RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 GALNT15Q8N3T1 639 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 BTN2A2Q8WVV5 523 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 NCLNQ969V3 563 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 TTC17Q96AE7 1141 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 TLCD1Q96CP7 247 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 TSPAN17Q96FV3 270 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 ZFRQ96KR1 1074 aaKnown RBP6.54□□□□□ -1.36
NEDD9-202ENST00000379446 TGM7Q96PF1 710 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 NR1H4Q96RI1 486 aaPredicted RBP6.54□□□□□ -1.36
NEDD9-202ENST00000379446 ACTR8Q9H981 624 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 IL21RQ9HBE5 538 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 TMPRSS4Q9NRS4 437 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 MIOSQ9NXC5 875 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 WNT16Q9UBV4 365 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 PCDHGC4Q9Y5F7 938 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 ABCA4P78363 2273 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 KITP10721 976 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 RFC1P35251 1148 aaPredicted RBP6.54□□□□□ -1.36
NEDD9-202ENST00000379446 NOVP48745 357 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 CDH4P55283 916 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 CXADRP78310 365 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 DSC1Q08554 894 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 BMPR2Q13873 1038 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 CST6Q15828 149 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 UBXN11Q5T124 520 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 DENND1BQ6P3S1 775 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 C6orf89Q6UWU4 347 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 NPAS3Q8IXF0 933 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 RCOR2Q8IZ40 523 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 MCOLN2Q8IZK6 566 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 ICA1LQ8NDH6 482 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 OR2T3Q8NH03 318 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 RFWD2Q8NHY2 731 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 KCNE4Q8WWG9 221 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 EMID1Q96A84 441 aaPredicted RBP6.54□□□□□ -1.36
NEDD9-202ENST00000379446 LRIG1Q96JA1 1093 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 CASD1Q96PB1 797 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 MYADMQ96S97 322 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 NDNQ99608 321 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 CRISPLD2Q9H0B8 497 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 DMAC2Q9NW81 257 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 DNMT3BQ9UBC3 853 aaKnown RBP6.54□□□□□ -1.36
NEDD9-202ENST00000379446 PCYOX1Q9UHG3 505 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 CDC14AQ9UNH5 594 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 CCDC88AQ3V6T2 1871 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 ARAP2Q8WZ64 1704 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 VSTM5A8MXK1 200 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 KRT37O76014 449 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 CTGFP29279 349 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 PTPN7P35236 360 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 MRPS21P82921 87 aaKnown RBP6.54□□□□□ -1.36
NEDD9-202ENST00000379446 BRMS1LQ5PSV4 323 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 DHRS13Q6UX07 377 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 TRIM42Q8IWZ5 723 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 TCEAL8Q8IYN2 117 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 MINDY1Q8N5J2 469 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 MAML1Q92585 1016 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 MOCOSQ96EN8 888 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 SGF29Q96ES7 293 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 OTUB1Q96FW1 271 aaPredicted RBP6.54□□□□□ -1.36
NEDD9-202ENST00000379446 SERPINB12Q96P63 405 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 DUSP23Q9BVJ7 150 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 ROPN1BQ9BZX4 212 aaPredicted RBP6.54□□□□□ -1.36
NEDD9-202ENST00000379446 ILKAPQ9H0C8 392 aaPredicted RBP6.54□□□□□ -1.36
NEDD9-202ENST00000379446 OR2AG1Q9H205 316 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 EPS8L2Q9H6S3 715 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 ROPN1Q9HAT0 212 aaPredicted RBP6.54□□□□□ -1.36
NEDD9-202ENST00000379446 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.54□□□□□ -1.36
NEDD9-202ENST00000379446 CIDEBQ9UHD4 219 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 POU2F3Q9UKI9 436 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 PCDHGA4Q9Y5G9 962 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 SNX3O60493 162 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 KERAO60938 352 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 BANF1O75531 89 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 CLEC3AO75596 197 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 FTH1P02794 183 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 ABOP16442 354 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 GLDCP23378 1020 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 MC1RQ01726 317 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 LEXMQ3ZCV2 418 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 VWA2Q5GFL6 755 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 CACHD1Q5VU97 1274 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 TLDC1Q6P9B6 456 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 TAS1R1Q7RTX1 841 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 TMEM25Q86YD3 366 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 ZNF248Q8NDW4 579 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 NUS1Q96E22 293 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 BORCS6Q96GS4 357 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 SHCBP1LQ9BZQ2 653 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 MIEF1Q9NQG6 463 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 SLC39A1Q9NY26 324 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-202ENST00000379446 A0A1W2PQ67 120 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 NARSO43776 548 aaKnown RBP6.53□□□□□ -1.36
NEDD9-202ENST00000379446 KRT38O76015 456 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 ATP6V1C1P21283 382 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 RPS21P63220 83 aaKnown RBP6.53□□□□□ -1.36
NEDD9-202ENST00000379446 RAPSNQ13702 412 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 GALNT3Q14435 633 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 ITIH4Q14624 930 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms