RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 LIPEQ05469 1076 aa14.97□□□□□ -0.01
CTNS-202ENST00000381870 DAG1Q14118 895 aa14.97□□□□□ -0.01
CTNS-202ENST00000381870 KCTD11Q693B1 232 aa14.97□□□□□ -0.01
CTNS-202ENST00000381870 LAIR2Q6ISS4 152 aa14.97□□□□□ -0.01
CTNS-202ENST00000381870 TAF2Q6P1X5 1199 aa14.97□□□□□ -0.01
CTNS-202ENST00000381870 STK32CQ86UX6 486 aa14.97□□□□□ -0.01
CTNS-202ENST00000381870 LRRC49Q8IUZ0 686 aa14.97□□□□□ -0.01
CTNS-202ENST00000381870 LEMD2Q8NC56 503 aa14.97□□□□□ -0.01
CTNS-202ENST00000381870 KCTD14Q9BQ13 255 aaPredicted RBP14.97□□□□□ -0.01
CTNS-202ENST00000381870 MIR1-1HGQ9H1L0 117 aa14.97□□□□□ -0.01
CTNS-202ENST00000381870 RPF1Q9H9Y2 349 aaKnown RBP14.97□□□□□ -0.01
CTNS-202ENST00000381870 CYP3A43Q9HB55 503 aa14.97□□□□□ -0.01
CTNS-202ENST00000381870 RNF146Q9NTX7 359 aa14.97□□□□□ -0.01
CTNS-202ENST00000381870 TESMINQ9Y4I5 508 aa14.97□□□□□ -0.01
CTNS-202ENST00000381870 CTDP1Q9Y5B0 961 aaPredicted RBP14.97□□□□□ -0.01
CTNS-202ENST00000381870 SNX5Q9Y5X3 404 aa14.97□□□□□ -0.01
CTNS-202ENST00000381870 SYNJ2BP-COX16A0A087WUM0 186 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 YDJCA8MPS7 323 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 TTC34A8MYJ7 566 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 UPK1AO00322 258 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 MGEA5O60502 916 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 IPO13O94829 963 aaKnown RBP14.96□□□□□ -0.01
CTNS-202ENST00000381870 GABARAPO95166 117 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 EFNA5P52803 228 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 PHC1P78364 1004 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 AASDHQ4L235 1098 aaPredicted RBP14.96□□□□□ -0.01
CTNS-202ENST00000381870 PAGE2Q7Z2X7 111 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 ACOT1Q86TX2 421 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 LYSMD2Q8IV50 215 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 OSCP1Q8WVF1 389 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 TMBIM1Q969X1 311 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 C19orf60Q96EN9 201 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 TMEM74Q96NL1 305 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 DACH2Q96NX9 599 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 BDH2Q9BUT1 245 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 NT5C1AQ9BXI3 368 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 C2orf40Q9H1Z8 148 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 SP140LQ9H930 580 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 IGSF5Q9NSI5 407 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 EXD2Q9NVH0 621 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 COX16Q9P0S2 106 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 CARD8Q9Y2G2 431 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 ZNF638Q14966 1978 aaKnown RBP14.96□□□□□ -0.01
CTNS-202ENST00000381870 UBR3Q6ZT12 1888 aa14.96□□□□□ -0.01
CTNS-202ENST00000381870 ZNF99A8MXY4 864 aaPredicted RBP14.95□□□□□ -0.02
CTNS-202ENST00000381870 AP3B1O00203 1094 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 PCNAP12004 261 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 ITIH1P19827 911 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 CYP2B6P20813 491 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 TGFBR1P36897 503 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 PIGAP37287 484 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 LAMTOR4Q0VGL1 99 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 GRB7Q14451 532 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 PKDCCQ504Y2 493 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 ATF7IP2Q5U623 682 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 ANKRD34AQ69YU3 496 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 XRRA1Q6P2D8 792 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 RBM23Q86U06 439 aaKnown RBP14.95□□□□□ -0.02
CTNS-202ENST00000381870 LRRC71Q8N4P6 559 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 OR13J1Q8NGT2 312 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 RNF139Q8WU17 664 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 SLC35F5Q8WV83 523 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.95□□□□□ -0.02
CTNS-202ENST00000381870 UBXN10Q96LJ8 280 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 NIFKQ9BYG3 293 aaKnown RBP14.95□□□□□ -0.02
CTNS-202ENST00000381870 TMEM39BQ9GZU3 492 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 SMURF2Q9HAU4 748 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 DSEQ9UL01 958 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 FZD10Q9ULW2 581 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 ANK1P16157 1881 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 SEC24AO95486 1093 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 LCP1P13796 627 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 EIF2DP41214 584 aaKnown RBP14.95□□□□□ -0.02
CTNS-202ENST00000381870 PPP5CP53041 499 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 NCS1P62166 190 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 CD47Q08722 323 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 CCDC58Q4VC31 144 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 LINC00299Q6ZSB3 139 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 NLGN1Q8N2Q7 840 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 POC5Q8NA72 575 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 DYNC2LI1Q8TCX1 351 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 NODALQ96S42 347 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 GSTO2Q9H4Y5 243 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 CDHR5Q9HBB8 845 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 PTPRHQ9HD43 1115 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 SETD4Q9NVD3 440 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 FAM118AQ9NWS6 357 aa14.95□□□□□ -0.02
CTNS-202ENST00000381870 H3BMM5 538 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 M0QX08 132 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 TNPO2O14787 897 aaKnown RBP14.94□□□□□ -0.02
CTNS-202ENST00000381870 SLC22A1O15245 554 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 IDH3BO43837 385 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 GSNP06396 782 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 GJB1P08034 283 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 HRH2P25021 359 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 SERPINB10P48595 397 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 NPY2RP49146 381 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 IST1P53990 364 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 FKBP1AP62942 108 aaKnown RBP14.94□□□□□ -0.02
CTNS-202ENST00000381870 VAC14Q08AM6 782 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms