RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 ADGRE3Q9BY15 652 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 KCNF1Q9H3M0 494 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 DNAJC28Q9NX36 388 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 UBP1Q9NZI7 540 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 DKK4Q9UBT3 224 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 TRHDEQ9UKU6 1024 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 BTBD3Q9Y2F9 522 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 OR1A2Q9Y585 309 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 PCDHB11Q9Y5F2 797 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 PCDHGB2Q9Y5G2 931 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 ADAMTS20P59510 1910 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 ASXL3Q9C0F0 2248 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 A0A0J9YYE9 177 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 SPTY2D1-AS1A0A0U1RR47 76 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 GOLGA6CA6NDK9 693 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 GOLGA6BA6NDN3 693 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 FLRT2O43155 660 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 SIAH2O43255 324 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 PCDHGA12O60330 932 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 TRBC1P01850 177 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 GOLGA6DP0CG33 693 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 GM2AP17900 193 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 ETV3P41162 512 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 TNNT3P45378 269 aaPredicted RBP9.23□□□□□ -0.93
HMGN1-202ENST00000380747 RXRGP48443 463 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 YPEL5P62699 121 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 BNIP3Q12983 259 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 MTM1Q13496 603 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 PTK2BQ14289 1009 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 FZD2Q14332 565 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 INAVAQ3KP66 663 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 CRTC2Q53ET0 693 aaPredicted RBP9.23□□□□□ -0.93
HMGN1-202ENST00000380747 TPRG1LQ5T0D9 272 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 LRRC66Q68CR7 880 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 ITPRIPL1Q6GPH6 555 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 CRTC1Q6UUV9 634 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 Q6ZVL8 140 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 PARGQ86W56 976 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 SLC13A5Q86YT5 568 aaPredicted RBP9.23□□□□□ -0.93
HMGN1-202ENST00000380747 PLA2G15Q8NCC3 412 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 SAP25Q8TEE9 199 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 NUS1Q96E22 293 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 PDLIM2Q96JY6 352 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 FCRL5Q96RD9 977 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 APOOQ9BUR5 198 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 MLPHQ9BV36 600 aaPredicted RBP9.23□□□□□ -0.93
HMGN1-202ENST00000380747 CAAP1Q9H8G2 361 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 TRMT1Q9NXH9 659 aaKnown RBP9.23□□□□□ -0.93
HMGN1-202ENST00000380747 GOLGA6AQ9NYA3 693 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 FAM153AQ9UHL3 310 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 CD84Q9UIB8 345 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 PCOLCE2Q9UKZ9 415 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 DNPEPQ9ULA0 475 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 R3HDM2Q9Y2K5 976 aaKnown RBP9.23□□□□□ -0.93
HMGN1-202ENST00000380747 PPIL1Q9Y3C6 166 aa9.23□□□□□ -0.93
HMGN1-202ENST00000380747 TENM4Q6N022 2769 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 C1orf232A0A0U1RR37 186 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 ANKRD66B4E2M5 251 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 H3BM21 787 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 PSMD11O00231 422 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 CACNB4O00305 520 aaPredicted RBP9.22□□□□□ -0.93
HMGN1-202ENST00000380747 TOR1BO14657 336 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 CLDN7O95471 211 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 NDST3O95803 873 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 SLC4A1P02730 911 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 C1SP09871 688 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 PIRTP0C851 137 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 ZNF30P17039 623 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 HTR1BP28222 390 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 GRK6P43250 576 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 WNT3AP56704 352 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 KLF1Q13351 362 aaPredicted RBP9.22□□□□□ -0.93
HMGN1-202ENST00000380747 PRPSAP1Q14558 356 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 NFATC4Q14934 902 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 TRIP6Q15654 476 aaKnown RBP9.22□□□□□ -0.93
HMGN1-202ENST00000380747 SLC14A2Q15849 920 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 ANKRD20A2Q5SQ80 823 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 FAXCQ5TGI0 409 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 ANKRD20A1Q5TYW2 823 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 ANKRD20A3Q5VUR7 823 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 RAET1GQ6H3X3 334 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 KDELC1Q6UW63 502 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 ENPP7Q6UWV6 458 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 CCNI2Q6ZMN8 369 aaPredicted RBP9.22□□□□□ -0.93
HMGN1-202ENST00000380747 RFLNAQ6ZTI6 216 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 GLRX5Q86SX6 157 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 REXO1L1PQ8IX06 675 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 CBARPQ8N350 705 aaPredicted RBP9.22□□□□□ -0.93
HMGN1-202ENST00000380747 SLC25A41Q8N5S1 370 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 EID2Q8N6I1 236 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 FAM71DQ8N9W8 422 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 IPMKQ8NFU5 416 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 SLC35B2Q8TB61 432 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 CCDC110Q8TBZ0 833 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 CCHCR1Q8TD31 782 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 ATG4AQ8WYN0 398 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 TADA1Q96BN2 335 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 DTD2Q96FN9 168 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 OXNAD1Q96HP4 312 aaPredicted RBP9.22□□□□□ -0.93
HMGN1-202ENST00000380747 MRGPRX2Q96LB1 330 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms