RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 VPS33AQ96AX1 596 aa12.46□□□□□ -0.42
PRPF40B-202ENST00000380281 ALPK1Q96QP1 1244 aa12.46□□□□□ -0.42
PRPF40B-202ENST00000380281 PALMDQ9NP74 551 aa12.46□□□□□ -0.42
PRPF40B-202ENST00000380281 SARS2Q9NP81 518 aaKnown RBP12.46□□□□□ -0.42
PRPF40B-202ENST00000380281 CCL15-CCL14A0A0B4J2E2 113 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 A8MT66 165 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 ARSDP51689 593 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 SELENBP1Q13228 472 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 CCL15Q16663 113 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 ZIK1Q3SY52 487 aaPredicted RBP12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 OTUD3Q5T2D3 398 aaPredicted RBP12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 CYS1Q717R9 158 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 SPPL2BQ8TCT7 592 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 TRUB1Q8WWH5 349 aaKnown RBP12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 EXOC2Q96KP1 924 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 SEMA4BQ9NPR2 832 aaPredicted RBP12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 MARCH4Q9P2E8 410 aaPredicted RBP12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 USP22Q9UPT9 525 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 ATP11BQ9Y2G3 1177 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 PCDHGA7Q9Y5G6 932 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 HEATR9A2RTY3 570 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 CRCPO75575 148 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 SOAT2O75908 522 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 ENO2P09104 434 aaPredicted RBP12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 HSPA8P11142 646 aaKnown RBP12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 FOXA1P55317 472 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 TRIM25Q14258 630 aaKnown RBP12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 OXA1LQ15070 435 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 TIGD5Q53EQ6 642 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 TMEM126BQ8IUX1 230 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 CBR4Q8N4T8 237 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 TUBGCP3Q96CW5 907 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 TINF2Q9BSI4 451 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 C1orf50Q9BV19 199 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 GLOD4Q9HC38 313 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 RIC8BQ9NVN3 520 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 DUS2Q9NX74 493 aaKnown RBP12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 ABI2Q9NYB9 513 aaPredicted RBP12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 KLQ9UEF7 1012 aa12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 PRPF19Q9UMS4 504 aaKnown RBP12.45□□□□□ -0.42
PRPF40B-202ENST00000380281 TRIM38O00635 465 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 CXCL11O14625 94 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 TOR1BO14657 336 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 BCAS2O75934 225 aaPredicted RBP12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 BCL10O95999 233 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 PCNAP12004 261 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 GFAPP14136 432 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 MATN1P21941 496 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 OPRL1P41146 370 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 MAPK11Q15759 364 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 UBXN11Q5T124 520 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 KCTD8Q6ZWB6 473 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 BPIFB6Q8NFQ5 453 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 HMGCLL1Q8TB92 370 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 FAR2Q96K12 515 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 TBATAQ96M53 351 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 PARVBQ9HBI1 364 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 MID1IP1Q9NPA3 183 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 CACNA2D2Q9NY47 1150 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 DKK3Q9UBP4 350 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 PRELID1Q9Y255 219 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 PAPPA2Q9BXP8 1791 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 INPP4BO15327 924 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 ENDOUP21128 410 aaKnown RBP12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 IFITM2Q01629 132 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 SLC10A7Q0GE19 358 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 E2F2Q14209 437 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 MFSD10Q14728 455 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 DUSP28Q4G0W2 176 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 TBCELQ5QJ74 424 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 PIWIL3Q7Z3Z3 882 aaKnown RBP12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 GPR142Q7Z601 462 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 SMOXQ9NWM0 555 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 IPO11Q9UI26 975 aaKnown RBP12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 MID2Q9UJV3 735 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 CARD8Q9Y2G2 431 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 TRAF6Q9Y4K3 522 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 PARP14Q460N5 1801 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 UBXN8O00124 270 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 UBFD1O14562 309 aaKnown RBP12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 ACOT8O14734 319 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 NOL3O60936 208 aaKnown RBP12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 ITGB1P05556 798 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 C8BP07358 591 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 CCNA2P20248 432 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 EEF1B2P24534 225 aaKnown RBP12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 DCKP27707 260 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 HPCAL1P37235 193 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 STX1BP61266 288 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 NAB1Q13506 487 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 BFSP2Q13515 415 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 GALNT3Q14435 633 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 GRB7Q14451 532 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 ZNF792Q3KQV3 632 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 TLK2Q86UE8 772 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 FBXL20Q96IG2 436 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 ANKRD60Q9BZ19 345 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 RNF38Q9H0F5 515 aa12.44□□□□□ -0.42
PRPF40B-202ENST00000380281 PRM3Q9NNZ6 103 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms