RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 HNRNPRO43390 633 aaKnown RBP0.85□□□□□ -2.27
SNORA40-201ENST00000388090 KLK8O60259 260 aa0.85□□□□□ -2.27
SNORA40-201ENST00000388090 ACADMP11310 421 aa0.85□□□□□ -2.27
SNORA40-201ENST00000388090 G6PDP11413 515 aa0.85□□□□□ -2.27
SNORA40-201ENST00000388090 MGMTP16455 207 aa0.85□□□□□ -2.27
SNORA40-201ENST00000388090 ZNF32P17041 273 aa0.85□□□□□ -2.27
SNORA40-201ENST00000388090 CD58P19256 250 aa0.85□□□□□ -2.27
SNORA40-201ENST00000388090 MSH3P20585 1137 aa0.85□□□□□ -2.27
SNORA40-201ENST00000388090 ITGA3P26006 1051 aa0.85□□□□□ -2.27
SNORA40-201ENST00000388090 STT3AP46977 705 aa0.85□□□□□ -2.27
SNORA40-201ENST00000388090 ARCN1P48444 511 aaKnown RBP0.85□□□□□ -2.27
SNORA40-201ENST00000388090 LYZP61626 148 aa0.85□□□□□ -2.27
SNORA40-201ENST00000388090 BYSLQ13895 437 aaKnown RBP0.85□□□□□ -2.27
SNORA40-201ENST00000388090 GALEQ14376 348 aa0.85□□□□□ -2.27
SNORA40-201ENST00000388090 KIR2DS3Q14952 304 aa0.85□□□□□ -2.27
SNORA40-201ENST00000388090 HSPB2Q16082 182 aa0.85□□□□□ -2.27
SNORA40-201ENST00000388090 LRRC24Q50LG9 513 aa0.85□□□□□ -2.27
SNORA40-201ENST00000388090 IL27RAQ6UWB1 636 aa0.85□□□□□ -2.27
SNORA40-201ENST00000388090 GJC3Q8NFK1 279 aa0.85□□□□□ -2.27
SNORA40-201ENST00000388090 ZNF285Q96NJ3 590 aa0.85□□□□□ -2.27
SNORA40-201ENST00000388090 PSD2Q9BQI7 771 aa0.85□□□□□ -2.27
SNORA40-201ENST00000388090 SLITRK2Q9H156 845 aa0.85□□□□□ -2.27
SNORA40-201ENST00000388090 IFT80Q9P2H3 777 aaPredicted RBP0.85□□□□□ -2.27
SNORA40-201ENST00000388090 LRWD1Q9UFC0 647 aa0.85□□□□□ -2.27
SNORA40-201ENST00000388090 LIMA1Q9UHB6 759 aaKnown RBP0.85□□□□□ -2.27
SNORA40-201ENST00000388090 SLC6A5Q9Y345 797 aa0.85□□□□□ -2.27
SNORA40-201ENST00000388090 JRKLQ9Y4A0 524 aa0.85□□□□□ -2.27
SNORA40-201ENST00000388090 OTOGLQ3ZCN5 2332 aa0.84□□□□□ -2.27
SNORA40-201ENST00000388090 FBN3Q75N90 2809 aa0.84□□□□□ -2.27
SNORA40-201ENST00000388090 HCFC1P51610 2035 aa0.84□□□□□ -2.27
SNORA40-201ENST00000388090 TYW5A2RUC4 315 aaKnown RBP0.84□□□□□ -2.27
SNORA40-201ENST00000388090 C5orf60A6NFR6 353 aa0.84□□□□□ -2.27
SNORA40-201ENST00000388090 CBY3A6NI87 242 aa0.84□□□□□ -2.27
SNORA40-201ENST00000388090 RAF1P04049 648 aa0.84□□□□□ -2.27
SNORA40-201ENST00000388090 U2AF1L5P0DN76 240 aaPredicted RBP0.84□□□□□ -2.27
SNORA40-201ENST00000388090 CSF2RAP15509 400 aa0.84□□□□□ -2.27
SNORA40-201ENST00000388090 POLR2CP19387 275 aaPredicted RBP0.84□□□□□ -2.27
SNORA40-201ENST00000388090 CD72P21854 359 aa0.84□□□□□ -2.27
SNORA40-201ENST00000388090 RRM1P23921 792 aa0.84□□□□□ -2.27
SNORA40-201ENST00000388090 RBMS1P29558 406 aaKnown RBP0.84□□□□□ -2.27
SNORA40-201ENST00000388090 AHRP35869 848 aa0.84□□□□□ -2.27
SNORA40-201ENST00000388090 U2AF1Q01081 240 aaKnown RBP eCLIP0.84□□□□□ -2.27
SNORA40-201ENST00000388090 PMS2P11Q13670 270 aa0.84□□□□□ -2.27
SNORA40-201ENST00000388090 GRM3Q14832 879 aa0.84□□□□□ -2.27
SNORA40-201ENST00000388090 NECTIN1Q15223 517 aa0.84□□□□□ -2.27
SNORA40-201ENST00000388090 PNLIPRP3Q17RR3 467 aa0.84□□□□□ -2.27
SNORA40-201ENST00000388090 SLC35G1Q2M3R5 365 aa0.84□□□□□ -2.27
SNORA40-201ENST00000388090 EIF2S3LQ2VIR3 472 aaKnown RBP0.84□□□□□ -2.27
SNORA40-201ENST00000388090 GALNTL6Q49A17 601 aa0.84□□□□□ -2.27
SNORA40-201ENST00000388090 HIGD2BQ4VC39 106 aa0.84□□□□□ -2.27
SNORA40-201ENST00000388090 FHL5Q5TD97 284 aa0.84□□□□□ -2.27
SNORA40-201ENST00000388090 PPP4R4Q6NUP7 873 aa0.84□□□□□ -2.27
SNORA40-201ENST00000388090 PIWIL4Q7Z3Z4 852 aaKnown RBP0.84□□□□□ -2.27
SNORA40-201ENST00000388090 ADSSL1Q8N142 457 aa0.84□□□□□ -2.27
SNORA40-201ENST00000388090 PTGR2Q8N8N7 351 aaPredicted RBP0.84□□□□□ -2.27
SNORA40-201ENST00000388090 IPO4Q8TEX9 1081 aaKnown RBP0.84□□□□□ -2.27
SNORA40-201ENST00000388090 GTF3AQ92664 365 aaKnown RBP0.84□□□□□ -2.27
SNORA40-201ENST00000388090 PUS3Q9BZE2 481 aaKnown RBP0.84□□□□□ -2.27
SNORA40-201ENST00000388090 ZBTB20Q9HC78 741 aaPredicted RBP0.84□□□□□ -2.27
SNORA40-201ENST00000388090 MKKSQ9NPJ1 570 aaPredicted RBP0.84□□□□□ -2.27
SNORA40-201ENST00000388090 DDX4Q9NQI0 724 aaKnown RBP0.84□□□□□ -2.27
SNORA40-201ENST00000388090 RCOR1Q9UKL0 485 aa0.84□□□□□ -2.27
SNORA40-201ENST00000388090 IGHV4-4A0A075B6R2 117 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 PIP5K1BO14986 540 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 EIF3DO15371 548 aaKnown RBP eCLIP0.83□□□□□ -2.28
SNORA40-201ENST00000388090 ZNF354AO60765 605 aaPredicted RBP0.83□□□□□ -2.28
SNORA40-201ENST00000388090 MTA2O94776 668 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 AP2A2O94973 939 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 METTL18O95568 372 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 ZSCAN5DPP0CG00 497 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 FOLR2P14207 255 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 ZNF23P17027 643 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 BCL3P20749 454 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 BDKRB2P30411 391 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 KCNJ10P78508 379 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 ARHGAP8P85298 464 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 SP3Q02447 781 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 PAX8Q06710 450 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 NFATC2Q13469 925 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 GTDC1Q4AE62 458 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 TMEM35AQ53FP2 167 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 TTI2Q6NXR4 508 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 GJB7Q6PEY0 223 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 KCTD18Q6PI47 426 aaPredicted RBP0.83□□□□□ -2.28
SNORA40-201ENST00000388090 RASGRP2Q7LDG7 609 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 SCCPDHQ8NBX0 429 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 KLHL30-AS1Q8NEE0 82 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 OR5R1Q8NH85 324 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 RTP3Q9BQQ7 232 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 RTBDNQ9BSG5 229 aaPredicted RBP0.83□□□□□ -2.28
SNORA40-201ENST00000388090 PANK3Q9H999 370 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 MMP25Q9NPA2 562 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 PCDH12Q9NPG4 1184 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 TM7SF3Q9NS93 570 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 ZNF107Q9UII5 783 aaPredicted RBP0.83□□□□□ -2.28
SNORA40-201ENST00000388090 TUBE1Q9UJT0 475 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 NOB1Q9ULX3 412 aaKnown RBP0.83□□□□□ -2.28
SNORA40-201ENST00000388090 STON1Q9Y6Q2 735 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 PTPRCP08575 1304 aa0.83□□□□□ -2.28
SNORA40-201ENST00000388090 FLT1P17948 1338 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms