RNA–Protein interactions for RNA: ENST00000377153.5

UBE4B-203, Transcript of ubiquitination factor E4B, humanhuman

TSL 3 BASIC

Gene UBE4B, Length 1,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-203ENST00000377153 ZSCAN5AQ9BUG6 496 aa14.46□□□□□ -0.09
UBE4B-203ENST00000377153 RIOK2Q9BVS4 552 aaKnown RBP14.46□□□□□ -0.09
UBE4B-203ENST00000377153 ABCG8Q9H221 673 aa14.46□□□□□ -0.09
UBE4B-203ENST00000377153 SLC32A1Q9H598 525 aa14.46□□□□□ -0.09
UBE4B-203ENST00000377153 ETNK1Q9HBU6 452 aa14.46□□□□□ -0.09
UBE4B-203ENST00000377153 EIF2B3Q9NR50 452 aaKnown RBP14.46□□□□□ -0.09
UBE4B-203ENST00000377153 KLQ9UEF7 1012 aa14.46□□□□□ -0.09
UBE4B-203ENST00000377153 PCDHGB2Q9Y5G2 931 aa14.46□□□□□ -0.09
UBE4B-203ENST00000377153 SPO11Q9Y5K1 396 aa14.46□□□□□ -0.09
UBE4B-203ENST00000377153 TDRD6O60522 2096 aaKnown RBP14.46□□□□□ -0.09
UBE4B-203ENST00000377153 K7ESM1 405 aa14.45□□□□□ -0.1
UBE4B-203ENST00000377153 KIF2AO00139 706 aaPredicted RBP14.45□□□□□ -0.1
UBE4B-203ENST00000377153 AP3B1O00203 1094 aa14.45□□□□□ -0.1
UBE4B-203ENST00000377153 STX7O15400 261 aaKnown RBP14.45□□□□□ -0.1
UBE4B-203ENST00000377153 RASGRP1O95267 797 aa14.45□□□□□ -0.1
UBE4B-203ENST00000377153 KRT14P02533 472 aa14.45□□□□□ -0.1
UBE4B-203ENST00000377153 ETS1P14921 441 aa14.45□□□□□ -0.1
UBE4B-203ENST00000377153 NME1P15531 152 aaKnown RBP14.45□□□□□ -0.1
UBE4B-203ENST00000377153 RPL22P35268 128 aaKnown RBP14.45□□□□□ -0.1
UBE4B-203ENST00000377153 HNRNPKP61978 463 aaKnown RBP eCLIP14.45□□□□□ -0.1
UBE4B-203ENST00000377153 CDK3Q00526 305 aa14.45□□□□□ -0.1
UBE4B-203ENST00000377153 PPARDQ03181 441 aa14.45□□□□□ -0.1
UBE4B-203ENST00000377153 CDH17Q12864 832 aa14.45□□□□□ -0.1
UBE4B-203ENST00000377153 FZD2Q14332 565 aa14.45□□□□□ -0.1
UBE4B-203ENST00000377153 SPARCL1Q14515 664 aa14.45□□□□□ -0.1
UBE4B-203ENST00000377153 TAF1AQ15573 450 aaPredicted RBP14.45□□□□□ -0.1
UBE4B-203ENST00000377153 CDKN3Q16667 212 aa14.45□□□□□ -0.1
UBE4B-203ENST00000377153 ALS2CLQ60I27 953 aa14.45□□□□□ -0.1
UBE4B-203ENST00000377153 KCTD11Q693B1 232 aa14.45□□□□□ -0.1
UBE4B-203ENST00000377153 KDM7AQ6ZMT4 941 aa14.45□□□□□ -0.1
UBE4B-203ENST00000377153 TMC3Q7Z5M5 1100 aa14.45□□□□□ -0.1
UBE4B-203ENST00000377153 NAXDQ8IW45 347 aa14.45□□□□□ -0.1
UBE4B-203ENST00000377153 KLHDC8BQ8IXV7 354 aa14.45□□□□□ -0.1
UBE4B-203ENST00000377153 CBARPQ8N350 705 aaPredicted RBP14.45□□□□□ -0.1
UBE4B-203ENST00000377153 SETD7Q8WTS6 366 aaKnown RBP14.45□□□□□ -0.1
UBE4B-203ENST00000377153 SCAMP4Q969E2 229 aa14.45□□□□□ -0.1
UBE4B-203ENST00000377153 PLEKHG4BQ96PX9 1271 aa14.45□□□□□ -0.1
UBE4B-203ENST00000377153 SPATA16Q9BXB7 569 aa14.45□□□□□ -0.1
UBE4B-203ENST00000377153 SLC13A1Q9BZW2 595 aa14.45□□□□□ -0.1
UBE4B-203ENST00000377153 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.45□□□□□ -0.1
UBE4B-203ENST00000377153 NFKBIL1Q9UBC1 381 aaPredicted RBP14.45□□□□□ -0.1
UBE4B-203ENST00000377153 APOBEC3BQ9UH17 382 aaKnown RBP14.45□□□□□ -0.1
UBE4B-203ENST00000377153 COL5A1P20908 1838 aaPredicted RBP14.44□□□□□ -0.1
UBE4B-203ENST00000377153 CCDC188H7C350 402 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 CSF2P04141 144 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 HOXC4P09017 264 aaPredicted RBP14.44□□□□□ -0.1
UBE4B-203ENST00000377153 ZSCAN5DPP0CG00 497 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 JUNDP17535 347 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 TRIM23P36406 574 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 SPAM1P38567 509 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 GRK6P43250 576 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 RXRGP48443 463 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 VPS41P49754 854 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 SARNPP82979 210 aaKnown RBP14.44□□□□□ -0.1
UBE4B-203ENST00000377153 GPS1Q13098 491 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 LAMB3Q13751 1172 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 SEPT6Q14141 434 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 PUM1Q14671 1186 aaKnown RBP eCLIP14.44□□□□□ -0.1
UBE4B-203ENST00000377153 PRAMEF14Q5SWL7 426 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 HENMT1Q5T8I9 393 aaKnown RBP14.44□□□□□ -0.1
UBE4B-203ENST00000377153 PDPK2PQ6A1A2 396 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 TTC27Q6P3X3 843 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 ENPP7Q6UWV6 458 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 ADAMTSL4Q6UY14 1074 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 PRUNE1Q86TP1 453 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 NLRP8Q86W28 1048 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 PHACTR4Q8IZ21 702 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 GLIS1Q8NBF1 620 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 OR56A4Q8NGH8 313 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 BRSK1Q8TDC3 778 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 FUBP1Q96AE4 644 aaKnown RBP14.44□□□□□ -0.1
UBE4B-203ENST00000377153 HIC2Q96JB3 615 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 TEX101Q9BY14 249 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 DDX47Q9H0S4 455 aaKnown RBP14.44□□□□□ -0.1
UBE4B-203ENST00000377153 ARNT2Q9HBZ2 717 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 SPASTQ9UBP0 616 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 MOSPD1Q9UJG1 213 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 CEP250Q9BV73 2442 aa14.44□□□□□ -0.1
UBE4B-203ENST00000377153 ASCC3Q8N3C0 2202 aaKnown RBP14.43□□□□□ -0.1
UBE4B-203ENST00000377153 NEMP2A6NFY4 417 aa14.43□□□□□ -0.1
UBE4B-203ENST00000377153 INPP4BO15327 924 aa14.43□□□□□ -0.1
UBE4B-203ENST00000377153 SDC3O75056 442 aa14.43□□□□□ -0.1
UBE4B-203ENST00000377153 SUN1O94901 812 aa14.43□□□□□ -0.1
UBE4B-203ENST00000377153 TUBB4AP04350 444 aa14.43□□□□□ -0.1
UBE4B-203ENST00000377153 ALPPL2P10696 532 aa14.43□□□□□ -0.1
UBE4B-203ENST00000377153 LPOP22079 712 aaPredicted RBP14.43□□□□□ -0.1
UBE4B-203ENST00000377153 KCNA4P22459 653 aa14.43□□□□□ -0.1
UBE4B-203ENST00000377153 ID4P47928 161 aa14.43□□□□□ -0.1
UBE4B-203ENST00000377153 OLIG2Q13516 323 aa14.43□□□□□ -0.1
UBE4B-203ENST00000377153 ITGA9Q13797 1035 aa14.43□□□□□ -0.1
UBE4B-203ENST00000377153 TRIP13Q15645 432 aaPredicted RBP14.43□□□□□ -0.1
UBE4B-203ENST00000377153 ZNF542PQ5EBM4 170 aa14.43□□□□□ -0.1
UBE4B-203ENST00000377153 RFLNAQ6ZTI6 216 aa14.43□□□□□ -0.1
UBE4B-203ENST00000377153 NYAP1Q6ZVC0 841 aa14.43□□□□□ -0.1
UBE4B-203ENST00000377153 CREG2Q8IUH2 290 aa14.43□□□□□ -0.1
UBE4B-203ENST00000377153 PHYKPLQ8IUZ5 450 aa14.43□□□□□ -0.1
UBE4B-203ENST00000377153 HID1Q8IV36 788 aa14.43□□□□□ -0.1
UBE4B-203ENST00000377153 TRAM1L1Q8N609 369 aa14.43□□□□□ -0.1
UBE4B-203ENST00000377153 BPIFA1Q9NP55 256 aa14.43□□□□□ -0.1
UBE4B-203ENST00000377153 GLYATL1P3A0A0U1RQE8 302 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms