RNA–Protein interactions for RNA: ENST00000380962.9

LCMT1-201, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 1,529 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-201ENST00000380962 SUPT7LO94864 414 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 C1RP00736 705 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 SLC4A1P02730 911 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 URODP06132 367 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 PFKLP17858 780 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 CSNK1DP48730 415 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 MRPL19P49406 292 aaKnown RBP13.3□□□□□ -0.28
LCMT1-201ENST00000380962 CCL23P55773 120 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 ARF5P84085 180 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 ZNF423Q2M1K9 1284 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 TMEM198Q66K66 360 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 ANO7Q6IWH7 933 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.3□□□□□ -0.289e-8■□□□□ 9.5
LCMT1-201ENST00000380962 Q6ZNB5 142 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 DDX53Q86TM3 631 aaKnown RBP13.3□□□□□ -0.28
LCMT1-201ENST00000380962 PIM3Q86V86 326 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 HPS6Q86YV9 775 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 HOMEZQ8IX15 550 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 CMTR2Q8IYT2 770 aaKnown RBP13.3□□□□□ -0.28
LCMT1-201ENST00000380962 TTC30BQ8N4P2 665 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 CHCHD4Q8N4Q1 142 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 PTGR2Q8N8N7 351 aaPredicted RBP13.3□□□□□ -0.28
LCMT1-201ENST00000380962 MDGA1Q8NFP4 955 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 SLC26A7Q8TE54 656 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 ZFRQ96KR1 1074 aaKnown RBP13.3□□□□□ -0.28
LCMT1-201ENST00000380962 SLC25A23Q9BV35 468 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 MRPL1Q9BYD6 325 aaKnown RBP13.3□□□□□ -0.28
LCMT1-201ENST00000380962 SHCBP1LQ9BZQ2 653 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 UNKQ9C0B0 810 aaKnown RBP13.3□□□□□ -0.28
LCMT1-201ENST00000380962 RNF38Q9H0F5 515 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 WDR41Q9HAD4 459 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 RC3H2Q9HBD1 1191 aaKnown RBP13.3□□□□□ -0.28
LCMT1-201ENST00000380962 C6orf203Q9P0P8 240 aaPredicted RBP13.3□□□□□ -0.28
LCMT1-201ENST00000380962 TRIM17Q9Y577 477 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 OR51B4Q9Y5P0 310 aa13.3□□□□□ -0.28
LCMT1-201ENST00000380962 KIAA1671Q9BY89 1806 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 TMEM233B4DJY2 109 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 PSMD12O00232 456 aaPredicted RBP13.29□□□□□ -0.28
LCMT1-201ENST00000380962 STX7O15400 261 aaKnown RBP13.29□□□□□ -0.28
LCMT1-201ENST00000380962 KLK8O60259 260 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 FZD6O60353 706 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 SRP72O76094 671 aaKnown RBP13.29□□□□□ -0.28
LCMT1-201ENST00000380962 CD160O95971 181 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 ESR1P03372 595 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 MBL2P11226 248 aaPredicted RBP13.29□□□□□ -0.28
LCMT1-201ENST00000380962 MTHFD2P13995 350 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 PKMP14618 531 aaKnown RBP13.29□□□□□ -0.28
LCMT1-201ENST00000380962 ME2P23368 584 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 ABL2P42684 1182 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 PTGER3P43115 390 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 KCNC1P48547 511 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 SGSHP51688 502 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 MPP7Q5T2T1 576 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 TRIM68Q6AZZ1 485 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 UGT3A1Q6NUS8 523 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 CERS6Q6ZMG9 384 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 LARP4Q71RC2 724 aaKnown RBP eCLIP13.29□□□□□ -0.28
LCMT1-201ENST00000380962 DNAJB7Q7Z6W7 309 aaPredicted RBP13.29□□□□□ -0.28
LCMT1-201ENST00000380962 LPCAT1Q8NF37 534 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 RIN3Q8TB24 985 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 KCNJ9Q92806 393 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.29□□□□□ -0.28
LCMT1-201ENST00000380962 C19orf60Q96EN9 201 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 NSMCE3Q96MG7 304 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 DEFB118Q96PH6 123 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 TTC1Q99614 292 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 ECSITQ9BQ95 431 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 NUSAP1Q9BXS6 441 aaKnown RBP13.29□□□□□ -0.28
LCMT1-201ENST00000380962 MAGEE1Q9HCI5 957 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 PFDN4Q9NQP4 134 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 GKN1Q9NS71 199 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 GEMIN8Q9NWZ8 242 aaKnown RBP13.29□□□□□ -0.28
LCMT1-201ENST00000380962 SPG21Q9NZD8 308 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 LHX3Q9UBR4 397 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 TBX21Q9UL17 535 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 PSMD13Q9UNM6 376 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.29□□□□□ -0.28
LCMT1-201ENST00000380962 TRIM38O00635 465 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 PRRG1O14668 218 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 AZIN1O14977 448 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 SKAP2O75563 359 aaPredicted RBP13.29□□□□□ -0.28
LCMT1-201ENST00000380962 SMNDC1O75940 238 aaKnown RBP eCLIP13.29□□□□□ -0.28
LCMT1-201ENST00000380962 BAG2O95816 211 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 RPS17P08708 135 aaKnown RBP13.29□□□□□ -0.28
LCMT1-201ENST00000380962 PIRTP0C851 137 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 PPM1AP35813 382 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 STX1BP61266 288 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 SMAD3P84022 425 aaKnown RBP13.29□□□□□ -0.28
LCMT1-201ENST00000380962 TWF1Q12792 350 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 TRAF2Q12933 501 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 LCP2Q13094 533 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 FASTKQ14296 549 aaKnown RBP13.29□□□□□ -0.28
LCMT1-201ENST00000380962 OR4D1Q15615 310 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 UGT3A2Q3SY77 523 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 PPM1LQ5SGD2 360 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 KANK2Q63ZY3 851 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 PLCD3Q8N3E9 789 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 CPXM2Q8N436 756 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 FBXO39Q8N4B4 442 aa13.29□□□□□ -0.28
LCMT1-201ENST00000380962 CATSPER1Q8NEC5 780 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms