RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 PHF12Q96QT6 1004 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 GALPQ9UBC7 116 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 IKZF3Q9UKT9 509 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 SLC4A7Q9Y6M7 1214 aa16.22■□□□□ 0.19
TRIM27-202ENST00000377199 CDC7O00311 574 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 AZIN1O14977 448 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 TRIM24O15164 1050 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 CDH15P55291 814 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 SAMD4BQ5PRF9 694 aaKnown RBP16.21■□□□□ 0.19
TRIM27-202ENST00000377199 KLHDC10Q6PID8 442 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 BEND5Q7L4P6 421 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 ZNF683Q8IZ20 524 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 ZFP28Q8NHY6 868 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 ZFAND2BQ8WV99 257 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 UPF1Q92900 1129 aaKnown RBP eCLIP16.21■□□□□ 0.191e-8■■□□□ 12.6
TRIM27-202ENST00000377199 BHMTQ93088 406 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 ACOX2Q99424 681 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 MYO16Q9Y6X6 1858 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 PLOD2O00469 737 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 MTHFD1P11586 935 aaKnown RBP16.21■□□□□ 0.19
TRIM27-202ENST00000377199 TYMPP19971 482 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 DNAJB1P25685 340 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 HTR7P34969 479 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 RGRP47804 291 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 RPS24P62847 133 aaKnown RBP16.21■□□□□ 0.19
TRIM27-202ENST00000377199 DUSP4Q13115 394 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 SERINC3Q13530 473 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 IKBKEQ14164 716 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 RASAL3Q86YV0 1011 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 IFNL1Q8IU54 200 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 LRRC49Q8IUZ0 686 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 TRIML2Q8N7C3 387 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 UPF3AQ9H1J1 476 aaKnown RBP16.21■□□□□ 0.19
TRIM27-202ENST00000377199 TUBB1Q9H4B7 451 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 SPO11Q9Y5K1 396 aa16.21■□□□□ 0.19
TRIM27-202ENST00000377199 NPEPPSL1A6NEC2 478 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 NME4O00746 187 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 TLR5O60602 858 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 SERPINF2P08697 491 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 NCK1P16333 377 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 TIAL1Q01085 375 aaKnown RBP eCLIP16.2■□□□□ 0.181e-10■■■□□ 14.6
TRIM27-202ENST00000377199 PLA2G4EQ3MJ16 856 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 HMBOX1Q6NT76 420 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 PBXIP1Q96AQ6 731 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 CDK15Q96Q40 435 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 ZIC5Q96T25 663 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 GPR62Q9BZJ7 368 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 PCDHGC4Q9Y5F7 938 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 COMMD3-BMI1R4GMX3 469 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 GOLGA8CPA6NN73 597 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 H3BSA7 217 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 BTN3A1O00481 513 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 VILLO15195 856 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 OR1I1O60431 355 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 KPNA6O60684 536 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 CLIC3O95833 236 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 MTHFD2P13995 350 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 GPX3P22352 226 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 NFE2Q16621 373 aaPredicted RBP16.2■□□□□ 0.18
TRIM27-202ENST00000377199 TBCELQ5QJ74 424 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 NADSYN1Q6IA69 706 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 FBXO39Q8N4B4 442 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 UROC1Q96N76 676 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 GPR21Q99679 349 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 CCT7Q99832 543 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.2■□□□□ 0.18
TRIM27-202ENST00000377199 TBC1D30Q9Y2I9 924 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 SOCS2O14508 198 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 RPP40O75818 363 aaKnown RBP16.2■□□□□ 0.18
TRIM27-202ENST00000377199 FDXRP22570 491 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 PRKCZQ05513 592 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 UGT3A2Q3SY77 523 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 RABL3Q5HYI8 236 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 GLT6D1Q7Z4J2 308 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 MIER2Q8N344 545 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 PCYOX1LQ8NBM8 494 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 LPCAT1Q8NF37 534 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 TMIGD2Q96BF3 282 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 DGCR14Q96DF8 476 aaKnown RBP16.2■□□□□ 0.18
TRIM27-202ENST00000377199 RANBP9Q96S59 729 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 ZBED2Q9BTP6 218 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 LIN28AQ9H9Z2 209 aaKnown RBP16.2■□□□□ 0.18
TRIM27-202ENST00000377199 ZFYVE28Q9HCC9 887 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 MAP10Q9P2G4 905 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 POLG2Q9UHN1 485 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 RNF11Q9Y3C5 154 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 COMMD10Q9Y6G5 202 aa16.2■□□□□ 0.18
TRIM27-202ENST00000377199 hCG_2014768A0A024R1R8 64 aa16.19■□□□□ 0.18
TRIM27-202ENST00000377199 SMIM31A0A1B0GVY4 71 aa16.19■□□□□ 0.18
TRIM27-202ENST00000377199 LOC285095A0A1B0GVY8 99 aa16.19■□□□□ 0.18
TRIM27-202ENST00000377199 CBX4O00257 560 aa16.19■□□□□ 0.18
TRIM27-202ENST00000377199 NDUFS3O75489 264 aa16.19■□□□□ 0.18
TRIM27-202ENST00000377199 PAPSS2O95340 614 aaPredicted RBP16.19■□□□□ 0.18
TRIM27-202ENST00000377199 IRF1P10914 325 aa16.19■□□□□ 0.18
TRIM27-202ENST00000377199 RBBP7Q16576 425 aa16.19■□□□□ 0.18
TRIM27-202ENST00000377199 C16orf59Q7L2K0 433 aa16.19■□□□□ 0.18
TRIM27-202ENST00000377199 ZNF598Q86UK7 904 aaKnown RBP16.19■□□□□ 0.18
TRIM27-202ENST00000377199 NUDT8Q8WV74 236 aa16.19■□□□□ 0.18
TRIM27-202ENST00000377199 CDKN2AIPNLQ96HQ2 116 aa16.19■□□□□ 0.18
TRIM27-202ENST00000377199 TEX37Q96LM6 180 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms