547 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 ZNF605Q86T29 641 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 SLC22A16Q86VW1 577 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 KLHL32Q96NJ5 620 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 CINPQ9BW66 212 aaPredicted RBP14.23□□□□□ -0.13
RTF1-201ENST00000389629 C20orf27Q9GZN8 174 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 GLOD4Q9HC38 313 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 MKS1Q9NXB0 559 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 STMN3Q9NZ72 180 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 SPATA7Q9P0W8 599 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 TMED5Q9Y3A6 229 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.23□□□□□ -0.13
RTF1-201ENST00000389629 LOC110117498-PIK3R3F6TDL0 507 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 DPYSL4O14531 572 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 TP73O15350 636 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 NDUFB5O43674 189 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 SOAT1P35610 550 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 ARHGEF7Q14155 803 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 FGD3Q5JSP0 725 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 DGKKQ5KSL6 1271 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 LUZP2Q86TE4 346 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 FAM35AQ86V20 835 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 REEP1Q9H902 201 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 SUCOQ9UBS9 1254 aaKnown RBP14.23□□□□□ -0.13
RTF1-201ENST00000389629 VPS51Q9UID3 782 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 IL7RP16871 459 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 PPP3CCP48454 512 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 TRAP1Q12931 704 aaKnown RBP14.23□□□□□ -0.13
RTF1-201ENST00000389629 TRIQKQ629K1 86 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 TPK1Q9H3S4 243 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 MROH8Q9H579 483 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 MOCS1Q9NZB8 636 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 MTRRQ9UBK8 725 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 DOT1LQ8TEK3 1739 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 SH3BGRLO75368 114 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 FUT4P22083 530 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 AZGP1P25311 298 aaKnown RBP14.23□□□□□ -0.13
RTF1-201ENST00000389629 SLC26A3P40879 764 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 SLC10A2Q12908 348 aaPredicted RBP14.23□□□□□ -0.13
RTF1-201ENST00000389629 ZNF621Q6ZSS3 439 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 TLK2Q86UE8 772 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 VPS37AQ8NEZ2 397 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 SLC47A1Q96FL8 570 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 REXO5Q96IC2 774 aaKnown RBP14.23□□□□□ -0.13
RTF1-201ENST00000389629 ANKRD33BA6NCL7 494 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 SLC22A2O15244 555 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 HCRTO43612 131 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 HERC3Q15034 1050 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 PSMD5Q16401 504 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 CYP2A13Q16696 494 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 HECTD2Q5U5R9 776 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 AHSA2Q719I0 299 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 GPSM1Q86YR5 675 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 TTC30BQ8N4P2 665 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 ATP6V0D2Q8N8Y2 350 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 LEMD2Q8NC56 503 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 FBRSL1Q9HCM7 1045 aaKnown RBP14.22□□□□□ -0.13
RTF1-201ENST00000389629 CD320Q9NPF0 282 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 ZDHHC7Q9NXF8 308 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 BCKDKO14874 412 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 PIP5K1BO14986 540 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 ABCB1P08183 1280 aaPredicted RBP14.22□□□□□ -0.13
RTF1-201ENST00000389629 GRK3P35626 688 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 GLUD2P49448 558 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 RPL38P63173 70 aaKnown RBP14.22□□□□□ -0.13
RTF1-201ENST00000389629 TREML2Q5T2D2 321 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 ZNF772Q68DY9 489 aaPredicted RBP14.22□□□□□ -0.13
RTF1-201ENST00000389629 ARHGAP17Q68EM7 881 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 TYW3Q6IPR3 259 aaKnown RBP14.22□□□□□ -0.13
RTF1-201ENST00000389629 ERMP1Q7Z2K6 904 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 SUN5Q8TC36 379 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 MAPK15Q8TD08 544 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 COLEC11Q9BWP8 271 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 MAGEL2Q9UJ55 1249 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 ZNF112Q9UJU3 913 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 TBC1D30Q9Y2I9 924 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 COL18A1P39060 1754 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 PRR23D1E9PI22 279 aaPredicted RBP14.22□□□□□ -0.13
RTF1-201ENST00000389629 PRR23D2P0DMB1 279 aaPredicted RBP14.22□□□□□ -0.13
RTF1-201ENST00000389629 CLDN10P78369 228 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 KIAA1841Q6NSI8 718 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 FAM45AQ8TCE6 357 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 SEPT5Q99719 369 aaPredicted RBP14.22□□□□□ -0.13
RTF1-201ENST00000389629 TRMOQ9BU70 441 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 FTHL17Q9BXU8 183 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 ELOVL6Q9H5J4 265 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 MPP6Q9NZW5 540 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 KLQ9UEF7 1012 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 VPS9D1Q9Y2B5 631 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 KLHL20Q9Y2M5 609 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 ANKRD12Q6UB98 2062 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 FAM25AB3EWG3 89 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 FAM25CB3EWG5 89 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 FAM25GB3EWG6 89 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 ARPC2O15144 300 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 PGLSO95336 258 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 CNPP09543 421 aaKnown RBP14.22□□□□□ -0.13
RTF1-201ENST00000389629 MAGEA10P43363 369 aaPredicted RBP14.22□□□□□ -0.13
RTF1-201ENST00000389629 COLEC12Q5KU26 742 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 PROSER1Q86XN7 944 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms